RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Wnt10bP48614 389 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 SpdyaQ5IBH7 310 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Uts2bQ765I1 113 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 RbakQ8BQC8 711 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Polr3fQ921X6 316 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Rsrc1Q9DBU6 334 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Lypla2Q9WTL7 231 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 PygmQ9WUB3 842 aaKnown RBP17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Arhgef10lA2AWP8 1280 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Spata31d1dE9Q5W2 1247 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Fgf15O35622 218 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ccnd2P30280 289 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Gbp1Q01514 589 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Pih1d3Q3KNI6 218 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Pbxip1Q3TVI8 727 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 SkiQ60698 725 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Q80WR5 230 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Tmem145Q8C4U2 746 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Trappc12Q8K2L8 797 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Csde1Q91W50 798 aaKnown RBP17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Usp35M0QWN7 1009 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 ThbdP15306 577 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Fgfr1P16092 822 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Slc10a3P21129 473 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Tulp2P46686 562 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Mex3cQ05A36 652 aaKnown RBP17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Mks1Q5SW45 561 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 FancbQ5XJY6 703 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Trim68Q8K243 485 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Serpina9Q9D7D2 418 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Sgk1Q9WVC6 431 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Aldh18a1Q9Z110 795 aa17.13■□□□□ 0.33
Trim28-201ENSMUST00000005705 Fam205aA2APU8 1308 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 Scn3aA2ASI5 1947 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 EloblA6PWE0 161 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ttc7bE9Q6P5 843 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 Gm6583E9Q8Z1 469 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 Zfp212G3X8R7 492 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 Gm7995L7N2E4 160 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 PrlP06879 226 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 Cyb5d1Q5NCY3 228 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 Plk4Q64702 925 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 Bco2Q99NF1 532 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 CtsfQ9R013 462 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 Atp6v1g2Q9WTT4 118 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 NynrinQ5DTZ0 1840 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 Cdh8P97291 799 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 Rnf10Q3UIW5 804 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 Zfp953Q3UPV7 304 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 Q8CD60 292 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 JmyQ9QXM1 983 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 Pdzd4Q9QY39 772 aa17.12■□□□□ 0.33
Trim28-201ENSMUST00000005705 Lrriq4A6H6A4 596 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 GnazO70443 355 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 EnahQ03173 802 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ppp2r5aQ6PD03 486 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ush1gQ80T11 461 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Vps37bQ8R0J7 285 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Klhl36Q8R124 613 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Cep72Q9D3R3 646 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ildr2B5TVM2 661 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ift81O35594 676 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Slc3a2P10852 526 aaKnown RBP17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Orai2Q8BH10 250 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Pex19Q8VCI5 299 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Acot11Q8VHQ9 594 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Pcdha10Q91Y20 946 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Snf8Q9CZ28 258 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Prdm12A2AJ77 365 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Arhgap42B2RQE8 841 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 AunipE9Q6Z5 340 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Unc5cO08747 931 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Sstr1P30873 391 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Atp11aP98197 1187 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Grb7Q03160 535 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 TchpQ3TVW5 497 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Upf3bQ3ULL6 472 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ssxb5Q6XAS2 159 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Vgll2Q8BGW8 322 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Polr3cQ9D483 533 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Mrps9Q9D7N3 390 aaKnown RBP17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ly75Q60767 1723 aa17.11■□□□□ 0.33
Trim28-201ENSMUST00000005705 PrkceP16054 737 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Zfp42P22227 288 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 9130409I23RikQ3TS87 320 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Q3UTZ3 580 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Fam92bQ3V2J0 292 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ece1Q4PZA2 769 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Zswim6Q80TB7 1207 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Cnksr2Q80YA9 1032 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Dus1lQ8C2P3 475 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Eif2b5Q8CHW4 717 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ivns1abpQ920Q8 642 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Med15Q924H2 789 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ptdss1Q99LH2 473 aaKnown RBP17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Cox16Q9CR63 106 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Olr1Q9EQ09 363 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Mical3Q8CJ19 1993 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 Ccdc6D3YZP9 469 aa17.1■□□□□ 0.33
Trim28-201ENSMUST00000005705 RarbP22605 482 aa17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms