RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Ccdc62E9PVD1 701 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Gnat1P20612 350 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Foxn1Q61575 648 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Clec4gQ8BNX1 294 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Zmym6Q8BS54 1249 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Slx1bQ8BX32 270 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Grin3bQ91ZU9 1003 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 OoepQ9CWE6 164 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Tp53P02340 387 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Dpf2Q61103 391 aaKnown RBP16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Ppp1r12bQ8BG95 976 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Rhpn2Q8BWR8 686 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 OtoaQ8K561 1137 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Gm28036V9GXJ1 658 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Casq2O09161 415 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 C2P21180 760 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Tlx1P43345 332 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Sat1P48026 171 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 LtbrP50284 415 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Ndufs6P52503 116 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Spata5Q3UMC0 893 aaKnown RBP16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Ddx42Q810A7 929 aaKnown RBP16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Cox18Q8VC74 331 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Dnajc3Q91YW3 504 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Abcf2Q99LE6 628 aaKnown RBP16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Mrpl2Q9D773 306 aaKnown RBP16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Slc40a1Q9JHI9 570 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Rps6P62754 249 aaKnown RBP16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Wbp4Q61048 376 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Map3k10Q66L42 940 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Tspyl5Q69ZB3 406 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Trim47Q8C0E3 641 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Prmt7Q922X9 692 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Dach2Q925Q8 634 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Trim12aQ99PQ1 284 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Kif19Q99PT9 997 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Wars2Q9CYK1 360 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 MkksQ9JI70 570 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Cdc42ep4Q9JM96 349 aaKnown RBP16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Atp11cQ9QZW0 1129 aa16.42■□□□□ 0.22
Shank1-201ENSMUST00000107934 Lrrc23O35125 340 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Klc2O88448 599 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 PkmP52480 531 aaKnown RBP16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Vsnl1P62761 191 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 CttnQ60598 546 aaKnown RBP16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Ticam2Q8BJQ4 232 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 SowahdQ8BY98 327 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Epc2Q8C0I4 808 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Art3Q8R2G4 371 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 PtprmP28828 1452 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Npas2P97460 816 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Entpd7Q3TCT4 606 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Ddx5Q61656 614 aaKnown RBP16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Tmem120aQ8C1E7 343 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Slc25a38Q91XD8 326 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Mccc1Q99MR8 717 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Rpf2Q9JJ80 306 aaKnown RBP16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 PfkpQ9WUA3 784 aaKnown RBP16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Gm5861F6VCN9 180 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 4933402N22RikF7D1B3 190 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Pdha1P35486 390 aaKnown RBP16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Foxp2P58463 714 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Sh3gl3Q62421 347 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Usp49Q6P9L4 685 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Znf598Q80YR4 908 aaKnown RBP16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Siglec10Q80ZE3 688 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Nudt5Q9JKX6 218 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Sec22bO08547 215 aaKnown RBP16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Kcnf1Q7TSH7 493 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Baiap2l2Q80Y61 522 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Stkld1Q80YS9 662 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Angel2Q8K1C0 544 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 MypopQ8R4U1 393 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Snx10Q9CWT3 201 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Neurl4Q5NCX5 1563 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Zfp984A2A7A2 547 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Apba1B2RUJ5 842 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Sptlc1O35704 473 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Hmgcs2P54869 508 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Serpina5P70458 405 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Zfp91Q62511 572 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Chmp2bQ8BJF9 213 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 HlcsQ920N2 722 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Klhl28Q9CR40 571 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 CpdO89001 1377 aa16.41■□□□□ 0.22
Shank1-201ENSMUST00000107934 Gm8897L7N294 181 aa16.4■□□□□ 0.22
Shank1-201ENSMUST00000107934 Atp6v1e1P50518 226 aa16.4■□□□□ 0.22
Shank1-201ENSMUST00000107934 Flot2Q60634 428 aaKnown RBP16.4■□□□□ 0.22
Shank1-201ENSMUST00000107934 Rtl3Q6P1Y1 553 aa16.4■□□□□ 0.22
Shank1-201ENSMUST00000107934 Kct2Q8K201 259 aa16.4■□□□□ 0.22
Shank1-201ENSMUST00000107934 Mtss1Q8R1S4 759 aa16.4■□□□□ 0.22
Shank1-201ENSMUST00000107934 Atpaf2Q91YY4 289 aa16.4■□□□□ 0.22
Shank1-201ENSMUST00000107934 Trmt11Q9CWH5 460 aa16.4■□□□□ 0.22
Shank1-201ENSMUST00000107934 Creld2Q9CYA0 350 aa16.4■□□□□ 0.22
Shank1-201ENSMUST00000107934 C130060K24RikG3UWA8 416 aa16.4■□□□□ 0.22
Shank1-201ENSMUST00000107934 Olfr121Q5CZY0 321 aa16.4■□□□□ 0.22
Shank1-201ENSMUST00000107934 Kcns3Q8BQZ8 491 aa16.4■□□□□ 0.22
Shank1-201ENSMUST00000107934 Pglyrp2Q8VCS0 530 aa16.4■□□□□ 0.22
Shank1-201ENSMUST00000107934 Sh2d4aQ9D7V1 421 aa16.4■□□□□ 0.22
Shank1-201ENSMUST00000107934 Pou2f3P31362 431 aa16.4■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms