RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 MIER1Q8N108 512 aa12.38□□□□□ -0.43
PHGDH-219ENST00000641513 ERVK-7P63135 1459 aa12.36□□□□□ -0.43
PHGDH-219ENST00000641513 NBPF1Q3BBV0 1214 aa12.35□□□□□ -0.43
PHGDH-219ENST00000641513 STAC3Q96MF2 364 aa12.35□□□□□ -0.43
PHGDH-219ENST00000641513 POLR3GLQ9BT43 218 aa12.35□□□□□ -0.43
PHGDH-219ENST00000641513 IQGAP1P46940 1657 aa12.35□□□□□ -0.43
PHGDH-219ENST00000641513 MYOM2P54296 1465 aa12.34□□□□□ -0.43
PHGDH-219ENST00000641513 TMEM131LA2VDJ0 1609 aa12.34□□□□□ -0.43
PHGDH-219ENST00000641513 FBXO31Q5XUX0 539 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-219ENST00000641513 SLC52A1Q9NWF4 448 aa12.34□□□□□ -0.43
PHGDH-219ENST00000641513 STAG3Q9UJ98 1225 aa12.33□□□□□ -0.44
PHGDH-219ENST00000641513 SPATA31D1Q6ZQQ2 1576 aa12.33□□□□□ -0.44
PHGDH-219ENST00000641513 IDI1Q13907 227 aa12.32□□□□□ -0.44
PHGDH-219ENST00000641513 WASHC2AQ641Q2 1341 aa12.32□□□□□ -0.44
PHGDH-219ENST00000641513 C3P01024 1663 aa12.32□□□□□ -0.44
PHGDH-219ENST00000641513 CCDC7Q96M83 1385 aa12.31□□□□□ -0.44
PHGDH-219ENST00000641513 RPGRIP1LQ68CZ1 1315 aa12.31□□□□□ -0.44
PHGDH-219ENST00000641513 ADGRF5Q8IZF2 1346 aa12.31□□□□□ -0.44
PHGDH-219ENST00000641513 NEXMIFQ5QGS0 1516 aa12.31□□□□□ -0.44
PHGDH-219ENST00000641513 ZMYM3Q14202 1370 aa12.3□□□□□ -0.44
PHGDH-219ENST00000641513 GPRASP1Q5JY77 1395 aa12.3□□□□□ -0.44
PHGDH-219ENST00000641513 ST20-MTHFSA0A0A6YYL1 179 aa12.3□□□□□ -0.44
PHGDH-219ENST00000641513 C11orf95C9JLR9 678 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-219ENST00000641513 PLPPR3Q6T4P5 718 aa12.3□□□□□ -0.44
PHGDH-219ENST00000641513 NUTM2DQ5VT03 806 aaPredicted RBP12.29□□□□□ -0.44
PHGDH-219ENST00000641513 PIAS4Q8N2W9 510 aaPredicted RBP12.29□□□□□ -0.44
PHGDH-219ENST00000641513 KIF7Q2M1P5 1343 aa12.29□□□□□ -0.44
PHGDH-219ENST00000641513 RIMS1Q86UR5 1692 aaKnown RBP12.29□□□□□ -0.44
PHGDH-219ENST00000641513 CFAP70Q5T0N1 1121 aa12.28□□□□□ -0.44
PHGDH-219ENST00000641513 VGFO15240 615 aaPredicted RBP12.27□□□□□ -0.45
PHGDH-219ENST00000641513 ANP32CO43423 234 aa12.27□□□□□ -0.45
PHGDH-219ENST00000641513 NRXN1Q9ULB1 1477 aa12.27□□□□□ -0.45
PHGDH-219ENST00000641513 GTF3C3Q9Y5Q9 886 aa12.26□□□□□ -0.45
PHGDH-219ENST00000641513 TNRQ92752 1358 aa12.26□□□□□ -0.45
PHGDH-219ENST00000641513 SCAF11Q99590 1463 aaKnown RBP12.26□□□□□ -0.45
PHGDH-219ENST00000641513 SETBP1Q9Y6X0 1596 aa12.26□□□□□ -0.45
PHGDH-219ENST00000641513 UBR1Q8IWV7 1749 aa12.25□□□□□ -0.45
PHGDH-219ENST00000641513 EIF3AQ14152 1382 aaKnown RBP12.25□□□□□ -0.45
PHGDH-219ENST00000641513 PIK3C2GO75747 1445 aa12.25□□□□□ -0.45
PHGDH-219ENST00000641513 KDM5AP29375 1690 aaKnown RBP12.24□□□□□ -0.45
PHGDH-219ENST00000641513 QRICH2Q9H0J4 1663 aa12.24□□□□□ -0.45
PHGDH-219ENST00000641513 A2ML1A8K2U0 1454 aa12.23□□□□□ -0.45
PHGDH-219ENST00000641513 CEBPAP49715 358 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-219ENST00000641513 TMF1P82094 1093 aa12.22□□□□□ -0.45
PHGDH-219ENST00000641513 YTHDC1Q96MU7 727 aaKnown RBP12.22□□□□□ -0.45
PHGDH-219ENST00000641513 C14orf93Q9H972 538 aaKnown RBP12.22□□□□□ -0.45
PHGDH-219ENST00000641513 ARHGEF28Q8N1W1 1705 aaKnown RBP12.22□□□□□ -0.45
PHGDH-219ENST00000641513 RIMS2Q9UQ26 1411 aa12.21□□□□□ -0.45
PHGDH-219ENST00000641513 MYO3AQ8NEV4 1616 aa12.21□□□□□ -0.46
PHGDH-219ENST00000641513 ZFYVE9O95405 1425 aa12.2□□□□□ -0.46
PHGDH-219ENST00000641513 TMEM132EQ6IEE7 984 aa12.2□□□□□ -0.46
PHGDH-219ENST00000641513 ADAMTSL3P82987 1691 aa12.19□□□□□ -0.46
PHGDH-219ENST00000641513 TRAK1Q9UPV9 953 aa12.19□□□□□ -0.46
PHGDH-219ENST00000641513 ALKQ9UM73 1620 aa12.19□□□□□ -0.46
PHGDH-219ENST00000641513 DISP3Q9P2K9 1392 aa12.18□□□□□ -0.46
PHGDH-219ENST00000641513 ADGRB1O14514 1584 aa12.18□□□□□ -0.46
PHGDH-219ENST00000641513 CCER2I3L3R5 266 aa12.18□□□□□ -0.46
PHGDH-219ENST00000641513 CNGB1Q14028 1251 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-219ENST00000641513 TESK2Q96S53 571 aa12.18□□□□□ -0.46
PHGDH-219ENST00000641513 NLRP1Q9C000 1473 aa12.18□□□□□ -0.46
PHGDH-219ENST00000641513 HDGFP51858 240 aaKnown RBP12.17□□□□□ -0.46
PHGDH-219ENST00000641513 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.17□□□□□ -0.46
PHGDH-219ENST00000641513 BCANQ96GW7 911 aa12.17□□□□□ -0.46
PHGDH-219ENST00000641513 SETD1AO15047 1707 aaKnown RBP12.17□□□□□ -0.46
PHGDH-219ENST00000641513 CDCA8Q53HL2 280 aa12.16□□□□□ -0.46
PHGDH-219ENST00000641513 STK26Q9P289 416 aa12.16□□□□□ -0.46
PHGDH-219ENST00000641513 CENPJQ9HC77 1338 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-219ENST00000641513 ASXL1Q8IXJ9 1541 aa12.15□□□□□ -0.46
PHGDH-219ENST00000641513 SETD1BQ9UPS6 1966 aaKnown RBP12.14□□□□□ -0.47
PHGDH-219ENST00000641513 MYOM1P52179 1685 aa12.14□□□□□ -0.47
PHGDH-219ENST00000641513 NRXN3Q9Y4C0 1643 aa12.14□□□□□ -0.47
PHGDH-219ENST00000641513 SLC24A1O60721 1099 aa12.13□□□□□ -0.47
PHGDH-219ENST00000641513 TMEM2Q9UHN6 1383 aa12.12□□□□□ -0.47
PHGDH-219ENST00000641513 YTHDC2Q9H6S0 1430 aaKnown RBP12.11□□□□□ -0.47
PHGDH-219ENST00000641513 CEP170BQ9Y4F5 1589 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-219ENST00000641513 SAFB2Q14151 953 aaKnown RBP eCLIP12.11□□□□□ -0.47
PHGDH-219ENST00000641513 ZNF142P52746 1687 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-219ENST00000641513 PRKRIP1Q9H875 184 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-219ENST00000641513 POGKQ9P215 609 aa12.1□□□□□ -0.47
PHGDH-219ENST00000641513 EID1Q9Y6B2 187 aa12.1□□□□□ -0.47
PHGDH-219ENST00000641513 KNDC1Q76NI1 1749 aa12.1□□□□□ -0.47
PHGDH-219ENST00000641513 TXNDC2Q86VQ3 553 aa12.09□□□□□ -0.47
PHGDH-219ENST00000641513 THEMISQ8N1K5 641 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-219ENST00000641513 PANK3Q9H999 370 aa12.09□□□□□ -0.47
PHGDH-219ENST00000641513 PTPRMP28827 1452 aa12.08□□□□□ -0.47
PHGDH-219ENST00000641513 SBNO2Q9Y2G9 1366 aa12.08□□□□□ -0.48
PHGDH-219ENST00000641513 SLIT1O75093 1534 aa12.07□□□□□ -0.48
PHGDH-219ENST00000641513 PRAM1Q96QH2 718 aa12.07□□□□□ -0.48
PHGDH-219ENST00000641513 EVC2Q86UK5 1308 aa12.07□□□□□ -0.48
PHGDH-219ENST00000641513 ARHGAP23Q9P227 1491 aa12.06□□□□□ -0.48
PHGDH-219ENST00000641513 MINK1Q8N4C8 1332 aaPredicted RBP12.06□□□□□ -0.48
PHGDH-219ENST00000641513 DLC1Q96QB1 1528 aa12.06□□□□□ -0.48
PHGDH-219ENST00000641513 LRPPRCP42704 1394 aaKnown RBP12.05□□□□□ -0.48
PHGDH-219ENST00000641513 KTN1Q86UP2 1357 aaKnown RBP12.05□□□□□ -0.48
PHGDH-219ENST00000641513 PLEKHG1Q9ULL1 1385 aa12.05□□□□□ -0.48
PHGDH-219ENST00000641513 LTKP29376 864 aa12.05□□□□□ -0.48
PHGDH-219ENST00000641513 TMC1Q8TDI8 760 aa12.05□□□□□ -0.48
PHGDH-219ENST00000641513 TULP4Q9NRJ4 1543 aa12.05□□□□□ -0.48
PHGDH-219ENST00000641513 METP08581 1390 aa12.05□□□□□ -0.48
PHGDH-219ENST00000641513 CC2D1BQ5T0F9 858 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms