RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Kcna3P16390 528 aa16.21■□□□□ 0.19
Upf1-202ENSMUST00000215817 Cd68P31996 326 aa16.21■□□□□ 0.19
Upf1-202ENSMUST00000215817 Opa1P58281 960 aa16.21■□□□□ 0.19
Upf1-202ENSMUST00000215817 Tbx3P70324 741 aa16.21■□□□□ 0.19
Upf1-202ENSMUST00000215817 Grik5Q61626 979 aa16.21■□□□□ 0.19
Upf1-202ENSMUST00000215817 Mical2Q8BML1 960 aa16.21■□□□□ 0.19
Upf1-202ENSMUST00000215817 Tmem132cQ8CEF9 1099 aa16.21■□□□□ 0.19
Upf1-202ENSMUST00000215817 Cgref1Q8R1U2 281 aa16.21■□□□□ 0.19
Upf1-202ENSMUST00000215817 Lrrc71Q9D3W5 558 aa16.21■□□□□ 0.19
Upf1-202ENSMUST00000215817 Ddx24Q9ESV0 857 aaKnown RBP16.21■□□□□ 0.19
Upf1-202ENSMUST00000215817 Lmnb2P21619 596 aaKnown RBP16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Rad54lP70270 747 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Samd11Q1RNF8 542 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Ice2Q3UZ18 988 aaKnown RBP16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Cdc23Q8BGZ4 597 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Fra10ac1Q8BP78 315 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Tom1l1Q923U0 474 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Prdm12A2AJ77 365 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Odc1P00860 461 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 AlbP07724 608 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Hsph1Q61699 858 aaKnown RBP16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Dusp11Q6NXK5 321 aaKnown RBP16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Kif11Q6P9P6 1052 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Arhgef18Q6P9R4 1021 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Tubb2aQ7TMM9 445 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Tmem145Q8C4U2 746 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 AclyQ91V92 1091 aaKnown RBP16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Tas1r1Q99PG6 842 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Tubb2bQ9CWF2 445 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Eef1akmt2Q9D853 244 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Uchl3Q9JKB1 230 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Nek3Q9R0A5 511 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Pgap3A2A559 320 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Gm21973F6WEZ7 68 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Mroh4G3X8W1 983 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Ppp3caP63328 521 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 CkbQ04447 381 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Fam193bQ3U2K0 892 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Tmem26Q3UP23 366 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Skap1Q3UUV5 355 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Cyfip2Q5SQX6 1253 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Nfe2l2Q60795 597 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Znf532Q6NXK2 1036 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Gm5622Q810Q0 167 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 1700017N19RikA0A087WPJ1 469 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Cyp2b13A6H6J2 491 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Psg29Q3URN6 468 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Cct6bQ61390 531 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Snx17Q8BVL3 470 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Ccz1Q8C1Y8 480 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Tmem161bQ8C2L6 487 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Trib2Q8K4K3 343 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 AagabQ8R2R3 316 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Usp11Q99K46 921 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Mrpl4Q9DCU6 294 aaKnown RBP16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Rassf7Q9DD19 359 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Ppp2r3cQ9JK24 453 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Krt16Q9Z2K1 469 aa16.2■□□□□ 0.18
Upf1-202ENSMUST00000215817 Dennd5bA2RSQ0 1274 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Gcnt4E9Q649 455 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 UrosP51163 265 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Serpina1eQ00898 413 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Ddx3yQ62095 658 aaKnown RBP16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Trim37Q6PCX9 961 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Eif3cQ8R1B4 911 aaKnown RBP16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Adgrf4Q9D2L6 698 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Arid3bQ9Z1N7 568 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Rnf19bA2A7Q9 732 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Speer4f2E9Q366 295 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Dhx15O35286 795 aaKnown RBP16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Hes2O54792 157 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Eef1dP57776 281 aaKnown RBP16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 IqcmQ149I8 489 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Ptcd3Q14C51 685 aaKnown RBP16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Snx27Q3UHD6 539 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Msantd2Q6NZR2 559 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Q80Y73 168 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Taf2Q8C176 1104 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Amer2Q8CCJ4 672 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Gbp5Q8CFB4 590 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Chn1Q91V57 459 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Slc12a9Q99MR3 914 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Q9D4A5 307 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Dcaf6Q9DC22 876 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Igdcc4Q9EQS9 1252 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Stk11Q9WTK7 436 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Wdr46Q9Z0H1 622 aaKnown RBP16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 CntrlA2AL36 2334 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Rhox3cA2AWM0 215 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Rhox3hL7MU37 215 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Tmem35bQ3U0Y2 150 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Ndst1Q3UHN9 882 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Rhox3aQ4TU90 215 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 DstykQ6XUX1 927 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Sh3tc2Q80VA5 1289 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Zdhhc14Q8BQQ1 489 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Kat5Q8CHK4 513 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Appl1Q8K3H0 707 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Sh2b1Q91ZM2 756 aa16.19■□□□□ 0.18
Upf1-202ENSMUST00000215817 Scyl3Q9DBQ7 735 aa16.19■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms