RNA–Protein interactions for RNA: ENST00000640654.1

RTTN-220, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-220ENST00000640654 RBM46Q8TBY0 533 aaKnown RBP9.72□□□□□ -0.85
RTTN-220ENST00000640654 ANKLE1Q8NAG6 615 aa9.71□□□□□ -0.86
RTTN-220ENST00000640654 TLL1O43897 1013 aa9.69□□□□□ -0.86
RTTN-220ENST00000640654 DGAT1O75907 488 aa9.69□□□□□ -0.86
RTTN-220ENST00000640654 SPRYD7Q5W111 196 aa9.69□□□□□ -0.86
RTTN-220ENST00000640654 ZNF598Q86UK7 904 aaKnown RBP9.69□□□□□ -0.86
RTTN-220ENST00000640654 ZNF775Q96BV0 537 aaPredicted RBP9.69□□□□□ -0.86
RTTN-220ENST00000640654 ACTN4O43707 911 aaKnown RBP9.67□□□□□ -0.86
RTTN-220ENST00000640654 PRR20EP86478 221 aa9.67□□□□□ -0.86
RTTN-220ENST00000640654 PRR20CP86479 221 aa9.67□□□□□ -0.86
RTTN-220ENST00000640654 PRR20DP86480 221 aa9.67□□□□□ -0.86
RTTN-220ENST00000640654 PRR20BP86481 221 aa9.67□□□□□ -0.86
RTTN-220ENST00000640654 PRR20AP86496 221 aa9.67□□□□□ -0.86
RTTN-220ENST00000640654 TRIM67Q6ZTA4 783 aa9.67□□□□□ -0.86
RTTN-220ENST00000640654 TMEM134Q9H6X4 195 aa9.67□□□□□ -0.86
RTTN-220ENST00000640654 CFHP08603 1231 aa9.66□□□□□ -0.86
RTTN-220ENST00000640654 ZNF697Q5TEC3 545 aa9.66□□□□□ -0.86
RTTN-220ENST00000640654 NR1I2O75469 434 aa9.65□□□□□ -0.86
RTTN-220ENST00000640654 S1PR4O95977 384 aa9.65□□□□□ -0.86
RTTN-220ENST00000640654 MYT1Q01538 1121 aa9.65□□□□□ -0.86
RTTN-220ENST00000640654 PTGDRQ13258 359 aa9.65□□□□□ -0.86
RTTN-220ENST00000640654 ARHGEF1Q92888 912 aaKnown RBP9.65□□□□□ -0.86
RTTN-220ENST00000640654 FAM187AA6NFU0 413 aa9.64□□□□□ -0.87
RTTN-220ENST00000640654 ADH1BP00325 375 aa9.64□□□□□ -0.87
RTTN-220ENST00000640654 PPEF1O14829 653 aaPredicted RBP9.63□□□□□ -0.87
RTTN-220ENST00000640654 MLLT3P42568 568 aaPredicted RBP9.63□□□□□ -0.87
RTTN-220ENST00000640654 EMID1Q96A84 441 aaPredicted RBP9.63□□□□□ -0.87
RTTN-220ENST00000640654 ADGRG1Q9Y653 693 aa9.63□□□□□ -0.87
RTTN-220ENST00000640654 NUTM2FA1L443 756 aa9.62□□□□□ -0.87
RTTN-220ENST00000640654 RCCD1A6NED2 376 aa9.62□□□□□ -0.87
RTTN-220ENST00000640654 AMER1Q5JTC6 1135 aaPredicted RBP9.62□□□□□ -0.87
RTTN-220ENST00000640654 RSPH4AQ5TD94 716 aa9.61□□□□□ -0.87
RTTN-220ENST00000640654 LIAT1Q6ZQX7 453 aa9.61□□□□□ -0.87
RTTN-220ENST00000640654 SLC6A16Q9GZN6 736 aa9.61□□□□□ -0.87
RTTN-220ENST00000640654 TNFRSF10AO00220 468 aa9.6□□□□□ -0.87
RTTN-220ENST00000640654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.59□□□□□ -0.87
RTTN-220ENST00000640654 NISCHQ9Y2I1 1504 aa9.57□□□□□ -0.88
RTTN-220ENST00000640654 GDF9O60383 454 aa9.57□□□□□ -0.88
RTTN-220ENST00000640654 FCHSD2O94868 740 aa9.56□□□□□ -0.88
RTTN-220ENST00000640654 LMOD2Q6P5Q4 547 aa9.56□□□□□ -0.88
RTTN-220ENST00000640654 SLC10A3P09131 477 aa9.55□□□□□ -0.88
RTTN-220ENST00000640654 FAM161AQ3B820 660 aa9.55□□□□□ -0.88
RTTN-220ENST00000640654 KCNV2Q8TDN2 545 aa9.55□□□□□ -0.88
RTTN-220ENST00000640654 OATP04181 439 aa9.54□□□□□ -0.88
RTTN-220ENST00000640654 SCUBE3Q8IX30 993 aa9.53□□□□□ -0.88
RTTN-220ENST00000640654 SPSB2Q99619 263 aa9.53□□□□□ -0.88
RTTN-220ENST00000640654 POTECB2RU33 542 aa9.52□□□□□ -0.89
RTTN-220ENST00000640654 FOXC1Q12948 553 aa9.52□□□□□ -0.89
RTTN-220ENST00000640654 ST8SIA5O15466 376 aa9.51□□□□□ -0.89
RTTN-220ENST00000640654 PLA2G2CQ5R387 149 aa9.51□□□□□ -0.89
RTTN-220ENST00000640654 P3H3Q8IVL6 736 aa9.51□□□□□ -0.89
RTTN-220ENST00000640654 PUS10Q3MIT2 529 aaKnown RBP9.5□□□□□ -0.89
RTTN-220ENST00000640654 PXYLP1Q8TE99 480 aa9.5□□□□□ -0.89
RTTN-220ENST00000640654 AAASQ9NRG9 546 aa9.5□□□□□ -0.89
RTTN-220ENST00000640654 RPIAP49247 311 aa9.49□□□□□ -0.89
RTTN-220ENST00000640654 TREML4Q6UXN2 200 aa9.48□□□□□ -0.89
RTTN-220ENST00000640654 CD2BP2O95400 341 aaKnown RBP9.47□□□□□ -0.89
RTTN-220ENST00000640654 RDH13Q8NBN7 331 aa9.47□□□□□ -0.89
RTTN-220ENST00000640654 PKD2L1Q9P0L9 805 aa9.47□□□□□ -0.89
RTTN-220ENST00000640654 HIC1Q14526 733 aa9.46□□□□□ -0.9
RTTN-220ENST00000640654 CYP4X1Q8N118 509 aa9.46□□□□□ -0.9
RTTN-220ENST00000640654 METTL3Q86U44 580 aaKnown RBP9.45□□□□□ -0.9
RTTN-220ENST00000640654 CRIPAKQ8N1N5 446 aa9.45□□□□□ -0.9
RTTN-220ENST00000640654 TSHZ2Q9NRE2 1034 aa9.45□□□□□ -0.9
RTTN-220ENST00000640654 FCF1Q9Y324 198 aaKnown RBP9.45□□□□□ -0.9
RTTN-220ENST00000640654 FMNL1O95466 1100 aaPredicted RBP9.44□□□□□ -0.9
RTTN-220ENST00000640654 AXIN1O15169 862 aa9.43□□□□□ -0.9
RTTN-220ENST00000640654 CTC1Q2NKJ3 1217 aa9.43□□□□□ -0.9
RTTN-220ENST00000640654 RTN4Q9NQC3 1192 aaKnown RBP9.43□□□□□ -0.9
RTTN-220ENST00000640654 ZBTB24O43167 697 aaPredicted RBP9.42□□□□□ -0.9
RTTN-220ENST00000640654 AVPP01185 164 aa9.41□□□□□ -0.9
RTTN-220ENST00000640654 ATP6V1AP38606 617 aa9.41□□□□□ -0.9
RTTN-220ENST00000640654 MORN1Q5T089 497 aa9.41□□□□□ -0.9
RTTN-220ENST00000640654 TOR4AQ9NXH8 423 aa9.41□□□□□ -0.9
RTTN-220ENST00000640654 DAXXQ9UER7 740 aaPredicted RBP9.41□□□□□ -0.9
RTTN-220ENST00000640654 DDX11L8A8MPP1 907 aa9.4□□□□□ -0.9
RTTN-220ENST00000640654 C11orf95C9JLR9 678 aaPredicted RBP9.4□□□□□ -0.9
RTTN-220ENST00000640654 SEMA3EO15041 775 aa9.4□□□□□ -0.9
RTTN-220ENST00000640654 FUT2Q10981 343 aa9.4□□□□□ -0.9
RTTN-220ENST00000640654 SMYD5Q6GMV2 418 aa9.4□□□□□ -0.9
RTTN-220ENST00000640654 SULF1Q8IWU6 871 aa9.4□□□□□ -0.9
RTTN-220ENST00000640654 TTC24A2A3L6 582 aaPredicted RBP9.39□□□□□ -0.91
RTTN-220ENST00000640654 WFS1O76024 890 aa9.39□□□□□ -0.91
RTTN-220ENST00000640654 GMPR2Q9P2T1 348 aaKnown RBP9.38□□□□□ -0.91
RTTN-220ENST00000640654 GNPATO15228 680 aa9.37□□□□□ -0.91
RTTN-220ENST00000640654 GRIPAP1Q4V328 841 aa9.37□□□□□ -0.91
RTTN-220ENST00000640654 THAP11Q96EK4 314 aa9.37□□□□□ -0.91
RTTN-220ENST00000640654 SALL2Q9Y467 1007 aaPredicted RBP9.37□□□□□ -0.91
RTTN-220ENST00000640654 SMCPP49901 116 aaPredicted RBP9.36□□□□□ -0.91
RTTN-220ENST00000640654 LCE2AQ5TA79 106 aaPredicted RBP9.36□□□□□ -0.91
RTTN-220ENST00000640654 DACH1Q9UI36 760 aa9.36□□□□□ -0.91
RTTN-220ENST00000640654 SLC27A5Q9Y2P5 690 aa9.36□□□□□ -0.91
RTTN-220ENST00000640654 FAM160A2Q8N612 972 aaPredicted RBP9.35□□□□□ -0.91
RTTN-220ENST00000640654 GCGRP47871 477 aa9.34□□□□□ -0.91
RTTN-220ENST00000640654 MSS51Q4VC12 460 aa9.34□□□□□ -0.91
RTTN-220ENST00000640654 PRDM9Q9NQV7 894 aa9.34□□□□□ -0.91
RTTN-220ENST00000640654 RBM26Q5T8P6 1007 aaKnown RBP9.33□□□□□ -0.92
RTTN-220ENST00000640654 INSM1Q01101 510 aaPredicted RBP9.32□□□□□ -0.92
RTTN-220ENST00000640654 BRICD5Q6PL45 260 aa9.32□□□□□ -0.92
RTTN-220ENST00000640654 STK17AQ9UEE5 414 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms