RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Eya4Q9Z191 616 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Rabgap1lA6H6A9 815 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm5483B2RV77 97 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 OatP29758 439 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Map4k1P70218 827 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Trim43bP86448 445 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Scnn1aQ61180 699 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Pcdha5Q91Y15 934 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Tlr3Q99MB1 905 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Tmed5Q9CXE7 229 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Atp5oQ9DB20 213 aaKnown RBP11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 PtsQ9R1Z7 144 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Slc4a9E9PUP3 929 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Lig1P37913 916 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Ttc39dQ0VF76 604 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Ccdc127Q3TC33 260 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Islr2Q5RKR3 745 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Adad1Q5SUE7 619 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 A1cfQ5YD48 595 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Ankrd13aQ80UP5 588 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm5622Q810Q0 167 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Rasal3Q8C2K5 1041 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Klhl11Q8CE33 709 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Igf2bp3Q9CPN8 579 aaKnown RBP11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Abcg8Q9DBM0 673 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Atp11cQ9QZW0 1129 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Magea10A2AMW4 325 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Syndig1A2ANU3 258 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Ankrd63A2ARS0 390 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Mms22lB1AUR6 1238 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 1600015I10RikE9Q745 711 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Men1O88559 611 aaKnown RBP11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Hoxc10P31257 342 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Stat3P42227 770 aaKnown RBP11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Myo19Q5SV80 963 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Klra5Q60652 266 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Sh3gl2Q62420 352 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Phc1Q64028 1012 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Mettl25Q6NXH8 597 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Olfr832Q7TRG9 312 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Srp68Q8BMA6 625 aaKnown RBP11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 BfarQ8R079 450 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Lsm7Q9CQQ8 103 aaKnown RBP11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 OoepQ9CWE6 164 aa11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 RnmtQ9D0L8 465 aaKnown RBP11.33□□□□□ -0.6
Ciita-201ENSMUST00000023147 Ddx60E9PZQ1 1711 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm8926L7MUE8 181 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Tmc5Q32NZ6 967 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Tmem120bQ3TA38 339 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Krt35Q497I4 455 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Shc3Q61120 474 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Ptk6Q64434 451 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Grm4Q68EF4 912 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Klhdc10Q6PAR0 439 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Klhl12Q8BZM0 568 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Fam20aQ8CID3 541 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Kiaa0391Q8JZY4 584 aaKnown RBP11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Eva1bQ8K2Y3 164 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 OscarQ8VBT3 265 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 WaslQ91YD9 501 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Def8Q99J78 448 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Rbp7Q9EPC5 134 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Kank3Q9Z1P7 791 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Net1Q9Z206 595 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Sucla2Q9Z2I9 463 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Serpinb3cA2RSF9 386 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 A930018M24RikB7ZMY3 218 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Tcp10cE9Q046 482 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Aco1P28271 889 aaKnown RBP11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gabpb1Q00420 383 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Rcn1Q05186 325 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Thrap3Q569Z6 951 aaKnown RBP11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Tbc1d22bQ80VE5 505 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Alkbh8Q80Y20 664 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Sf3b3Q921M3 1217 aaKnown RBP11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Unc45aQ99KD5 944 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Vmp1Q99KU0 406 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Card9A2AIV8 536 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm3252E9PUT9 216 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm2956E9PVJ0 216 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm3002E9PW72 216 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Ifi207E9Q3L4 978 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm3468E9QAJ8 216 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm8108K7N734 216 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm3739L7N296 216 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm3164L7N2B9 238 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm3488M0QW81 238 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Kcnma1Q08460 1209 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 E330034G19RikQ3UWX6 351 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Rhot1Q8BG51 631 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Nlrp4aQ8BU40 982 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Strip1Q8C079 837 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 NclnQ8VCM8 563 aaKnown RBP11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Akr1c14Q91WT7 323 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Trip4Q9QXN3 581 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Chd2E9PZM4 1827 aaKnown RBP11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Gm21488A0A087WR99 222 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Cyp4f17G3UW78 524 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Aff1O88573 1216 aa11.32□□□□□ -0.6
Ciita-201ENSMUST00000023147 Psmc3O88685 442 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms