RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Bhlhe23Q8BGW3 223 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tsen34Q8BMZ5 316 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Depdc1aQ8CIG0 804 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Mtmr14Q8VEL2 648 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tmem98Q91X86 226 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Usp16Q99LG0 825 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 EcdQ9CS74 641 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tor3aQ9ER38 385 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Rai2Q9QVY8 529 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Zfp111Q9R164 701 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ncam2O35136 837 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Apex1P28352 317 aaKnown RBP9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Stat4P42228 749 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Pick1Q62083 416 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Fsd1lQ8BYN5 507 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ldlrap1Q8C142 308 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Adgrf1Q8VEC3 908 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 PdgfdQ925I7 370 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Batf3Q9D275 118 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Mpp6Q9JLB0 553 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Cyp11a1Q9QZ82 526 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ccdc171E9Q1U1 1324 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Spata31E9QAF0 1014 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gm8011K7N6Y5 207 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gm8104K7N744 198 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 KeraO35367 351 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Atp8b1Q148W0 1251 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Fdxacb1Q3UY23 622 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 1700057G04RikQ3V0U0 232 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 PsdQ5DTT2 1024 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gm5431Q5NCB3 844 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Rap1gap2Q5SVL6 712 aaKnown RBP9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Sez6Q7TSK2 991 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Alkbh8Q80Y20 664 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 TufmQ8BFR5 452 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Nars2Q8BGV0 477 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Akr7a2Q8CG76 367 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Bag5Q8CI32 447 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Vps50Q8CI71 964 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 B3galt6Q91Z92 325 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Chmp1aQ921W0 196 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Slco1a6Q99J94 670 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Lpin2Q99PI5 893 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 AhspQ9CY02 102 aa9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Fip1l1Q9D824 581 aaKnown RBP9.4□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ankrd6Q69ZU8 712 aa9.4□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Fam76bQ80XP8 339 aa9.4□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cwf19l1Q8CI33 537 aa9.4□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Nckap1lQ8K1X4 1134 aa9.4□□□□□ -0.91
Clcn3-202ENSMUST00000056508 SdslQ8R238 329 aa9.4□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pcdh18Q8VHR0 1134 aa9.4□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tmed5Q9CXE7 229 aa9.4□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Q9D1F3 157 aa9.4□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Q9D9S1 216 aa9.4□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cyp4f14Q9EP75 524 aa9.4□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Sars2Q9JJL8 518 aa9.4□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Lrrc63A6H694 637 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Vwa5b1A9Z1V5 1215 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Eno2P17183 434 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm1587Q3UT80 123 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Rgl1Q60695 768 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Stx3Q64704 289 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 N4bp1Q6A037 893 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Krt42Q6IFX2 452 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Panx2Q6IMP4 677 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tnpo3Q6P2B1 923 aaKnown RBP9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Mfsd6lQ8R3N2 586 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Akr1c14Q91WT7 323 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Trem1Q9JKE2 230 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm4131A0A140LJ24 318 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Olfr552E9Q545 317 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 CenpaO35216 134 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Msh2P43247 935 aaKnown RBP9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ak8Q32M07 479 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Klhl35Q9CZ49 574 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ing1Q9QXV3 279 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ano3A2AHL1 981 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Krt28A6BLY7 462 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Arhgap36B1AUC7 590 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm12800B1AUV4 484 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 PomcP01193 235 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Hnf1bP27889 558 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Camk2bP28652 542 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 TstP52196 297 aaKnown RBP9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tmem132eQ6IEE6 982 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Etf1Q8BWY3 437 aaKnown RBP9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Efl1Q8C0D5 1127 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 RalbQ9JIW9 206 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Kcnk5Q9JK62 502 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gmeb1Q9JL60 562 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 TefQ9JLC6 301 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cul3Q9JLV5 768 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 1700016G14RikA0A286YCZ6 238 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Epb41P48193 858 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Calb2Q08331 271 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 ArhgdibQ61599 200 aaKnown RBP9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ccdc15Q8C9M2 810 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Mettl21eQ8CDZ2 244 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Wasf1Q8R5H6 559 aa9.39□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Dapk2Q8VDF3 370 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms