RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Pkn1P70268 946 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 March5Q3KNM2 278 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Zfp658Q5PPQ4 887 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Gga1Q8R0H9 635 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Tc2nQ91XT6 489 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 1700020D05RikQ99PB1 294 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Gdap2Q9DBL2 498 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Rnf25Q9QZR0 456 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Col4a6B1AVK5 1691 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Ppfia4B8QI36 1187 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Acp4D3YTS9 425 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Gm281D3Z1Y0 860 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Zfp408H7BX78 710 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Ass1P16460 412 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Myo1fP70248 1099 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Snx19Q6P4T1 997 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 PdxkQ8K183 312 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Vps36Q91XD6 386 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Pip4k2cQ91XU3 421 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Slc13a3Q91Y63 600 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 MlklQ9D2Y4 472 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 MesdQ9ERE7 224 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Znf354bQ9QXT9 601 aa21.31■■□□□ 1
Lig3-204ENSMUST00000131537 Axin1O35625 863 aa21.3■■□□□ 1
Lig3-204ENSMUST00000131537 FechP22315 420 aaKnown RBP21.3■■□□□ 1
Lig3-204ENSMUST00000131537 Trim72Q1XH17 477 aa21.3■■□□□ 1
Lig3-204ENSMUST00000131537 UrgcpQ5NCI0 926 aa21.3■■□□□ 1
Lig3-204ENSMUST00000131537 Zfp251Q6PCX8 632 aa21.3■■□□□ 1
Lig3-204ENSMUST00000131537 Arid5bQ8BM75 1188 aaKnown RBP21.3■■□□□ 1
Lig3-204ENSMUST00000131537 Ube2sQ921J4 223 aa21.3■■□□□ 1
Lig3-204ENSMUST00000131537 Rnf186Q9D241 226 aa21.3■■□□□ 1
Lig3-204ENSMUST00000131537 Rnf138rt1Q9D9M9 248 aa21.3■■□□□ 1
Lig3-204ENSMUST00000131537 Dkc1Q9ESX5 509 aaKnown RBP21.3■■□□□ 1
Lig3-204ENSMUST00000131537 Rfc2Q9WUK4 349 aaKnown RBP21.3■■□□□ 1
Lig3-204ENSMUST00000131537 Plxna1P70206 1894 aa21.3■■□□□ 1
Lig3-204ENSMUST00000131537 Dpy19l4A2AJQ3 722 aa21.29■■□□□ 1
Lig3-204ENSMUST00000131537 Gm12394A2AKP6 982 aa21.29■■□□□ 1
Lig3-204ENSMUST00000131537 Olfr552E9Q545 317 aa21.29■■□□□ 1
Lig3-204ENSMUST00000131537 Vmn2r19G5E8G4 854 aa21.29■■□□□ 1
Lig3-204ENSMUST00000131537 Rdh7O88451 316 aa21.29■■□□□ 1
Lig3-204ENSMUST00000131537 Serpinh1P19324 417 aaKnown RBP21.29■■□□□ 1
Lig3-204ENSMUST00000131537 Gpbp1l1Q6NZP2 473 aa21.29■■□□□ 1
Lig3-204ENSMUST00000131537 Pwp2Q8BU03 919 aaKnown RBP21.29■■□□□ 1
Lig3-204ENSMUST00000131537 Tbc1d22aQ8R5A6 516 aa21.29■■□□□ 1
Lig3-204ENSMUST00000131537 Lrrc46Q9DAP0 323 aa21.29■■□□□ 1
Lig3-204ENSMUST00000131537 Abcb5B5X0E4 1255 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Dcpp3L7N259 170 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Cyp2b9P12790 491 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Resp18P47939 175 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Vamp7P70280 220 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Ovgp1Q62010 721 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Shkbp1Q6P7W2 704 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Kcnt1Q6ZPR4 1224 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Polr2eQ80UW8 210 aaKnown RBP21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Acad11Q80XL6 779 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Abraxas1Q8BPZ8 407 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Acvr1cQ8K348 493 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Prrg2Q8R182 198 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Mageb16Q9CWV4 363 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Mzb1Q9D8I1 188 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Plin4O88492 1403 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Dennd5bA2RSQ0 1274 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Tnfrsf18O35714 228 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Abcd1P48410 736 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Tpm1P58771 284 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Ptgs2Q05769 604 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Bicdl2Q8CHW5 507 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Nop14Q8R3N1 860 aaKnown RBP21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Pcyox1Q9CQF9 505 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 CactinQ9CS00 772 aaKnown RBP21.28■■□□□ 1
Lig3-204ENSMUST00000131537 MajinQ9D992 256 aa21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Uso1Q9Z1Z0 959 aaKnown RBP21.28■■□□□ 1
Lig3-204ENSMUST00000131537 Lmod3E9QA62 571 aa21.27■■□□□ 1
Lig3-204ENSMUST00000131537 Grem1O70326 184 aa21.27■■□□□ 1
Lig3-204ENSMUST00000131537 Ugt1a2P70691 533 aa21.27■■□□□ 1
Lig3-204ENSMUST00000131537 Klra9Q2TJJ8 266 aa21.27■■□□□ 1
Lig3-204ENSMUST00000131537 Ugt1a9Q62452 528 aa21.27■■□□□ 1
Lig3-204ENSMUST00000131537 Ugt1a1Q63886 535 aa21.27■■□□□ 1
Lig3-204ENSMUST00000131537 Dnajc16Q80TN4 772 aa21.27■■□□□ 1
Lig3-204ENSMUST00000131537 Cct8l1Q80YT3 562 aa21.27■■□□□ 1
Lig3-204ENSMUST00000131537 Tceal5Q8CCT4 200 aa21.27■■□□□ 1
Lig3-204ENSMUST00000131537 Gtpbp10Q8K013 366 aa21.27■■□□□ 1
Lig3-204ENSMUST00000131537 Tmem30aQ8VEK0 364 aa21.27■■□□□ 1
Lig3-204ENSMUST00000131537 Afg3l1Q920A7 789 aaKnown RBP21.27■■□□□ 1
Lig3-204ENSMUST00000131537 Spg21Q9CQC8 308 aa21.27■■□□□ 1
Lig3-204ENSMUST00000131537 Gm4924A0A1B0GR71 966 aa21.26■□□□□ 0.99
Lig3-204ENSMUST00000131537 Sec14l1A8Y5H7 715 aa21.26■□□□□ 0.99
Lig3-204ENSMUST00000131537 BhmtO35490 407 aaKnown RBP21.26■□□□□ 0.99
Lig3-204ENSMUST00000131537 Abcb1bP06795 1276 aa21.26■□□□□ 0.99
Lig3-204ENSMUST00000131537 Senp1P59110 640 aa21.26■□□□□ 0.99
Lig3-204ENSMUST00000131537 Krt15Q61414 452 aa21.26■□□□□ 0.99
Lig3-204ENSMUST00000131537 Abcf1Q6P542 837 aaKnown RBP21.26■□□□□ 0.99
Lig3-204ENSMUST00000131537 Olfr1105Q7TR58 312 aa21.26■□□□□ 0.99
Lig3-204ENSMUST00000131537 PdhxQ8BKZ9 501 aa21.26■□□□□ 0.99
Lig3-204ENSMUST00000131537 EmsyQ8BMB0 1264 aaKnown RBP21.26■□□□□ 0.99
Lig3-204ENSMUST00000131537 Pyhin1Q8BV49 420 aa21.26■□□□□ 0.99
Lig3-204ENSMUST00000131537 Uroc1Q8VC12 676 aa21.26■□□□□ 0.99
Lig3-204ENSMUST00000131537 Cbwd1Q8VEH6 393 aa21.26■□□□□ 0.99
Lig3-204ENSMUST00000131537 Q922C1 641 aa21.26■□□□□ 0.99
Lig3-204ENSMUST00000131537 GatmQ9D964 423 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms