RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 MIER1Q8N108 512 aa13.52□□□□□ -0.25
PHGDH-215ENST00000641371 WASHC2AQ641Q2 1341 aa13.52□□□□□ -0.25
PHGDH-215ENST00000641371 UGGT1Q9NYU2 1555 aa13.52□□□□□ -0.25
PHGDH-215ENST00000641371 IQGAP1P46940 1657 aa13.52□□□□□ -0.25
PHGDH-215ENST00000641371 SCAF11Q99590 1463 aaKnown RBP13.51□□□□□ -0.25
PHGDH-215ENST00000641371 KDM5AP29375 1690 aaKnown RBP13.5□□□□□ -0.25
PHGDH-215ENST00000641371 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
PHGDH-215ENST00000641371 HIRIP3Q9BW71 556 aaPredicted RBP13.49□□□□□ -0.25
PHGDH-215ENST00000641371 CCER2I3L3R5 266 aa13.48□□□□□ -0.25
PHGDH-215ENST00000641371 CDCA8Q53HL2 280 aa13.48□□□□□ -0.25
PHGDH-215ENST00000641371 TMEM131LA2VDJ0 1609 aa13.48□□□□□ -0.25
PHGDH-215ENST00000641371 NEXMIFQ5QGS0 1516 aa13.48□□□□□ -0.25
PHGDH-215ENST00000641371 PIK3C2GO75747 1445 aa13.47□□□□□ -0.25
PHGDH-215ENST00000641371 KIF7Q2M1P5 1343 aa13.47□□□□□ -0.25
PHGDH-215ENST00000641371 CHGAP10645 457 aaKnown RBP13.47□□□□□ -0.25
PHGDH-215ENST00000641371 ST20-MTHFSA0A0A6YYL1 179 aa13.46□□□□□ -0.25
PHGDH-215ENST00000641371 CENPBP07199 599 aaPredicted RBP13.46□□□□□ -0.25
PHGDH-215ENST00000641371 ZMYM3Q14202 1370 aa13.45□□□□□ -0.26
PHGDH-215ENST00000641371 TMF1P82094 1093 aa13.45□□□□□ -0.26
PHGDH-215ENST00000641371 IDI1Q13907 227 aa13.45□□□□□ -0.26
PHGDH-215ENST00000641371 MYO3AQ8NEV4 1616 aa13.44□□□□□ -0.26
PHGDH-215ENST00000641371 HDGFP51858 240 aaKnown RBP13.44□□□□□ -0.26
PHGDH-215ENST00000641371 NBPF1Q3BBV0 1214 aa13.44□□□□□ -0.26
PHGDH-215ENST00000641371 SBNO2Q9Y2G9 1366 aa13.44□□□□□ -0.26
PHGDH-215ENST00000641371 C14orf93Q9H972 538 aaKnown RBP13.43□□□□□ -0.26
PHGDH-215ENST00000641371 KTN1Q86UP2 1357 aaKnown RBP13.43□□□□□ -0.26
PHGDH-215ENST00000641371 NLRP1Q9C000 1473 aa13.42□□□□□ -0.26
PHGDH-215ENST00000641371 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.42□□□□□ -0.26
PHGDH-215ENST00000641371 STAG3Q9UJ98 1225 aa13.42□□□□□ -0.26
PHGDH-215ENST00000641371 ADGRF5Q8IZF2 1346 aa13.41□□□□□ -0.26
PHGDH-215ENST00000641371 MYO5BQ9ULV0 1848 aa13.41□□□□□ -0.26
PHGDH-215ENST00000641371 FER1L4A9Z1Z3 1794 aa13.41□□□□□ -0.26
PHGDH-215ENST00000641371 C11orf95C9JLR9 678 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-215ENST00000641371 MLECQ14165 292 aa13.4□□□□□ -0.26
PHGDH-215ENST00000641371 TNRQ92752 1358 aa13.4□□□□□ -0.26
PHGDH-215ENST00000641371 TESK2Q96S53 571 aa13.39□□□□□ -0.27
PHGDH-215ENST00000641371 A2ML1A8K2U0 1454 aa13.39□□□□□ -0.27
PHGDH-215ENST00000641371 ADGRB1O14514 1584 aa13.38□□□□□ -0.27
PHGDH-215ENST00000641371 CFAP70Q5T0N1 1121 aa13.38□□□□□ -0.27
PHGDH-215ENST00000641371 FBXO31Q5XUX0 539 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-215ENST00000641371 PUS7Q96PZ0 661 aaKnown RBP13.36□□□□□ -0.27
PHGDH-215ENST00000641371 C3P01024 1663 aa13.35□□□□□ -0.27
PHGDH-215ENST00000641371 ILDR1Q86SU0 546 aaPredicted RBP13.35□□□□□ -0.27
PHGDH-215ENST00000641371 RIMS2Q9UQ26 1411 aa13.35□□□□□ -0.27
PHGDH-215ENST00000641371 CENPJQ9HC77 1338 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-215ENST00000641371 UBR1Q8IWV7 1749 aa13.33□□□□□ -0.27
PHGDH-215ENST00000641371 PRKRIP1Q9H875 184 aaPredicted RBP13.33□□□□□ -0.28
PHGDH-215ENST00000641371 QRICH2Q9H0J4 1663 aa13.32□□□□□ -0.28
PHGDH-215ENST00000641371 POLR3GLQ9BT43 218 aa13.32□□□□□ -0.28
PHGDH-215ENST00000641371 ARHGEF28Q8N1W1 1705 aaKnown RBP13.32□□□□□ -0.28
PHGDH-215ENST00000641371 DISP3Q9P2K9 1392 aa13.32□□□□□ -0.28
PHGDH-215ENST00000641371 ALKQ9UM73 1620 aa13.31□□□□□ -0.28
PHGDH-215ENST00000641371 DLC1Q96QB1 1528 aa13.31□□□□□ -0.28
PHGDH-215ENST00000641371 RALBP1Q15311 655 aa13.31□□□□□ -0.28
PHGDH-215ENST00000641371 TMEM2Q9UHN6 1383 aa13.3□□□□□ -0.28
PHGDH-215ENST00000641371 NINLQ9Y2I6 1382 aa13.29□□□□□ -0.28
PHGDH-215ENST00000641371 SETD1BQ9UPS6 1966 aaKnown RBP13.29□□□□□ -0.28
PHGDH-215ENST00000641371 ADAMTSL3P82987 1691 aa13.28□□□□□ -0.28
PHGDH-215ENST00000641371 YTHDC2Q9H6S0 1430 aaKnown RBP13.28□□□□□ -0.28
PHGDH-215ENST00000641371 SLIT1O75093 1534 aa13.28□□□□□ -0.28
PHGDH-215ENST00000641371 KNDC1Q76NI1 1749 aa13.27□□□□□ -0.28
PHGDH-215ENST00000641371 NPC1L1Q9UHC9 1359 aa13.27□□□□□ -0.29
PHGDH-215ENST00000641371 ASXL1Q8IXJ9 1541 aa13.27□□□□□ -0.29
PHGDH-215ENST00000641371 SETD1AO15047 1707 aaKnown RBP13.27□□□□□ -0.29
PHGDH-215ENST00000641371 LRPPRCP42704 1394 aaKnown RBP13.26□□□□□ -0.29
PHGDH-215ENST00000641371 EVC2Q86UK5 1308 aa13.26□□□□□ -0.29
PHGDH-215ENST00000641371 THEMISQ8N1K5 641 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-215ENST00000641371 SIRT1Q96EB6 747 aa13.26□□□□□ -0.29
PHGDH-215ENST00000641371 EID1Q9Y6B2 187 aa13.26□□□□□ -0.29
PHGDH-215ENST00000641371 MYOM1P52179 1685 aa13.25□□□□□ -0.29
PHGDH-215ENST00000641371 RIMS1Q86UR5 1692 aaKnown RBP13.25□□□□□ -0.29
PHGDH-215ENST00000641371 DIP2AQ14689 1571 aa13.25□□□□□ -0.29
PHGDH-215ENST00000641371 ARHGAP23Q9P227 1491 aa13.25□□□□□ -0.29
PHGDH-215ENST00000641371 ABCC11Q96J66 1382 aa13.25□□□□□ -0.29
PHGDH-215ENST00000641371 PLEKHG1Q9ULL1 1385 aa13.25□□□□□ -0.29
PHGDH-215ENST00000641371 TRAK1Q9UPV9 953 aa13.25□□□□□ -0.29
PHGDH-215ENST00000641371 ZNF142P52746 1687 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-215ENST00000641371 NRXN3Q9Y4C0 1643 aa13.24□□□□□ -0.29
PHGDH-215ENST00000641371 PTPRMP28827 1452 aa13.23□□□□□ -0.29
PHGDH-215ENST00000641371 BRD4O60885 1362 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-215ENST00000641371 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
PHGDH-215ENST00000641371 YTHDC1Q96MU7 727 aaKnown RBP13.23□□□□□ -0.29
PHGDH-215ENST00000641371 KNSTRNQ9Y448 316 aa13.23□□□□□ -0.29
PHGDH-215ENST00000641371 TECPR2O15040 1411 aa13.22□□□□□ -0.29
PHGDH-215ENST00000641371 FAM135BQ49AJ0 1406 aa13.22□□□□□ -0.29
PHGDH-215ENST00000641371 ATAD2Q6PL18 1390 aa13.22□□□□□ -0.29
PHGDH-215ENST00000641371 PARD3Q8TEW0 1356 aa13.22□□□□□ -0.29
PHGDH-215ENST00000641371 KDM4FA0A1W2PPD8 638 aa13.22□□□□□ -0.29
PHGDH-215ENST00000641371 PER1O15534 1290 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-215ENST00000641371 TMEM132EQ6IEE7 984 aa13.22□□□□□ -0.29
PHGDH-215ENST00000641371 PANK3Q9H999 370 aa13.22□□□□□ -0.29
PHGDH-215ENST00000641371 CEP170BQ9Y4F5 1589 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-215ENST00000641371 NUTM2DQ5VT03 806 aaPredicted RBP13.21□□□□□ -0.29
PHGDH-215ENST00000641371 CPS1P31327 1500 aa13.2□□□□□ -0.3
PHGDH-215ENST00000641371 NLRP13Q86W25 1043 aa13.2□□□□□ -0.3
PHGDH-215ENST00000641371 MRS2Q9HD23 443 aa13.2□□□□□ -0.3
PHGDH-215ENST00000641371 POGKQ9P215 609 aa13.2□□□□□ -0.3
PHGDH-215ENST00000641371 USP32Q8NFA0 1604 aa13.2□□□□□ -0.3
PHGDH-215ENST00000641371 INSRP06213 1382 aa13.19□□□□□ -0.3
PHGDH-215ENST00000641371 PIK3R4Q99570 1358 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms