RNA–Protein interactions for RNA: ENST00000640769.1

RTTN-222, Transcript of rotatin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTTN, Length 8,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-222ENST00000640769 SMC2O95347 1197 aa10.46□□□□□ -0.73
RTTN-222ENST00000640769 ANKRD45Q5TZF3 282 aa10.46□□□□□ -0.74
RTTN-222ENST00000640769 FAM177A1Q8N128 213 aaPredicted RBP10.46□□□□□ -0.74
RTTN-222ENST00000640769 CCDC146Q8IYE0 955 aa10.45□□□□□ -0.74
RTTN-222ENST00000640769 TRIM29Q14134 588 aa10.45□□□□□ -0.74
RTTN-222ENST00000640769 NFKBIBQ15653 356 aa10.45□□□□□ -0.74
RTTN-222ENST00000640769 G3V3G9 751 aa10.45□□□□□ -0.74
RTTN-222ENST00000640769 DCAF8Q5TAQ9 597 aa10.45□□□□□ -0.74
RTTN-222ENST00000640769 CEP63Q96MT8 703 aa10.45□□□□□ -0.74
RTTN-222ENST00000640769 FANCIQ9NVI1 1328 aa10.45□□□□□ -0.74
RTTN-222ENST00000640769 BRPF1P55201 1214 aaPredicted RBP10.44□□□□□ -0.74
RTTN-222ENST00000640769 VPS37CA5D8V6 355 aaPredicted RBP10.44□□□□□ -0.74
RTTN-222ENST00000640769 BBXQ8WY36 941 aaPredicted RBP10.44□□□□□ -0.74
RTTN-222ENST00000640769 ANO2Q9NQ90 1003 aa10.44□□□□□ -0.74
RTTN-222ENST00000640769 CCDC47Q96A33 483 aaKnown RBP10.44□□□□□ -0.74
RTTN-222ENST00000640769 TRIM5Q9C035 493 aa10.44□□□□□ -0.74
RTTN-222ENST00000640769 BAZ1BQ9UIG0 1483 aaKnown RBP10.44□□□□□ -0.74
RTTN-222ENST00000640769 SAFB2Q14151 953 aaKnown RBP eCLIP10.44□□□□□ -0.74
RTTN-222ENST00000640769 KDM4AO75164 1064 aa10.44□□□□□ -0.74
RTTN-222ENST00000640769 FRAT2O75474 233 aaPredicted RBP10.44□□□□□ -0.74
RTTN-222ENST00000640769 PLIN1O60240 522 aa10.43□□□□□ -0.74
RTTN-222ENST00000640769 OLFM4Q6UX06 510 aa10.43□□□□□ -0.74
RTTN-222ENST00000640769 RBM33Q96EV2 1170 aaKnown RBP10.43□□□□□ -0.74
RTTN-222ENST00000640769 SRRTQ9BXP5 876 aaKnown RBP10.43□□□□□ -0.74
RTTN-222ENST00000640769 OFD1O75665 1012 aa10.42□□□□□ -0.74
RTTN-222ENST00000640769 CCDC102AQ96A19 550 aa10.42□□□□□ -0.74
RTTN-222ENST00000640769 LRRCC1Q9C099 1032 aa10.42□□□□□ -0.74
RTTN-222ENST00000640769 CFAP45Q9UL16 551 aa10.42□□□□□ -0.74
RTTN-222ENST00000640769 MRE11P49959 708 aa10.42□□□□□ -0.74
RTTN-222ENST00000640769 CAVIN1Q6NZI2 390 aaKnown RBP10.42□□□□□ -0.74
RTTN-222ENST00000640769 CCER2I3L3R5 266 aa10.42□□□□□ -0.74
RTTN-222ENST00000640769 PLCD3Q8N3E9 789 aa10.42□□□□□ -0.74
RTTN-222ENST00000640769 DNAJC2Q99543 621 aaKnown RBP10.42□□□□□ -0.74
RTTN-222ENST00000640769 ERLIN2O94905 339 aa10.42□□□□□ -0.74
RTTN-222ENST00000640769 GTF2A1P52655 376 aaPredicted RBP10.42□□□□□ -0.74
RTTN-222ENST00000640769 SRPK2P78362 688 aaKnown RBP10.41□□□□□ -0.74
RTTN-222ENST00000640769 TMF1P82094 1093 aa10.41□□□□□ -0.74
RTTN-222ENST00000640769 NPM1P06748 294 aaKnown RBP eCLIP10.41□□□□□ -0.74
RTTN-222ENST00000640769 NAT10Q9H0A0 1025 aaKnown RBP10.41□□□□□ -0.74
RTTN-222ENST00000640769 TMX4Q9H1E5 349 aaPredicted RBP10.41□□□□□ -0.74
RTTN-222ENST00000640769 KTN1Q86UP2 1357 aaKnown RBP10.41□□□□□ -0.74
RTTN-222ENST00000640769 CCDC27Q2M243 656 aa10.41□□□□□ -0.74
RTTN-222ENST00000640769 SYNE3Q6ZMZ3 975 aa10.41□□□□□ -0.74
RTTN-222ENST00000640769 CHMP5Q9NZZ3 219 aa10.41□□□□□ -0.74
RTTN-222ENST00000640769 CGNL1Q0VF96 1302 aa10.4□□□□□ -0.74
RTTN-222ENST00000640769 IRX3P78415 501 aaPredicted RBP10.4□□□□□ -0.74
RTTN-222ENST00000640769 EIF3JO75822 258 aaKnown RBP10.4□□□□□ -0.74
RTTN-222ENST00000640769 U2AF1L5P0DN76 240 aaPredicted RBP10.4□□□□□ -0.74
RTTN-222ENST00000640769 U2AF1Q01081 240 aaKnown RBP eCLIP10.4□□□□□ -0.74
RTTN-222ENST00000640769 PABPN1Q86U42 306 aaKnown RBP eCLIP10.4□□□□□ -0.74
RTTN-222ENST00000640769 ZMYND15Q9H091 742 aa10.4□□□□□ -0.74
RTTN-222ENST00000640769 FMNL2Q96PY5 1086 aa10.39□□□□□ -0.75
RTTN-222ENST00000640769 PUS7Q96PZ0 661 aaKnown RBP10.39□□□□□ -0.75
RTTN-222ENST00000640769 GBP2P32456 591 aaPredicted RBP10.39□□□□□ -0.75
RTTN-222ENST00000640769 CENPQQ7L2Z9 268 aaPredicted RBP10.39□□□□□ -0.75
RTTN-222ENST00000640769 TSPY26PQ9H489 355 aa10.39□□□□□ -0.75
RTTN-222ENST00000640769 MAP2K1Q02750 393 aaPredicted RBP10.39□□□□□ -0.75
RTTN-222ENST00000640769 HMGN5P82970 282 aaKnown RBP10.38□□□□□ -0.75
RTTN-222ENST00000640769 TRAK2O60296 914 aa10.38□□□□□ -0.75
RTTN-222ENST00000640769 CCDC181Q5TID7 509 aa10.38□□□□□ -0.75
RTTN-222ENST00000640769 ANKRD18AQ8IVF6 992 aa10.38□□□□□ -0.75
RTTN-222ENST00000640769 DDX11Q96FC9 970 aa10.38□□□□□ -0.75
RTTN-222ENST00000640769 STK31Q9BXU1 1019 aa10.38□□□□□ -0.75
RTTN-222ENST00000640769 RNF187Q5TA31 235 aaPredicted RBP10.38□□□□□ -0.75
RTTN-222ENST00000640769 CENPJQ9HC77 1338 aaPredicted RBP10.38□□□□□ -0.75
RTTN-222ENST00000640769 EZRP15311 586 aaKnown RBP10.38□□□□□ -0.75
RTTN-222ENST00000640769 SMC3Q9UQE7 1217 aa10.38□□□□□ -0.75
RTTN-222ENST00000640769 CCDC73Q6ZRK6 1079 aa10.37□□□□□ -0.75
RTTN-222ENST00000640769 CCDC43Q96MW1 224 aaKnown RBP10.37□□□□□ -0.75
RTTN-222ENST00000640769 CRBNQ96SW2 442 aa10.37□□□□□ -0.75
RTTN-222ENST00000640769 SEPT11Q9NVA2 429 aaKnown RBP10.37□□□□□ -0.75
RTTN-222ENST00000640769 LRRFIP2Q9Y608 721 aaKnown RBP10.37□□□□□ -0.75
RTTN-222ENST00000640769 POLR3GO15318 223 aaPredicted RBP10.37□□□□□ -0.75
RTTN-222ENST00000640769 DHX16O60231 1041 aaKnown RBP10.37□□□□□ -0.75
RTTN-222ENST00000640769 NFXL1Q6ZNB6 911 aa10.37□□□□□ -0.75
RTTN-222ENST00000640769 PDCL2Q8N4E4 241 aa10.37□□□□□ -0.75
RTTN-222ENST00000640769 PAF1Q8N7H5 531 aa10.37□□□□□ -0.75
RTTN-222ENST00000640769 CCDC112Q8NEF3 446 aa10.37□□□□□ -0.75
RTTN-222ENST00000640769 CPLX1O14810 134 aa10.37□□□□□ -0.75
RTTN-222ENST00000640769 SMARCE1Q969G3 411 aa10.37□□□□□ -0.75
RTTN-222ENST00000640769 BCL2L13Q9BXK5 485 aa10.37□□□□□ -0.75
RTTN-222ENST00000640769 TMCO3Q6UWJ1 677 aa10.37□□□□□ -0.75
RTTN-222ENST00000640769 SERPINA10Q9UK55 444 aa10.37□□□□□ -0.75
RTTN-222ENST00000640769 DCAF11Q8TEB1 546 aa10.36□□□□□ -0.75
RTTN-222ENST00000640769 PAXIP1Q6ZW49 1069 aaPredicted RBP10.36□□□□□ -0.75
RTTN-222ENST00000640769 SLC26A8Q96RN1 970 aa10.36□□□□□ -0.75
RTTN-222ENST00000640769 CCP110O43303 1012 aa10.36□□□□□ -0.75
RTTN-222ENST00000640769 SAMD1Q6SPF0 538 aaPredicted RBP10.36□□□□□ -0.75
RTTN-222ENST00000640769 KCNH8Q96L42 1107 aa10.36□□□□□ -0.75
RTTN-222ENST00000640769 UBE2Q2Q8WVN8 375 aa10.35□□□□□ -0.75
RTTN-222ENST00000640769 SHTN1A0MZ66 631 aa10.35□□□□□ -0.75
RTTN-222ENST00000640769 PAK3O75914 559 aaPredicted RBP10.35□□□□□ -0.75
RTTN-222ENST00000640769 CCDC97Q96F63 343 aaPredicted RBP10.35□□□□□ -0.75
RTTN-222ENST00000640769 CCDC113Q9H0I3 377 aa10.35□□□□□ -0.75
RTTN-222ENST00000640769 EXOC6Q8TAG9 804 aa10.35□□□□□ -0.75
RTTN-222ENST00000640769 SPATA24Q86W54 205 aa10.34□□□□□ -0.75
RTTN-222ENST00000640769 SPDYE4A6NLX3 237 aa10.34□□□□□ -0.75
RTTN-222ENST00000640769 SPAG9O60271 1321 aaKnown RBP10.34□□□□□ -0.75
RTTN-222ENST00000640769 SDF4Q9BRK5 362 aa10.34□□□□□ -0.75
RTTN-222ENST00000640769 CALCOCO1Q9P1Z2 691 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms