RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 MAGI2Q86UL8 1455 aa17.91■□□□□ 0.46
PAX6-280ENST00000640872 FAM161AQ3B820 660 aa17.9■□□□□ 0.46
PAX6-280ENST00000640872 UHRF1BP1LA0JNW5 1464 aa17.9■□□□□ 0.46
PAX6-280ENST00000640872 PRKCSHP14314 528 aaPredicted RBP17.9■□□□□ 0.46
PAX6-280ENST00000640872 PLCH2O75038 1416 aa17.9■□□□□ 0.46
PAX6-280ENST00000640872 SLC4A3P48751 1232 aa17.89■□□□□ 0.45
PAX6-280ENST00000640872 PLXNC1O60486 1568 aa17.88■□□□□ 0.45
PAX6-280ENST00000640872 PPP2R1AP30153 589 aa17.88■□□□□ 0.45
PAX6-280ENST00000640872 TRAPPC8Q9Y2L5 1435 aa17.87■□□□□ 0.45
PAX6-280ENST00000640872 EFCAB2Q5VUJ9 269 aa17.87■□□□□ 0.45
PAX6-280ENST00000640872 IQGAP1P46940 1657 aa17.86■□□□□ 0.45
PAX6-280ENST00000640872 AFAP1Q8N556 730 aa17.86■□□□□ 0.45
PAX6-280ENST00000640872 GOLGA2Q08379 1002 aa17.85■□□□□ 0.45
PAX6-280ENST00000640872 SYNMO15061 1565 aa17.85■□□□□ 0.45
PAX6-280ENST00000640872 WDR43Q15061 677 aaKnown RBP eCLIP17.84■□□□□ 0.45
PAX6-280ENST00000640872 AMER1Q5JTC6 1135 aaPredicted RBP17.84■□□□□ 0.45
PAX6-280ENST00000640872 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.84■□□□□ 0.45
PAX6-280ENST00000640872 BRPF3Q9ULD4 1205 aa17.84■□□□□ 0.45
PAX6-280ENST00000640872 DAXXQ9UER7 740 aaPredicted RBP17.84■□□□□ 0.45
PAX6-280ENST00000640872 FRAT1Q92837 279 aaPredicted RBP17.83■□□□□ 0.45
PAX6-280ENST00000640872 MADDQ8WXG6 1647 aa17.83■□□□□ 0.44
PAX6-280ENST00000640872 PIK3C2GO75747 1445 aa17.83■□□□□ 0.44
PAX6-280ENST00000640872 SLFN5Q08AF3 891 aa17.83■□□□□ 0.44
PAX6-280ENST00000640872 KNSTRNQ9Y448 316 aa17.82■□□□□ 0.44
PAX6-280ENST00000640872 TRMT2AQ8IZ69 625 aaKnown RBP17.82■□□□□ 0.44
PAX6-280ENST00000640872 EIF3AQ14152 1382 aaKnown RBP17.81■□□□□ 0.44
PAX6-280ENST00000640872 ASXL1Q8IXJ9 1541 aa17.81■□□□□ 0.44
PAX6-280ENST00000640872 VIRMAQ69YN4 1812 aaKnown RBP17.81■□□□□ 0.44
PAX6-280ENST00000640872 DUOX2Q9NRD8 1548 aa17.81■□□□□ 0.44
PAX6-280ENST00000640872 ABCC1P33527 1531 aa17.8■□□□□ 0.44
PAX6-280ENST00000640872 MYOM1P52179 1685 aa17.79■□□□□ 0.44
PAX6-280ENST00000640872 NKTRP30414 1462 aaKnown RBP17.78■□□□□ 0.44
PAX6-280ENST00000640872 NPC1L1Q9UHC9 1359 aa17.78■□□□□ 0.44
PAX6-280ENST00000640872 RGS3P49796 1198 aa17.77■□□□□ 0.44
PAX6-280ENST00000640872 FRAT2O75474 233 aaPredicted RBP17.76■□□□□ 0.43
PAX6-280ENST00000640872 RIMBP3CA6NJZ7 1639 aa17.76■□□□□ 0.43
PAX6-280ENST00000640872 RIMBP3BA6NNM3 1639 aa17.76■□□□□ 0.43
PAX6-280ENST00000640872 RIMBP3Q9UFD9 1639 aa17.76■□□□□ 0.43
PAX6-280ENST00000640872 SPHKAPQ2M3C7 1700 aa17.76■□□□□ 0.43
PAX6-280ENST00000640872 SPAG9O60271 1321 aaKnown RBP17.76■□□□□ 0.43
PAX6-280ENST00000640872 SCAF11Q99590 1463 aaKnown RBP17.75■□□□□ 0.43
PAX6-280ENST00000640872 DNAJC5Q9H3Z4 198 aa17.75■□□□□ 0.43
PAX6-280ENST00000640872 SPINK5Q9NQ38 1064 aaPredicted RBP17.75■□□□□ 0.43
PAX6-280ENST00000640872 CDCA8Q53HL2 280 aa17.74■□□□□ 0.43
PAX6-280ENST00000640872 SCAPERQ9BY12 1400 aa17.74■□□□□ 0.43
PAX6-280ENST00000640872 USP19O94966 1318 aa17.72■□□□□ 0.43
PAX6-280ENST00000640872 CCDC146Q8IYE0 955 aa17.72■□□□□ 0.43
PAX6-280ENST00000640872 ASXL2Q76L83 1435 aa17.72■□□□□ 0.43
PAX6-280ENST00000640872 FANCAO15360 1455 aa17.71■□□□□ 0.43
PAX6-280ENST00000640872 BCAR3O75815 825 aa17.71■□□□□ 0.43
PAX6-280ENST00000640872 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.71■□□□□ 0.43
PAX6-280ENST00000640872 CEP152O94986 1710 aa17.71■□□□□ 0.43
PAX6-280ENST00000640872 TRPM2O94759 1503 aa17.71■□□□□ 0.43
PAX6-280ENST00000640872 E9PSI1 815 aa17.7■□□□□ 0.42
PAX6-280ENST00000640872 APAF1O14727 1248 aa17.7■□□□□ 0.42
PAX6-280ENST00000640872 IGHDP01880 384 aa17.69■□□□□ 0.42
PAX6-280ENST00000640872 KDM5AP29375 1690 aaKnown RBP17.69■□□□□ 0.42
PAX6-280ENST00000640872 ZFYVE16Q7Z3T8 1539 aa17.69■□□□□ 0.42
PAX6-280ENST00000640872 CGNL1Q0VF96 1302 aa17.67■□□□□ 0.42
PAX6-280ENST00000640872 NINLQ9Y2I6 1382 aa17.67■□□□□ 0.42
PAX6-280ENST00000640872 NLRP1Q9C000 1473 aa17.67■□□□□ 0.42
PAX6-280ENST00000640872 PDE3AQ14432 1141 aa17.66■□□□□ 0.42
PAX6-280ENST00000640872 STAC3Q96MF2 364 aa17.66■□□□□ 0.42
PAX6-280ENST00000640872 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
PAX6-280ENST00000640872 CLTCL1P53675 1640 aa17.66■□□□□ 0.42
PAX6-280ENST00000640872 KIAA1210Q9ULL0 1709 aa17.66■□□□□ 0.42
PAX6-280ENST00000640872 ARAP3Q8WWN8 1544 aa17.66■□□□□ 0.42
PAX6-280ENST00000640872 NGEFQ8N5V2 710 aa17.66■□□□□ 0.42
PAX6-280ENST00000640872 PTPRTO14522 1441 aa17.65■□□□□ 0.42
PAX6-280ENST00000640872 MAPK8IP3Q9UPT6 1336 aa17.65■□□□□ 0.42
PAX6-280ENST00000640872 ABCA9Q8IUA7 1624 aa17.65■□□□□ 0.42
PAX6-280ENST00000640872 ADGRL1O94910 1474 aa17.64■□□□□ 0.41
PAX6-280ENST00000640872 RTEL1-TNFRSF6BF6WH68 1400 aa17.64■□□□□ 0.41
PAX6-280ENST00000640872 CLUAP1Q96AJ1 413 aa17.64■□□□□ 0.41
PAX6-280ENST00000640872 KIF3BO15066 747 aa17.63■□□□□ 0.41
PAX6-280ENST00000640872 SEC24BO95487 1268 aa17.63■□□□□ 0.41
PAX6-280ENST00000640872 CENPJQ9HC77 1338 aaPredicted RBP17.62■□□□□ 0.41
PAX6-280ENST00000640872 ERVK-7P63135 1459 aa17.62■□□□□ 0.41
PAX6-280ENST00000640872 FAM43AQ8N2R8 423 aa17.61■□□□□ 0.41
PAX6-280ENST00000640872 ATP7AQ04656 1500 aa17.61■□□□□ 0.41
PAX6-280ENST00000640872 DEPDC5O75140 1603 aa17.59■□□□□ 0.41
PAX6-280ENST00000640872 NPM1P06748 294 aaKnown RBP eCLIP17.59■□□□□ 0.41
PAX6-280ENST00000640872 BECN1Q14457 450 aa17.59■□□□□ 0.41
PAX6-280ENST00000640872 NEURL4Q96JN8 1562 aa17.59■□□□□ 0.41
PAX6-280ENST00000640872 POLR3AO14802 1390 aaPredicted RBP17.59■□□□□ 0.41
PAX6-280ENST00000640872 PANK1Q8TE04 598 aa17.59■□□□□ 0.41
PAX6-280ENST00000640872 COG6Q9Y2V7 657 aa17.59■□□□□ 0.41
PAX6-280ENST00000640872 INO80Q9ULG1 1556 aaPredicted RBP17.58■□□□□ 0.41
PAX6-280ENST00000640872 WWC1Q8IX03 1113 aa17.58■□□□□ 0.41
PAX6-280ENST00000640872 POGKQ9P215 609 aa17.58■□□□□ 0.41
PAX6-280ENST00000640872 TET3O43151 1660 aa17.58■□□□□ 0.4
PAX6-280ENST00000640872 ZMYM3Q14202 1370 aa17.58■□□□□ 0.4
PAX6-280ENST00000640872 CARD14Q9BXL6 1004 aa17.58■□□□□ 0.4
PAX6-280ENST00000640872 SHPRHQ149N8 1683 aa17.57■□□□□ 0.4
PAX6-280ENST00000640872 ABCA6Q8N139 1617 aa17.56■□□□□ 0.4
PAX6-280ENST00000640872 ANTXR1Q9H6X2 564 aa17.56■□□□□ 0.4
PAX6-280ENST00000640872 CANXP27824 592 aaKnown RBP17.55■□□□□ 0.4
PAX6-280ENST00000640872 MAP3K4Q9Y6R4 1608 aa17.55■□□□□ 0.4
PAX6-280ENST00000640872 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
PAX6-280ENST00000640872 AAMPQ13685 434 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms