RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 A430089I19RikQ8C9W1 407 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Slc51aQ8R000 340 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Plod1Q9R0E2 728 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Pus7B7ZNL8 666 aaKnown RBP17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 March10E9PX79 788 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 4933406M09RikG3XA12 479 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Grid2Q61625 1007 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 PrccQ9EQC8 491 aaKnown RBP17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Itgb1bp2Q9R000 350 aa17.83■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Vmn2r59E9PUT5 865 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Bub1O08901 1058 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Slc27a2O35488 620 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Vps33bP59016 617 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Ccdc117Q6PB51 277 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Nyap1Q6PFX7 833 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Atp2b4Q6Q477 1205 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Chn2Q80XD1 332 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Sema3dQ8BH34 777 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Fam136aQ9CR98 138 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Hes6Q9JHE6 224 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Kcnn2P58390 839 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Ripply1Q2WG77 201 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Gm13103Q4VAD2 491 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 SpopQ6ZWS8 374 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Dzip3Q7TPV2 1204 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Pdzph1Q8BGR1 1238 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Fgd4Q91ZT5 766 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Akap10O88845 662 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Kcna3P16390 528 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Adcy8P97490 1249 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Xxylt1Q3U4G3 392 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Ubn1Q4G0F8 1135 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 R3hdm4Q4VBF2 262 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Olfr449Q8VGW8 311 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 St13Q99L47 371 aaKnown RBP17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 HgsQ99LI8 775 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 QpctQ9CYK2 362 aa17.82■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Ifnb1P01575 182 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Calb1P12658 261 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Irf8P23611 424 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Pdlim7Q3TJD7 457 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Rnf220Q6PDX6 566 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 P2ry10Q8BFU7 328 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Plekhh3Q8VCE9 796 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Mllt10O54826 1068 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 FosP01101 380 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Cdk7Q03147 346 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Agap2Q3UHD9 1186 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Vmn1r209Q5NC97 312 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Trim47Q8C0E3 641 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Ccdc137Q8R0K4 290 aaKnown RBP17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Dnajc18Q9CZJ9 357 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Tekt1Q9DAJ2 418 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Ndufa13Q9ERS2 144 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Abcb9Q9JJ59 762 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Apol7bB1AQP7 369 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Lrrc74bQ14BP6 391 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Pid1Q3UBG2 217 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Apol7eQ3UZ24 369 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 HpseQ6YGZ1 535 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Gpr139Q80UC8 345 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Ttc39bQ8BYY4 617 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Pcolce2Q8R4W6 414 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Coa7Q921H9 231 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Cnot8Q9D8X5 292 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Tm9sf1Q9DBU0 606 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Ror2Q9Z138 944 aa17.81■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Got1P05201 413 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Drg1P32233 367 aaKnown RBP17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 ItgavP43406 1044 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Rpl5P47962 297 aaKnown RBP17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 HpdP49429 393 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Btbd6Q8K2J9 488 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Actr3Q99JY9 418 aaKnown RBP17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Rpa3Q9CQ71 121 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Arhgap42B2RQE8 841 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Gm5926E9PWJ8 236 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Upf3bQ3ULL6 472 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Lrrc43Q3V0L5 667 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Igf2bp2Q5SF07 592 aaKnown RBP17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 ClasrpQ8CFC7 668 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Ago3Q8CJF9 860 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Fam151aQ8QZW3 608 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Gmcl1Q920G9 524 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Ubiad1Q9DC60 336 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 IcmtQ9EQK7 283 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Cul3Q9JLV5 768 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Cntn6Q9JMB8 1028 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 JmyQ9QXM1 983 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Ism2D3Z6A3 493 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Gad2P48320 585 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Uchl4P58321 233 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 RfflQ6ZQM0 377 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 CyldQ80TQ2 952 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Ccdc169Q8BXX9 214 aa17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 CherpQ8CGZ0 936 aaKnown RBP17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Hspbp1Q99P31 357 aaKnown RBP17.8■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Anxa8O35640 327 aa17.79■□□□□ 0.44
Ctcf-201ENSMUST00000005841 GnptabQ69ZN6 1235 aa17.79■□□□□ 0.44
Ctcf-201ENSMUST00000005841 Gpr20Q8BYC4 358 aa17.79■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms