RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Tp53P02340 387 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 GcP21614 476 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 RalaP63321 206 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Ccndbp1Q3TVC7 356 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Ddx49Q4FZF3 480 aaKnown RBP8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Ccdc159Q8C963 411 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Kat5Q8CHK4 513 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Hars2Q99KK9 505 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Nr1h3Q9Z0Y9 445 aa8.96□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Lamp1P11438 406 aaKnown RBP8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 FerP70451 823 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Arl14Q3SXC5 192 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 R3hdm2Q80TM6 1044 aaKnown RBP8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Slc14a1Q8VHL0 384 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Slc5a4aQ9ET37 656 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Patl2A2ARM1 529 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Cd72P21855 354 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Ccr1P51675 355 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Spout1Q3UHX9 385 aaKnown RBP8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Zfyve28Q6ZPK7 905 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Olfr392Q7TRX6 312 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Coro7Q9D2V7 922 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Nudt12Q9DCN1 462 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Zscan4-ps1A0A1C7CYV3 506 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Nup62clA2AG10 272 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Zscan4dA7KBS4 506 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Wdr72D3YYM4 1114 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Camk4P08414 469 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Hmgcs2P54869 508 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Kcnn2P58390 839 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 YwhagP61982 247 aaKnown RBP8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 ZbbxQ0P5X5 716 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Zscan4fQ3URS2 506 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Tfdp2Q64163 446 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Zscan4cQ80VJ6 506 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Gcfc2Q8BKT3 769 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Olfr397Q8VEZ6 315 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Iqcf1Q9D9K8 182 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Serpinb6cW4VSP4 379 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Dcdc2bF7BCK0 340 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 MafbP54841 323 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 InhbaQ04998 424 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Ifnl2Q4VK74 193 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Srrm1Q52KI8 946 aaKnown RBP8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Sema5bQ60519 1093 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Samhd1Q60710 627 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Taf2Q8C176 1104 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Mamdc2Q8CG85 686 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Serpini1O35684 410 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Arl4aP61213 200 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 HelqQ2VPA6 1069 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Kcnt1Q6ZPR4 1224 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Bri3bpQ8BXV2 253 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 OafQ8QZR4 282 aa8.95□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Rbbp6P97868 1790 aaKnown RBP8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Col11a2Q64739 1736 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Rabgap1A2AWA9 1064 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Cyth3O08967 399 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Myl1P05977 188 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Aimp1P31230 310 aaKnown RBP8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Mark2Q05512 776 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Bank1Q80VH0 783 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Arhgap15Q811M1 481 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Ankrd49Q8VE42 238 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Pcdhb1Q91Y08 818 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Pdxdc1Q99K01 787 aaKnown RBP8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Slc12a9Q99MR3 914 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Cnga3Q9JJZ8 631 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Tlr2Q9QUN7 784 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Krt27Q9Z320 448 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Gm3460E9QAI8 215 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Aff1O88573 1216 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Lrriq3Q14DL3 633 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Atp2a3Q64518 1038 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Papd5Q68ED3 633 aaKnown RBP8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Fam102aQ78T81 392 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Usp27Q8CEG8 438 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Trmt10bQ9D075 318 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Ddx24Q9ESV0 857 aaKnown RBP8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Tnni1Q9WUZ5 187 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Krt16Q9Z2K1 469 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Proca1B0QZF7 307 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Ndufs6P52503 116 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Acbd5Q5XG73 508 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Zcwpw1Q6IR42 630 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Celf6Q7TN33 460 aaKnown RBP8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Fbxo43Q8CDI2 640 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 IntS13Q8QZV7 732 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Irf6P97431 467 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Ttc9Q3V038 219 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Scaf8Q6DID3 1268 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Krt42Q6IFX2 452 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Vmn2r43Q80Z08 845 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Agap1Q8BXK8 857 aaKnown RBP8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Champ1Q8K327 802 aaKnown RBP8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Alas1Q8VC19 642 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Ccdc65Q8VHI7 493 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Fubp1Q91WJ8 651 aaKnown RBP8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Rnf112Q96DY5 654 aa8.94□□□□□ -0.98
Sf3b1-201ENSMUST00000027127 Npm3Q9CPP0 175 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms