RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C AIM9P40053 627 aaKnown RBP6.66□□□□□ -1.34
VPS71YML041C MIP1P15801 1254 aa6.65□□□□□ -1.34
VPS71YML041C NTH2P35172 780 aa6.65□□□□□ -1.34
VPS71YML041C GRS1P38088 690 aaKnown RBP6.65□□□□□ -1.34
VPS71YML041C NOP7P53261 605 aaKnown RBP6.65□□□□□ -1.34
VPS71YML041C HED1Q03937 162 aa6.65□□□□□ -1.34
VPS71YML041C WHI5Q12416 295 aa6.65□□□□□ -1.34
VPS71YML041C ATE1P16639 503 aa6.64□□□□□ -1.35
VPS71YML041C ASF1P32447 279 aa6.64□□□□□ -1.35
VPS71YML041C NGR1P32831 672 aaKnown RBP6.64□□□□□ -1.35
VPS71YML041C BOI1P38041 980 aaKnown RBP6.64□□□□□ -1.35
VPS71YML041C ALD4P46367 519 aaKnown RBP6.64□□□□□ -1.35
VPS71YML041C NUT2Q06213 157 aa6.64□□□□□ -1.35
VPS71YML041C TRS33Q99394 268 aa6.64□□□□□ -1.35
VPS71YML041C ALD2P47771 506 aa6.63□□□□□ -1.35
VPS71YML041C FRT1Q99332 602 aa6.63□□□□□ -1.35
VPS71YML041C CDC4P07834 779 aa6.62□□□□□ -1.35
VPS71YML041C QDR1P40475 563 aa6.62□□□□□ -1.35
VPS71YML041C SWI5P08153 709 aa6.61□□□□□ -1.35
VPS71YML041C RPS6AP0CX37 236 aaKnown RBP6.61□□□□□ -1.35
VPS71YML041C RPS6BP0CX38 236 aaPredicted RBP6.61□□□□□ -1.35
VPS71YML041C MRT4P33201 236 aaKnown RBP6.61□□□□□ -1.35
VPS71YML041C ISU1Q03020 165 aa6.61□□□□□ -1.35
VPS71YML041C FUR4P05316 633 aaKnown RBP6.6□□□□□ -1.35
VPS71YML041C YBR197CP38306 217 aa6.6□□□□□ -1.35
VPS71YML041C APC11Q12157 165 aa6.6□□□□□ -1.35
VPS71YML041C CYT1P07143 309 aa6.59□□□□□ -1.35
VPS71YML041C STE6P12866 1290 aa6.59□□□□□ -1.35
VPS71YML041C MET4P32389 672 aa6.59□□□□□ -1.35
VPS71YML041C FBP26P32604 452 aa6.59□□□□□ -1.35
VPS71YML041C GLO3P38682 493 aaKnown RBP6.59□□□□□ -1.35
VPS71YML041C MET32Q12041 191 aa6.59□□□□□ -1.35
VPS71YML041C MET10P39692 1035 aa6.58□□□□□ -1.36
VPS71YML041C POL32P47110 350 aa6.58□□□□□ -1.36
VPS71YML041C APP1P53933 587 aa6.58□□□□□ -1.36
VPS71YML041C SYH1Q02875 849 aaKnown RBP6.58□□□□□ -1.36
VPS71YML041C GPI13Q07830 1017 aa6.58□□□□□ -1.36
VPS71YML041C MNL2Q12205 849 aa6.58□□□□□ -1.36
VPS71YML041C KIP2P28743 706 aa6.57□□□□□ -1.36
VPS71YML041C UTR2P32623 467 aa6.57□□□□□ -1.36
VPS71YML041C YJR107WP47145 328 aa6.57□□□□□ -1.36
VPS71YML041C CAB1Q04430 367 aa6.57□□□□□ -1.36
VPS71YML041C YPQ2Q06328 317 aa6.57□□□□□ -1.36
VPS71YML041C STB3Q12427 513 aa6.57□□□□□ -1.36
VPS71YML041C KTR2P33550 425 aa6.56□□□□□ -1.36
VPS71YML041C YBL086CP38177 466 aa6.56□□□□□ -1.36
VPS71YML041C HXT5P38695 592 aa6.56□□□□□ -1.36
VPS71YML041C BRE2P43132 505 aa6.56□□□□□ -1.36
VPS71YML041C CWH41P53008 833 aa6.56□□□□□ -1.36
VPS71YML041C MKS1P34072 584 aa6.55□□□□□ -1.36
VPS71YML041C MCM1P11746 286 aa6.54□□□□□ -1.36
VPS71YML041C TRS120Q04183 1289 aa6.54□□□□□ -1.36
VPS71YML041C WTM2Q12206 467 aa6.54□□□□□ -1.36
VPS71YML041C ISC10P32645 267 aa6.53□□□□□ -1.36
VPS71YML041C SEC8P32855 1065 aa6.53□□□□□ -1.36
VPS71YML041C ASH1P34233 588 aa6.53□□□□□ -1.36
VPS71YML041C PHO4P07270 312 aaKnown RBP6.52□□□□□ -1.37
VPS71YML041C SPR3P41901 512 aa6.52□□□□□ -1.37
VPS71YML041C GCR2Q01722 534 aa6.52□□□□□ -1.37
VPS71YML041C SVF1Q05515 481 aa6.52□□□□□ -1.37
VPS71YML041C AFT1P22149 690 aa6.51□□□□□ -1.37
VPS71YML041C TBS1P38114 1094 aa6.51□□□□□ -1.37
VPS71YML041C DAT1P13483 248 aaKnown RBP6.5□□□□□ -1.37
VPS71YML041C DFG5Q05031 458 aa6.5□□□□□ -1.37
VPS71YML041C MRPL33P20084 86 aa6.49□□□□□ -1.37
VPS71YML041C RPB10P22139 70 aa6.49□□□□□ -1.37
VPS71YML041C THI12P42883 340 aa6.49□□□□□ -1.37
VPS71YML041C THI5P43534 340 aa6.49□□□□□ -1.37
VPS71YML041C THI11P47183 340 aa6.49□□□□□ -1.37
VPS71YML041C HST3P53687 447 aa6.49□□□□□ -1.37
VPS71YML041C OYE2Q03558 400 aaKnown RBP6.49□□□□□ -1.37
VPS71YML041C THI13Q07748 340 aa6.49□□□□□ -1.37
VPS71YML041C OCA5P38738 679 aa6.48□□□□□ -1.37
VPS71YML041C SUM1P46676 1062 aa6.48□□□□□ -1.37
VPS71YML041C MGE1P38523 228 aa6.47□□□□□ -1.37
VPS71YML041C UFD2P54860 961 aa6.47□□□□□ -1.37
VPS71YML041C RPP2BP02400 110 aaKnown RBP6.46□□□□□ -1.38
VPS71YML041C RTT106P40161 455 aa6.46□□□□□ -1.38
VPS71YML041C RSC4Q02206 625 aa6.46□□□□□ -1.38
VPS71YML041C BDS1Q08347 646 aa6.46□□□□□ -1.38
VPS71YML041C VMA3P25515 160 aa6.45□□□□□ -1.38
VPS71YML041C SCD5P34758 872 aa6.45□□□□□ -1.38
VPS71YML041C FYV10P40492 516 aa6.45□□□□□ -1.38
VPS71YML041C FOX2Q02207 900 aaKnown RBP6.45□□□□□ -1.38
VPS71YML041C MAG2Q06436 670 aaKnown RBP6.45□□□□□ -1.38
VPS71YML041C UTP4Q06679 776 aaKnown RBP6.45□□□□□ -1.38
VPS71YML041C DAK2P43550 591 aa6.44□□□□□ -1.38
VPS71YML041C YJR115WP47152 169 aa6.44□□□□□ -1.38
VPS71YML041C MSB3P48566 633 aaPredicted RBP6.44□□□□□ -1.38
VPS71YML041C YNL011CP53980 444 aa6.44□□□□□ -1.38
VPS71YML041C RPS31P05759 152 aaKnown RBP6.43□□□□□ -1.38
VPS71YML041C MET22P32179 357 aa6.43□□□□□ -1.38
VPS71YML041C MET1P36150 593 aa6.43□□□□□ -1.38
VPS71YML041C UTP7P40055 554 aaKnown RBP6.43□□□□□ -1.38
VPS71YML041C YNL165WP53891 406 aa6.43□□□□□ -1.38
VPS71YML041C CDC55Q00362 526 aa6.43□□□□□ -1.38
VPS71YML041C VPS35P34110 944 aa6.42□□□□□ -1.38
VPS71YML041C SSN3P39073 555 aa6.42□□□□□ -1.38
VPS71YML041C UGA3P26370 528 aa6.41□□□□□ -1.38
VPS71YML041C MCM2P29469 868 aa6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms