RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Hddc2Q3SXD3 199 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Arl13bQ640N2 427 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Q6DFW0 481 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Zbed4Q80WQ9 1168 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 C2cd2lQ80X80 706 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Dlg1Q811D0 905 aaKnown RBP10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Proser2Q8C5R2 471 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Unc45bQ8CGY6 931 aaKnown RBP10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Prl7b1Q8CGZ9 251 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gprc5cQ8K3J9 440 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 AagabQ8R2R3 316 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Cdk9Q99J95 372 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Abcg3Q99P81 650 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ggps1Q9WTN0 300 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Supt3B0QZW4 406 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Scgb2b19J3QM75 112 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gm3424L7N298 263 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gm3187M0QWW3 260 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gm8246M0QWX9 263 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Efna5O08543 228 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 AaasP58742 546 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Oog4Q4G0C7 502 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Llgl1Q80Y17 1036 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ces4aQ8R0W5 563 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Reep2Q8VCD6 254 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 BrdtQ91Y44 956 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Hspbp1Q99P31 357 aaKnown RBP10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 CtsfQ9R013 462 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Bnip3lQ9Z2F7 218 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Mpp3O88910 568 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Magea8O89012 320 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Akr1b1P45376 316 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Il1rapl1P59823 695 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Psmc1P62192 440 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Zc3h15Q3TIV5 426 aaKnown RBP10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Xlr3bQ6P205 226 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gga1Q8R0H9 635 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Nsmce1Q9D720 266 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Slc5a4aQ9ET37 656 aa10.43□□□□□ -0.74
Ldlr-201ENSMUST00000034713 PtenO08586 403 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Klrk1O54709 232 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gbp10Q000W5 611 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 SelpQ01102 768 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Phc1Q64028 1012 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Plk4Q64702 925 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gba2Q69ZF3 918 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Armcx2Q6A058 784 aaKnown RBP10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 SugctQ7TNE1 436 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Zbtb5Q7TQG0 670 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Prdm4Q80V63 803 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Rps6kc1Q8BLK9 1056 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Tmco6Q8BQX5 494 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Slc7a14Q8BXR1 771 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Tbc1d10cQ8C9V1 444 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 PpatQ8CIH9 517 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Homer3Q99JP6 356 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Bco2Q99NF1 532 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 1700129C05RikQ9CQ77 218 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Fam205aA2APU8 1308 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Foxn2E9Q7L6 429 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Stam2O88811 523 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Alox15P39654 663 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 LmnaP48678 665 aaKnown RBP10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gm1604bQ3TRG0 118 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Xlr3aQ60595 226 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Stx3Q64704 289 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Btbd7Q8CFE5 1130 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Cpa5Q8R4H4 436 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Vps39Q8R5L3 886 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Tti1Q91V83 1085 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Med24Q99K74 987 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Nt5c3aQ9D020 331 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Syf2Q9D198 242 aaKnown RBP10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Polr3cQ9D483 533 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 B020011L13RikA0A087WQI7 412 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Veph1A1A535 833 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Gbp4A4UUI3 631 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Cyp4f40G3UW81 524 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 P01734 135 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Hsd17b1P51656 344 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 BC051142Q3V0M8 400 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ppp4r3cQ3V0Y1 813 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ndufaf2Q59J78 168 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Soat1Q61263 540 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Baiap3Q80TT2 1134 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 ClmnQ8C5W0 1052 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Mrpl47Q8K2Y7 252 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ppp1r16bQ8VHQ3 568 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Tmco4Q91WU4 631 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Exoc7O35250 697 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Chil3O35744 398 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 ItkQ03526 625 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Srek1ip1Q4V9W2 153 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Orc2Q60862 576 aaKnown RBP10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Caprin1Q60865 707 aaKnown RBP10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Shc3Q61120 474 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 SnrpaQ62189 287 aaKnown RBP10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Enoph1Q8BGB7 257 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ttc16Q8C1F5 767 aa10.42□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Washc1Q8VDD8 475 aa10.42□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms