RNA–Protein interactions for RNA: ENST00000641536.1

CCDC196-209, Transcript of coiled-coil domain containing 196, humanhuman

Gene CCDC196, Length 1,483 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-209ENST00000641536 CPS1P31327 1500 aa10.89□□□□□ -0.67
CCDC196-209ENST00000641536 MKRN4PQ13434 485 aaPredicted RBP10.88□□□□□ -0.67
CCDC196-209ENST00000641536 ANKLE2Q86XL3 938 aa10.88□□□□□ -0.67
CCDC196-209ENST00000641536 ERBINQ96RT1 1412 aa10.88□□□□□ -0.67
CCDC196-209ENST00000641536 MED14O60244 1454 aa10.88□□□□□ -0.67
CCDC196-209ENST00000641536 THEMISQ8N1K5 641 aaPredicted RBP10.87□□□□□ -0.67
CCDC196-209ENST00000641536 GCC2Q8IWJ2 1684 aa10.86□□□□□ -0.67
CCDC196-209ENST00000641536 HSPA1LP34931 641 aa10.86□□□□□ -0.67
CCDC196-209ENST00000641536 LRRC7Q96NW7 1537 aa10.86□□□□□ -0.67
CCDC196-209ENST00000641536 MED1Q15648 1581 aaPredicted RBP10.85□□□□□ -0.67
CCDC196-209ENST00000641536 SCAF11Q99590 1463 aaKnown RBP10.85□□□□□ -0.67
CCDC196-209ENST00000641536 LTKP29376 864 aa10.85□□□□□ -0.67
CCDC196-209ENST00000641536 FAM50AQ14320 339 aaKnown RBP10.85□□□□□ -0.67
CCDC196-209ENST00000641536 EFCAB6Q5THR3 1501 aa10.85□□□□□ -0.67
CCDC196-209ENST00000641536 SLIT1O75093 1534 aa10.84□□□□□ -0.67
CCDC196-209ENST00000641536 PPARGC1BQ86YN6 1023 aaKnown RBP10.84□□□□□ -0.67
CCDC196-209ENST00000641536 ARHGAP23Q9P227 1491 aa10.83□□□□□ -0.68
CCDC196-209ENST00000641536 ANKRD30AQ9BXX3 1397 aa10.82□□□□□ -0.68
CCDC196-209ENST00000641536 ARHGAP31Q2M1Z3 1444 aa10.82□□□□□ -0.68
CCDC196-209ENST00000641536 ADGRL2O95490 1459 aa10.82□□□□□ -0.68
CCDC196-209ENST00000641536 LMTK2Q8IWU2 1503 aa10.82□□□□□ -0.68
CCDC196-209ENST00000641536 E9PCH4 1651 aa10.82□□□□□ -0.68
CCDC196-209ENST00000641536 ADGRB3O60242 1522 aa10.81□□□□□ -0.68
CCDC196-209ENST00000641536 TET3O43151 1660 aa10.81□□□□□ -0.68
CCDC196-209ENST00000641536 TXNDC2Q86VQ3 553 aa10.81□□□□□ -0.68
CCDC196-209ENST00000641536 RBM33Q96EV2 1170 aaKnown RBP10.81□□□□□ -0.68
CCDC196-209ENST00000641536 KANK1Q14678 1352 aa10.8□□□□□ -0.68
CCDC196-209ENST00000641536 KDM5AP29375 1690 aaKnown RBP10.8□□□□□ -0.68
CCDC196-209ENST00000641536 UNC13BO14795 1591 aa10.8□□□□□ -0.68
CCDC196-209ENST00000641536 TOM1O60784 492 aa10.79□□□□□ -0.68
CCDC196-209ENST00000641536 IDI1Q13907 227 aa10.79□□□□□ -0.68
CCDC196-209ENST00000641536 NOS1P29475 1434 aa10.78□□□□□ -0.68
CCDC196-209ENST00000641536 ANKRD50Q9ULJ7 1429 aa10.78□□□□□ -0.68
CCDC196-209ENST00000641536 TMEM2Q9UHN6 1383 aa10.78□□□□□ -0.68
CCDC196-209ENST00000641536 SOCS7O14512 581 aa10.78□□□□□ -0.68
CCDC196-209ENST00000641536 STAG3Q9UJ98 1225 aa10.78□□□□□ -0.68
CCDC196-209ENST00000641536 ITGAEP38570 1179 aa10.77□□□□□ -0.69
CCDC196-209ENST00000641536 SLC26A8Q96RN1 970 aa10.77□□□□□ -0.69
CCDC196-209ENST00000641536 TMEM131LA2VDJ0 1609 aa10.77□□□□□ -0.69
CCDC196-209ENST00000641536 CHD2O14647 1828 aaKnown RBP10.77□□□□□ -0.69
CCDC196-209ENST00000641536 SPDYE4A6NLX3 237 aa10.76□□□□□ -0.69
CCDC196-209ENST00000641536 ROBO1Q9Y6N7 1651 aa10.76□□□□□ -0.69
CCDC196-209ENST00000641536 IQGAP3Q86VI3 1631 aa10.76□□□□□ -0.69
CCDC196-209ENST00000641536 NUTM2DQ5VT03 806 aaPredicted RBP10.74□□□□□ -0.69
CCDC196-209ENST00000641536 EID1Q9Y6B2 187 aa10.74□□□□□ -0.69
CCDC196-209ENST00000641536 NWD1Q149M9 1564 aa10.74□□□□□ -0.69
CCDC196-209ENST00000641536 SPHKAPQ2M3C7 1700 aa10.73□□□□□ -0.69
CCDC196-209ENST00000641536 TMEM94Q12767 1356 aa10.72□□□□□ -0.69
CCDC196-209ENST00000641536 ZFYVE9O95405 1425 aa10.72□□□□□ -0.69
CCDC196-209ENST00000641536 BCANQ96GW7 911 aa10.72□□□□□ -0.69
CCDC196-209ENST00000641536 RIMS2Q9UQ26 1411 aa10.71□□□□□ -0.69
CCDC196-209ENST00000641536 CHGAP10645 457 aaKnown RBP10.71□□□□□ -0.69
CCDC196-209ENST00000641536 RPRD2Q5VT52 1461 aaKnown RBP10.71□□□□□ -0.7
CCDC196-209ENST00000641536 PHLPP1O60346 1717 aa10.7□□□□□ -0.7
CCDC196-209ENST00000641536 HAX1O00165 279 aa10.7□□□□□ -0.7
CCDC196-209ENST00000641536 SETD1AO15047 1707 aaKnown RBP10.69□□□□□ -0.7
CCDC196-209ENST00000641536 NRXN3Q9Y4C0 1643 aa10.69□□□□□ -0.7
CCDC196-209ENST00000641536 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.68□□□□□ -0.7
CCDC196-209ENST00000641536 KCNA6P17658 529 aa10.68□□□□□ -0.7
CCDC196-209ENST00000641536 PROSER2Q86WR7 435 aaPredicted RBP10.68□□□□□ -0.7
CCDC196-209ENST00000641536 NKTRP30414 1462 aaKnown RBP10.67□□□□□ -0.7
CCDC196-209ENST00000641536 CLTCL1P53675 1640 aa10.67□□□□□ -0.7
CCDC196-209ENST00000641536 PPP1R15AO75807 674 aaPredicted RBP10.67□□□□□ -0.7
CCDC196-209ENST00000641536 NUP155O75694 1391 aa10.66□□□□□ -0.7
CCDC196-209ENST00000641536 ROCK1Q13464 1354 aa10.66□□□□□ -0.7
CCDC196-209ENST00000641536 PLEKHG1Q9ULL1 1385 aa10.66□□□□□ -0.7
CCDC196-209ENST00000641536 LHX8Q68G74 356 aa10.66□□□□□ -0.7
CCDC196-209ENST00000641536 SLC52A1Q9NWF4 448 aa10.66□□□□□ -0.7
CCDC196-209ENST00000641536 ADAMTS13Q76LX8 1427 aa10.66□□□□□ -0.7
CCDC196-209ENST00000641536 KIF1BO60333 1816 aa10.65□□□□□ -0.7
CCDC196-209ENST00000641536 COL16A1Q07092 1604 aaPredicted RBP10.64□□□□□ -0.71
CCDC196-209ENST00000641536 SPDYE2BA6NHP3 402 aa10.64□□□□□ -0.71
CCDC196-209ENST00000641536 SPDYE6P0CI01 402 aa10.64□□□□□ -0.71
CCDC196-209ENST00000641536 SPDYE2Q495Y8 402 aa10.64□□□□□ -0.71
CCDC196-209ENST00000641536 RGS17Q9UGC6 210 aaPredicted RBP10.64□□□□□ -0.71
CCDC196-209ENST00000641536 PTPRUQ92729 1446 aa10.63□□□□□ -0.71
CCDC196-209ENST00000641536 XRN1Q8IZH2 1706 aaKnown RBP10.63□□□□□ -0.71
CCDC196-209ENST00000641536 FAM135BQ49AJ0 1406 aa10.63□□□□□ -0.71
CCDC196-209ENST00000641536 DIP2AQ14689 1571 aa10.62□□□□□ -0.71
CCDC196-209ENST00000641536 MSH6P52701 1360 aa10.62□□□□□ -0.71
CCDC196-209ENST00000641536 NALCNQ8IZF0 1738 aa10.62□□□□□ -0.71
CCDC196-209ENST00000641536 ZNF692Q9BU19 519 aaPredicted RBP10.61□□□□□ -0.71
CCDC196-209ENST00000641536 TRPM2O94759 1503 aa10.61□□□□□ -0.71
CCDC196-209ENST00000641536 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
CCDC196-209ENST00000641536 NEXMIFQ5QGS0 1516 aa10.6□□□□□ -0.71
CCDC196-209ENST00000641536 C14orf37Q86TY3 774 aa10.6□□□□□ -0.71
CCDC196-209ENST00000641536 PROM2Q8N271 834 aa10.59□□□□□ -0.71
CCDC196-209ENST00000641536 NAIPQ13075 1403 aa10.59□□□□□ -0.71
CCDC196-209ENST00000641536 RRBP1Q9P2E9 1410 aaKnown RBP10.59□□□□□ -0.71
CCDC196-209ENST00000641536 SETBP1Q9Y6X0 1596 aa10.59□□□□□ -0.71
CCDC196-209ENST00000641536 LRP6O75581 1613 aa10.59□□□□□ -0.71
CCDC196-209ENST00000641536 ZNF326Q5BKZ1 582 aaKnown RBP10.58□□□□□ -0.72
CCDC196-209ENST00000641536 POTEAQ6S8J7 498 aa10.58□□□□□ -0.72
CCDC196-209ENST00000641536 PIP4P2Q8N4L2 257 aa10.58□□□□□ -0.72
CCDC196-209ENST00000641536 SLAIN2Q9P270 581 aa10.58□□□□□ -0.72
CCDC196-209ENST00000641536 PPLO60437 1756 aa10.57□□□□□ -0.72
CCDC196-209ENST00000641536 SHPRHQ149N8 1683 aa10.57□□□□□ -0.72
CCDC196-209ENST00000641536 TBX22Q9Y458 520 aa10.57□□□□□ -0.72
CCDC196-209ENST00000641536 METP08581 1390 aa10.56□□□□□ -0.72
CCDC196-209ENST00000641536 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms