RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 DaglbQ91WC9 669 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Usp11Q99K46 921 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Tex9Q9D845 387 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Cst12Q9DAN8 128 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Plcg1Q62077 1302 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Plekhg4A0A1L1SU27 1217 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Pgap3A2A559 320 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 TxkP42682 527 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Rfx2P48379 717 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Sox10Q04888 466 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Snx19Q6P4T1 997 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Ccdc117Q6PB51 277 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Slitrk1Q810C1 696 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 B3glctQ8BHT6 489 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Znf879Q8BI99 563 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Tmco6Q8BQX5 494 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Uba6Q8C7R4 1053 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Kdm1bQ8CIG3 826 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Thoc1Q8R3N6 657 aaKnown RBP13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Tbrg4Q91YM4 630 aaKnown RBP13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Sapcd2Q9D818 391 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Clcn2Q9R0A1 908 aa13.66□□□□□ -0.22
Nup88-203ENSMUST00000108531 Myh9Q8VDD5 1960 aaKnown RBP13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Lrrc63A6H694 637 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Vwa5b1A9Z1V5 1215 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Pde8aO88502 823 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 PrkceP16054 737 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Akr1b7P21300 316 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Eepd1Q3TGW2 569 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Smyd5Q3TYX3 416 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 C2cd5Q7TPS5 1016 aaKnown RBP13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Tmem145Q8C4U2 746 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Proser2Q8C5R2 471 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Ago2Q8CJG0 860 aaKnown RBP13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 McmbpQ8R3C0 642 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Gbp7Q91Z40 638 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Chordc1Q9D1P4 331 aaKnown RBP13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Clec4aQ9QZ15 238 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 SufuQ9Z0P7 484 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Arih1Q9Z1K5 555 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Cacna1fQ9JIS7 1985 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 TroapB7ZNG4 668 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Tlk2O55047 718 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 PrkchP23298 683 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Klrb1Q0ZUP1 214 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Ccdc110Q3V125 848 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Gm13103Q4VAD2 491 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Tcf4Q60722 670 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Cyfip1Q7TMB8 1253 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Fam185aQ7TPD2 378 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Sestd1Q80UK0 696 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Naa25Q8BWZ3 972 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Fbxl13Q8CDU4 790 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Col23a1Q8K4G2 532 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 OlahQ8R197 265 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Ces1fQ91WU0 561 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Rin1Q921Q7 763 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Dnajc18Q9CZJ9 357 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Mphosph6Q9D1Q1 161 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 1700016D06RikQ9DAA5 166 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Gyg1Q9R062 333 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 Anapc7Q9WVM3 565 aa13.65□□□□□ -0.22
Nup88-203ENSMUST00000108531 FscbA1EGX6 1074 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Tldc2A2ACG1 198 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 ZfxP17012 799 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 VegfaQ00731 214 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ppp1r12cQ3UMT1 782 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Zfp953Q3UPV7 304 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Adamts18Q4VC17 1219 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Acbd3Q8BMP6 525 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Sh3rf3Q8C120 878 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Rpn1Q91YQ5 608 aaKnown RBP13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mrps22Q9CXW2 359 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Terb2Q9D494 218 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Rsc1a1Q9ER99 582 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Dkc1Q9ESX5 509 aaKnown RBP13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Lonrf1D3YY23 762 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Rpl7aP12970 266 aaKnown RBP13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ect2Q07139 913 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Col9a2Q07643 688 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Pou6f1Q07916 301 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Gm5168Q4KL04 211 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Vmn2r26Q6TAC4 855 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Camta2Q80Y50 1208 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ccdc28bQ8CEG5 200 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Spns2Q91VM4 549 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Nsmce1Q9D720 266 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 CsadQ9DBE0 493 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mical3Q8CJ19 1993 aa13.64□□□□□ -0.23
Nup88-203ENSMUST00000108531 Itga9B8JK39 1036 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Pagr1bF6V0H0 108 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 GnazO70443 355 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Shoc2O88520 582 aaKnown RBP13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Nub1P54729 614 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Bace1P56818 501 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Uhmk1P97343 419 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Casp7P97864 303 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 VcpQ01853 806 aaKnown RBP13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Srebf2Q3U1N2 1130 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Nt5dc3Q3UHB1 546 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms