RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 ClasrpQ8CFC7 668 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Fubp1Q91WJ8 651 aaKnown RBP16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Kdm8Q9CXT6 414 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Rtn3Q9ES97 964 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Tmod3Q9JHJ0 352 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Pdzd4Q9QY39 772 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 Spata31d1aE9QA35 1336 aa16.88■□□□□ 0.29
Trim39-203ENSMUST00000113706 PtpreP49446 699 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Mybl1P51960 751 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Ppp1r7Q3UM45 361 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Q8BGC1 442 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 SfpqQ8VIJ6 699 aaKnown RBP16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 PpanQ91YU8 470 aaKnown RBP16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Q922C1 641 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Cdc42ep5Q9Z0X0 150 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Trim30cD3YVI9 513 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Ptp4a2O70274 167 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Nr3c1P06537 783 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Spink5Q148R4 1017 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Hdgfl1Q2VPR5 283 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Znf583Q3V080 568 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Zrsr2Q62377 462 aaKnown RBP16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 C6.1alQ7M757 291 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Tsnaxip1Q99P25 704 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Mbtps1Q9WTZ2 1052 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Lrrc74aA0A1Y7VMD6 494 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Gm27029A2A4P4 543 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Scp2P32020 547 aaKnown RBP16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 HelqQ2VPA6 1069 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Zmym1Q3TJB1 983 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Fam193bQ3U2K0 892 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Ppp4r3cQ3V0Y1 813 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Mpzl3Q3V3F6 237 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Suz12Q80U70 741 aaKnown RBP16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Kct2Q8K201 259 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Tm4sf4Q91XD3 202 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Morc1Q9WVL5 950 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Cd97Q9Z0M6 818 aa16.87■□□□□ 0.29
Trim39-203ENSMUST00000113706 Scn1aA2APX8 2009 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Ttll8A4Q9F1 832 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Impa1O55023 277 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Opa1P58281 960 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Ctnna2Q61301 953 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Vat1lQ80TB8 417 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Fam177a1Q8BR63 207 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Lrrc4cQ8C031 640 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Thumpd2Q9CZB3 528 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Rsph3bQ9DA80 389 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Zfyve19Q9DAZ9 389 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Cog1Q9Z160 980 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Tanc1Q0VGY8 1856 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Prdm15E9Q8T2 1174 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Gdap1O88741 358 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Cdh8P97291 799 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Tspyl3Q3UYP3 334 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Lilrb4Q64281 335 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Tdpoz2Q717B2 364 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Olfr385Q8VGT1 312 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 CtsqQ91ZF4 343 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Polr3eQ9CZT4 710 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 SyncQ9EPM5 470 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Fbxo16Q9QZM9 334 aa16.86■□□□□ 0.29
Trim39-203ENSMUST00000113706 Znf804aA2AKY4 1200 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Lrrc63A6H694 637 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 PtprcP06800 1291 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Tap2P36371 702 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Mybpc2Q5XKE0 1136 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Six1Q62231 284 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 LgsnQ8CIX8 563 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Asb7Q91ZU0 318 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Kcnd2Q9Z0V2 630 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Sbf1Q6ZPE2 1867 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Gimd1E9PW74 217 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Trap1aP19473 224 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 PkmP52480 531 aaKnown RBP16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Olfr23Q7TRX4 325 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Fam43aQ8BUP8 424 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Syt15Q8C6N3 418 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Fermt3Q8K1B8 665 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Pold3Q9EQ28 462 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Cfap221A9Q751 836 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Lrriq3Q14DL3 633 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Srrm1Q52KI8 946 aaKnown RBP16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Zbtb17Q60821 794 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 GmipQ6PGG2 971 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Crybg3Q80W49 1005 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 VcpkmtQ8C436 228 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Drc3Q9D5E4 523 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 3830403N18RikQ9D6C3 208 aa16.85■□□□□ 0.29
Trim39-203ENSMUST00000113706 Gm12394A2AKP6 982 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Dpysl4O35098 572 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Krt13P08730 437 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Oca2Q62052 833 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Q6GQV0 436 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Csde1Q91W50 798 aaKnown RBP16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Chst7Q9EP78 484 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 R3hdm1E9Q9Q2 1135 aaKnown RBP16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Birc5O70201 140 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 PrphP15331 475 aa16.84■□□□□ 0.29
Trim39-203ENSMUST00000113706 Hoxb13P70321 286 aa16.84■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms