RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Ptpn5P54830 541 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Wfs1P56695 890 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Rcn1Q05186 325 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 TsnQ62348 228 aaKnown RBP9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Xpo1Q6P5F9 1071 aaKnown RBP9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Nxf7Q80SZ6 620 aaKnown RBP9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Exo5Q9CXP9 373 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Tubgcp4Q9D4F8 667 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Vmn2r5K7N788 911 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Ctnnal1O88327 731 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Tcea3P23881 347 aaKnown RBP9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Galnt3P70419 633 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Serping1P97290 504 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Krt35Q497I4 455 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Thrap3Q569Z6 951 aaKnown RBP9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Ush1gQ80T11 461 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Slc9a7Q8BLV3 726 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Osbpl2Q8BX94 484 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 AgpsQ8C0I1 645 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Tmem132cQ8CEF9 1099 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Depdc7Q91WS7 511 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Lrrc49Q91YK0 686 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Ifrd2Q9D8U0 441 aa9.74□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Vti1bO88384 232 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Itm2bO89051 266 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Gnrh1P13562 90 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Gpr162Q3UN16 588 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Exoc3l4Q6DIA2 721 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 KhnynQ80U38 671 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Zfp113Q8C689 439 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Pnma3Q8JZW8 466 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Cadm1Q8R5M8 456 aaKnown RBP9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Tesk2Q8VCT9 570 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Olfr1414Q8VGU5 312 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Mccc1Q99MR8 717 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Slxl1Q9D515 155 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 H2afyQ9QZQ8 372 aaKnown RBP9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Rfx8D3YU81 596 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Slc35g2D3YVE8 412 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Gm3182K7N6T8 263 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Psmd7P26516 321 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Actr2P61161 394 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 YwhaqP68254 245 aaKnown RBP9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Nutm2Q3V0C3 733 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Nr0b1Q61066 472 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Nlrp9cQ66X01 1004 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Rbm12b1Q80YR9 836 aaKnown RBP9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 TbcdQ8BYA0 1196 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Cdc73Q8JZM7 531 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Abca5Q8K448 1642 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Adgrl2Q8JZZ7 1487 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Gm21964A0A1W2P7S4 437 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Rgs2O08849 211 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Pex5O09012 639 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Zbtb7aO88939 569 aaKnown RBP9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Pou6f1Q07916 301 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 9130409I23RikQ3TS87 320 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Hmgxb4Q80Y32 594 aaKnown RBP9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Pnma2Q8BHK0 365 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Dpp9Q8BVG4 862 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Znf451Q8C0P7 1056 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Apol9bQ8C7I4 310 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Apol9aQ8VDU3 310 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Lrrc17Q9CXD9 443 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Q9D1F3 157 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Cyp3a44Q9EQW4 504 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Pidd1Q9ERV7 915 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Doc2gQ9ESN1 387 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Ifi213D3Z5G0 586 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Nr1i3O35627 358 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Tpst1O70281 370 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Hsd17b4P51660 735 aaKnown RBP9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Gm10392Q3V3I3 114 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Colgalt2Q6NVG7 625 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Tbc1d10bQ8BHL3 798 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Znf24Q91VN1 368 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Nr2e3Q9QXZ7 395 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 GdaQ9R111 454 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Plekhg1F6S200 1446 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 PtprgQ05909 1442 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Rnf19bA2A7Q9 732 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 EXOC1LB9EK06 172 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Akt1P31750 480 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Pold1P52431 1105 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Serpinb6dQ3UWK8 375 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Teddm1bQ8CC62 306 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Magi2Q9WVQ1 1275 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Acad12D3Z7X0 555 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Aldh3a2P47740 484 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Flt3Q00342 1000 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Hoxa13Q62424 386 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Chsy1Q6ZQ11 800 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Myl12aQ6ZWQ9 172 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Rasgrp4Q8BTM9 673 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Znrd1-asQ8R0E5 213 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Igf2bp3Q9CPN8 579 aaKnown RBP9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Vav3Q9R0C8 847 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Orc6Q9WUJ8 262 aa9.73□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Ces1bD3Z5G7 567 aa9.72□□□□□ -0.85
Col6a5-201ENSMUST00000165165 Kcnh2O35219 1162 aa9.72□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms