RNA–Protein interactions for RNA: ENST00000641964.1

CASC19-269, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,415 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-269ENST00000641964 HDGFP51858 240 aaKnown RBP9.59□□□□□ -0.87
CASC19-269ENST00000641964 RNF40O75150 1001 aa9.58□□□□□ -0.88
CASC19-269ENST00000641964 OSBPP22059 807 aa9.58□□□□□ -0.88
CASC19-269ENST00000641964 TJAP1Q5JTD0 557 aa9.58□□□□□ -0.88
CASC19-269ENST00000641964 NUDT18Q6ZVK8 323 aa9.58□□□□□ -0.88
CASC19-269ENST00000641964 CDHR5Q9HBB8 845 aa9.58□□□□□ -0.88
CASC19-269ENST00000641964 ARIH1Q9Y4X5 557 aaPredicted RBP9.58□□□□□ -0.88
CASC19-269ENST00000641964 BARGINQ6ZT62 677 aa9.57□□□□□ -0.88
CASC19-269ENST00000641964 AK7Q96M32 723 aa9.56□□□□□ -0.88
CASC19-269ENST00000641964 MTRQ99707 1265 aa9.56□□□□□ -0.88
CASC19-269ENST00000641964 HRCP23327 699 aa9.55□□□□□ -0.88
CASC19-269ENST00000641964 IL21Q9HBE4 155 aa9.55□□□□□ -0.88
CASC19-269ENST00000641964 GFRA3O60609 400 aa9.54□□□□□ -0.88
CASC19-269ENST00000641964 IL27Q8NEV9 243 aa9.53□□□□□ -0.88
CASC19-269ENST00000641964 ZNF516Q92618 1163 aa9.53□□□□□ -0.88
CASC19-269ENST00000641964 PRKD2Q9BZL6 878 aa9.53□□□□□ -0.88
CASC19-269ENST00000641964 PPP1R18Q6NYC8 613 aa9.52□□□□□ -0.89
CASC19-269ENST00000641964 APLP1P51693 650 aa9.51□□□□□ -0.89
CASC19-269ENST00000641964 LAPTM4AQ15012 233 aa9.51□□□□□ -0.89
CASC19-269ENST00000641964 ARID3AQ99856 593 aa9.51□□□□□ -0.89
CASC19-269ENST00000641964 PADI6Q6TGC4 694 aa9.5□□□□□ -0.89
CASC19-269ENST00000641964 GPBP1L1Q9HC44 474 aaPredicted RBP9.5□□□□□ -0.89
CASC19-269ENST00000641964 RBM27Q9P2N5 1060 aaKnown RBP9.5□□□□□ -0.89
CASC19-269ENST00000641964 NPDC1Q9NQX5 325 aaPredicted RBP9.49□□□□□ -0.89
CASC19-269ENST00000641964 SWT1Q5T5J6 900 aaKnown RBP9.48□□□□□ -0.89
CASC19-269ENST00000641964 KRI1Q8N9T8 703 aaKnown RBP9.48□□□□□ -0.89
CASC19-269ENST00000641964 NKX2-3Q8TAU0 364 aa9.48□□□□□ -0.89
CASC19-269ENST00000641964 KDM4CQ9H3R0 1056 aa9.48□□□□□ -0.89
CASC19-269ENST00000641964 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.48□□□□□ -0.89
CASC19-269ENST00000641964 COPS2P61201 443 aa9.47□□□□□ -0.89
CASC19-269ENST00000641964 TRAF7Q6Q0C0 670 aa9.46□□□□□ -0.9
CASC19-269ENST00000641964 SLF2Q8IX21 1173 aa9.46□□□□□ -0.9
CASC19-269ENST00000641964 TTC13Q8NBP0 860 aa9.46□□□□□ -0.9
CASC19-269ENST00000641964 NECTIN2Q92692 538 aa9.45□□□□□ -0.9
CASC19-269ENST00000641964 SLC4A3P48751 1232 aa9.44□□□□□ -0.9
CASC19-269ENST00000641964 V9GY48 417 aaPredicted RBP9.43□□□□□ -0.9
CASC19-269ENST00000641964 ZBTB7CA1YPR0 619 aa9.42□□□□□ -0.9
CASC19-269ENST00000641964 LCE2BO14633 110 aa9.42□□□□□ -0.9
CASC19-269ENST00000641964 GPIHBP1Q8IV16 184 aa9.42□□□□□ -0.9
CASC19-269ENST00000641964 EYA1Q99502 592 aa9.42□□□□□ -0.9
CASC19-269ENST00000641964 C1orf115Q9H7X2 142 aa9.42□□□□□ -0.9
CASC19-269ENST00000641964 PDIA4P13667 645 aaKnown RBP9.41□□□□□ -0.9
CASC19-269ENST00000641964 GGCXP38435 758 aa9.41□□□□□ -0.9
CASC19-269ENST00000641964 MLLT3P42568 568 aaPredicted RBP9.41□□□□□ -0.9
CASC19-269ENST00000641964 NRG2O14511 850 aaPredicted RBP9.4□□□□□ -0.9
CASC19-269ENST00000641964 CCDC9Q9Y3X0 531 aaKnown RBP9.4□□□□□ -0.9
CASC19-269ENST00000641964 PDE4DQ08499 809 aa9.39□□□□□ -0.91
CASC19-269ENST00000641964 APBB1O00213 710 aa9.39□□□□□ -0.91
CASC19-269ENST00000641964 TRIM66O15016 1216 aa9.39□□□□□ -0.91
CASC19-269ENST00000641964 ZPR1O75312 459 aa9.39□□□□□ -0.91
CASC19-269ENST00000641964 PDZRN3Q9UPQ7 1066 aa9.39□□□□□ -0.91
CASC19-269ENST00000641964 PCDHB3Q9Y5E6 796 aa9.38□□□□□ -0.91
CASC19-269ENST00000641964 FLIIQ13045 1269 aa9.37□□□□□ -0.91
CASC19-269ENST00000641964 RBM26Q5T8P6 1007 aaKnown RBP9.37□□□□□ -0.91
CASC19-269ENST00000641964 TMUB1Q9BVT8 246 aa9.36□□□□□ -0.91
CASC19-269ENST00000641964 PRR14Q9BWN1 585 aa9.36□□□□□ -0.91
CASC19-269ENST00000641964 ARID3CA6NKF2 412 aa9.35□□□□□ -0.91
CASC19-269ENST00000641964 PTGDRQ13258 359 aa9.35□□□□□ -0.91
CASC19-269ENST00000641964 NUTM2FA1L443 756 aa9.34□□□□□ -0.91
CASC19-269ENST00000641964 BLOC1S3Q6QNY0 202 aa9.34□□□□□ -0.91
CASC19-269ENST00000641964 RBM46Q8TBY0 533 aaKnown RBP9.34□□□□□ -0.91
CASC19-269ENST00000641964 DNAJB2P25686 324 aa9.33□□□□□ -0.92
CASC19-269ENST00000641964 FAM161AQ3B820 660 aa9.33□□□□□ -0.92
CASC19-269ENST00000641964 RNF223E7ERA6 249 aa9.31□□□□□ -0.92
CASC19-269ENST00000641964 SLC19A1P41440 591 aa9.31□□□□□ -0.92
CASC19-269ENST00000641964 DDRGK1Q96HY6 314 aa9.31□□□□□ -0.92
CASC19-269ENST00000641964 FAM117AQ9C073 453 aa9.31□□□□□ -0.92
CASC19-269ENST00000641964 TMEM134Q9H6X4 195 aa9.31□□□□□ -0.92
CASC19-269ENST00000641964 ADGRG1Q9Y653 693 aa9.31□□□□□ -0.92
CASC19-269ENST00000641964 RCCD1A6NED2 376 aa9.3□□□□□ -0.92
CASC19-269ENST00000641964 ZNF787Q6DD87 383 aa9.3□□□□□ -0.92
CASC19-269ENST00000641964 TLL1O43897 1013 aa9.29□□□□□ -0.92
CASC19-269ENST00000641964 PPEF1O14829 653 aaPredicted RBP9.28□□□□□ -0.92
CASC19-269ENST00000641964 KMT5BQ4FZB7 885 aa9.28□□□□□ -0.92
CASC19-269ENST00000641964 ACTN4O43707 911 aaKnown RBP9.27□□□□□ -0.93
CASC19-269ENST00000641964 CFHP08603 1231 aa9.27□□□□□ -0.93
CASC19-269ENST00000641964 S1PR4O95977 384 aa9.25□□□□□ -0.93
CASC19-269ENST00000641964 EMID1Q96A84 441 aaPredicted RBP9.25□□□□□ -0.93
CASC19-269ENST00000641964 A6NJR5 290 aa9.24□□□□□ -0.93
CASC19-269ENST00000641964 FCHSD2O94868 740 aa9.24□□□□□ -0.93
CASC19-269ENST00000641964 SLC10A3P09131 477 aa9.24□□□□□ -0.93
CASC19-269ENST00000641964 TRIM67Q6ZTA4 783 aa9.24□□□□□ -0.93
CASC19-269ENST00000641964 PLEKHG3A1L390 1219 aa9.23□□□□□ -0.93
CASC19-269ENST00000641964 SPRYD7Q5W111 196 aa9.23□□□□□ -0.93
CASC19-269ENST00000641964 CCDC82Q8N4S0 544 aa9.23□□□□□ -0.93
CASC19-269ENST00000641964 ANKLE1Q8NAG6 615 aa9.22□□□□□ -0.93
CASC19-269ENST00000641964 ZCCHC6Q5VYS8 1495 aaKnown RBP9.22□□□□□ -0.93
CASC19-269ENST00000641964 TRAK2O60296 914 aa9.22□□□□□ -0.93
CASC19-269ENST00000641964 NR1I2O75469 434 aa9.22□□□□□ -0.93
CASC19-269ENST00000641964 PKDCCQ504Y2 493 aa9.22□□□□□ -0.93
CASC19-269ENST00000641964 LIAT1Q6ZQX7 453 aa9.22□□□□□ -0.93
CASC19-269ENST00000641964 ZNF598Q86UK7 904 aaKnown RBP9.22□□□□□ -0.93
CASC19-269ENST00000641964 MINK1Q8N4C8 1332 aaPredicted RBP9.21□□□□□ -0.93
CASC19-269ENST00000641964 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.21□□□□□ -0.94
CASC19-269ENST00000641964 GOPCQ9HD26 462 aa9.21□□□□□ -0.94
CASC19-269ENST00000641964 OATP04181 439 aa9.2□□□□□ -0.94
CASC19-269ENST00000641964 ADH1BP00325 375 aa9.19□□□□□ -0.94
CASC19-269ENST00000641964 RSPH4AQ5TD94 716 aa9.19□□□□□ -0.94
CASC19-269ENST00000641964 ZNF697Q5TEC3 545 aa9.19□□□□□ -0.94
CASC19-269ENST00000641964 SCUBE3Q8IX30 993 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms