RNA–Protein interactions for RNA: ENST00000640853.1

LPP-222, Transcript of LIM domain containing preferred translocation partner in lipoma, human

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LPP-222	ENST00000640853	BRD4	O60885	1362 aa	Predicted RBP	3.76	□□□□□ -1.81
LPP-222	ENST00000640853		G3V3G9	751 aa		3.76	□□□□□ -1.81
LPP-222	ENST00000640853	DCAF8	Q5TAQ9	597 aa		3.76	□□□□□ -1.81
LPP-222	ENST00000640853	MAP7D2	Q96T17	732 aa		3.76	□□□□□ -1.81
LPP-222	ENST00000640853	REC8	O95072	547 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	PANK1	Q8TE04	598 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	NUCB2	P80303	420 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	GNL2	Q13823	731 aa	Known RBP	3.75	□□□□□ -1.81
LPP-222	ENST00000640853	GOLGA6L1	Q8N7Z2	621 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	MCM4	P33991	863 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	STK31	Q9BXU1	1019 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	NCAPD3	P42695	1498 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	CLUAP1	Q96AJ1	413 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	PPP4R4	Q6NUP7	873 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	CGNL1	Q0VF96	1302 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	KIF20A	O95235	890 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	RRP7A	Q9Y3A4	280 aa	Known RBP	3.75	□□□□□ -1.81
LPP-222	ENST00000640853	USP47	Q96K76	1375 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	RBM10	P98175	930 aa	Known RBP	3.75	□□□□□ -1.81
LPP-222	ENST00000640853	KIF3A	Q9Y496	699 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	LETM1	O95202	739 aa	Predicted RBP	3.75	□□□□□ -1.81
LPP-222	ENST00000640853	TRAK2	O60296	914 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	PHLDB1	Q86UU1	1377 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	ARHGAP35	Q9NRY4	1499 aa		3.75	□□□□□ -1.81
LPP-222	ENST00000640853	CHMP4BP1	P59074	171 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	PDE3A	Q14432	1141 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	TRIM6-TRIM34	B2RNG4	842 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	FMN1	Q68DA7	1419 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	RBM25	P49756	843 aa	Known RBP	3.74	□□□□□ -1.81
LPP-222	ENST00000640853	C22orf23	Q9BZE7	217 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	DZIP1L	Q8IYY4	767 aa	Known RBP	3.74	□□□□□ -1.81
LPP-222	ENST00000640853	PRM3	Q9NNZ6	103 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	SF3A1	Q15459	793 aa	Known RBP	3.74	□□□□□ -1.81
LPP-222	ENST00000640853	PUS7	Q96PZ0	661 aa	Known RBP	3.74	□□□□□ -1.81
LPP-222	ENST00000640853	DDX19B	Q9UMR2	479 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	WIZ	O95785	1651 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	KANK1	Q14678	1352 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	MEX3C	Q5U5Q3	659 aa	Known RBP	3.74	□□□□□ -1.81
LPP-222	ENST00000640853	ANKRD30A	Q9BXX3	1397 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	RRP9	O43818	475 aa	Known RBP	3.74	□□□□□ -1.81
LPP-222	ENST00000640853	DDX49	Q9Y6V7	483 aa	Known RBP	3.74	□□□□□ -1.81
LPP-222	ENST00000640853		H3BQV1	296 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	TPM3	P06753	285 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	CT47B1	P0C2W7	299 aa	Predicted RBP	3.74	□□□□□ -1.81
LPP-222	ENST00000640853	IFFO2	Q5TF58	517 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	RUFY2	Q8WXA3	655 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	APBB1	O00213	710 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	RAPGEF3	O95398	923 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	TSR1	Q2NL82	804 aa	Known RBP	3.74	□□□□□ -1.81
LPP-222	ENST00000640853	WDR63	Q8IWG1	891 aa		3.74	□□□□□ -1.81
LPP-222	ENST00000640853	TEX35	Q5T0J7	233 aa		3.73	□□□□□ -1.81
LPP-222	ENST00000640853	RIPK4	P57078	832 aa		3.73	□□□□□ -1.81
LPP-222	ENST00000640853	ZNF592	Q92610	1267 aa		3.73	□□□□□ -1.81
LPP-222	ENST00000640853	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	3.73	□□□□□ -1.81
LPP-222	ENST00000640853	FOXD4L1	Q9NU39	408 aa		3.73	□□□□□ -1.81
LPP-222	ENST00000640853	SMARCA2	P51531	1590 aa		3.73	□□□□□ -1.81
LPP-222	ENST00000640853	RRP12	Q5JTH9	1297 aa	Known RBP	3.73	□□□□□ -1.81
LPP-222	ENST00000640853	ISY1	Q9ULR0	285 aa	Known RBP	3.73	□□□□□ -1.81
LPP-222	ENST00000640853	VGF	O15240	615 aa	Predicted RBP	3.73	□□□□□ -1.81
LPP-222	ENST00000640853	RRBP1	Q9P2E9	1410 aa	Known RBP	3.73	□□□□□ -1.81
LPP-222	ENST00000640853	TPM2	P07951	284 aa		3.73	□□□□□ -1.81
LPP-222	ENST00000640853	LRRFIP1	Q32MZ4	808 aa	Known RBP	3.73	□□□□□ -1.81
LPP-222	ENST00000640853	API5	Q9BZZ5	524 aa	Known RBP	3.73	□□□□□ -1.81
LPP-222	ENST00000640853	FAM13B	Q9NYF5	915 aa		3.73	□□□□□ -1.81
LPP-222	ENST00000640853	MCM2	P49736	904 aa		3.73	□□□□□ -1.81
LPP-222	ENST00000640853	INTS3	Q68E01	1043 aa	Known RBP	3.73	□□□□□ -1.81
LPP-222	ENST00000640853	NPM3	O75607	178 aa	Known RBP	3.72	□□□□□ -1.81
LPP-222	ENST00000640853	ZKSCAN1	P17029	563 aa	Predicted RBP	3.72	□□□□□ -1.81
LPP-222	ENST00000640853	RUNDC1	Q96C34	613 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	CCDC39	Q9UFE4	941 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	AMPH	P49418	695 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	G3BP1	Q13283	466 aa	Known RBP eCLIP	3.72	□□□□□ -1.81
LPP-222	ENST00000640853	GPS2	Q13227	327 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	NBPF1	Q3BBV0	1214 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	TMEM132E	Q6IEE7	984 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	SLC4A10	Q6U841	1118 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	HSP90AB4P	Q58FF6	505 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	NASP	P49321	788 aa	Predicted RBP	3.72	□□□□□ -1.81
LPP-222	ENST00000640853	GON4L	Q3T8J9	2241 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	SLFN5	Q08AF3	891 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	LTV1	Q96GA3	475 aa	Predicted RBP	3.72	□□□□□ -1.81
LPP-222	ENST00000640853	KIF16B	Q96L93	1317 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	FOXD4L5	Q5VV16	416 aa	Predicted RBP	3.72	□□□□□ -1.81
LPP-222	ENST00000640853	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	3.72	□□□□□ -1.81
LPP-222	ENST00000640853	NPHP1	O15259	732 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	C20orf194	Q5TEA3	1177 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	ESPN	B1AK53	854 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	FAM184A	Q8NB25	1140 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	NECTIN2	Q92692	538 aa		3.72	□□□□□ -1.81
LPP-222	ENST00000640853	UACA	Q9BZF9	1416 aa		3.71	□□□□□ -1.81
LPP-222	ENST00000640853	EVC2	Q86UK5	1308 aa		3.71	□□□□□ -1.81
LPP-222	ENST00000640853	TOP2A	P11388	1531 aa	Known RBP	3.71	□□□□□ -1.81
LPP-222	ENST00000640853	PPP2R1A	P30153	589 aa		3.71	□□□□□ -1.82
LPP-222	ENST00000640853	PDZRN3	Q9UPQ7	1066 aa		3.71	□□□□□ -1.82
LPP-222	ENST00000640853	RABEP1	Q15276	862 aa		3.71	□□□□□ -1.82
LPP-222	ENST00000640853	AKAP17A	Q02040	695 aa	Known RBP	3.71	□□□□□ -1.82
LPP-222	ENST00000640853	COG3	Q96JB2	828 aa		3.71	□□□□□ -1.82
LPP-222	ENST00000640853	CIZ1	Q9ULV3	898 aa	Predicted RBP	3.71	□□□□□ -1.82
LPP-222	ENST00000640853	GOLGA6L19	H0YKK7	550 aa		3.71	□□□□□ -1.82
LPP-222	ENST00000640853	DIAPH3	Q9NSV4	1193 aa		3.71	□□□□□ -1.82

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