RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 GOLGA2Q08379 1002 aa21.69■■□□□ 1.06
HNRNPU-228ENST00000640306 ABCA9Q8IUA7 1624 aa21.68■■□□□ 1.06
HNRNPU-228ENST00000640306 SPAG9O60271 1321 aaKnown RBP21.68■■□□□ 1.06
HNRNPU-228ENST00000640306 EIF2AK4Q9P2K8 1649 aaKnown RBP21.67■■□□□ 1.06
HNRNPU-228ENST00000640306 MAST1Q9Y2H9 1570 aa21.67■■□□□ 1.06
HNRNPU-228ENST00000640306 RGS3P49796 1198 aa21.67■■□□□ 1.06
HNRNPU-228ENST00000640306 SPINK5Q9NQ38 1064 aaPredicted RBP21.67■■□□□ 1.06
HNRNPU-228ENST00000640306 APAF1O14727 1248 aa21.66■■□□□ 1.06
HNRNPU-228ENST00000640306 SCAPERQ9BY12 1400 aa21.66■■□□□ 1.06
HNRNPU-228ENST00000640306 RIMBP3CA6NJZ7 1639 aa21.65■■□□□ 1.06
HNRNPU-228ENST00000640306 RIMBP3BA6NNM3 1639 aa21.65■■□□□ 1.06
HNRNPU-228ENST00000640306 RIMBP3Q9UFD9 1639 aa21.65■■□□□ 1.06
HNRNPU-228ENST00000640306 ADGRL1O94910 1474 aa21.64■■□□□ 1.06
HNRNPU-228ENST00000640306 PLXNC1O60486 1568 aa21.64■■□□□ 1.05
HNRNPU-228ENST00000640306 LAMC1P11047 1609 aa21.64■■□□□ 1.05
HNRNPU-228ENST00000640306 CD109Q6YHK3 1445 aa21.63■■□□□ 1.05
HNRNPU-228ENST00000640306 CFAP70Q5T0N1 1121 aa21.63■■□□□ 1.05
HNRNPU-228ENST00000640306 BCAR3O75815 825 aa21.62■■□□□ 1.05
HNRNPU-228ENST00000640306 ATP10AO60312 1499 aa21.62■■□□□ 1.05
HNRNPU-228ENST00000640306 KDM2BQ8NHM5 1336 aa21.62■■□□□ 1.05
HNRNPU-228ENST00000640306 CDCA8Q53HL2 280 aa21.61■■□□□ 1.05
HNRNPU-228ENST00000640306 ARAP3Q8WWN8 1544 aa21.6■■□□□ 1.05
HNRNPU-228ENST00000640306 KIF3BO15066 747 aa21.6■■□□□ 1.05
HNRNPU-228ENST00000640306 DMRT2Q9Y5R5 561 aa21.6■■□□□ 1.05
HNRNPU-228ENST00000640306 ZNF521Q96K83 1311 aa21.6■■□□□ 1.05
HNRNPU-228ENST00000640306 TNNT2P45379 298 aaPredicted RBP21.59■■□□□ 1.05
HNRNPU-228ENST00000640306 SLFN5Q08AF3 891 aa21.59■■□□□ 1.05
HNRNPU-228ENST00000640306 CENPQQ7L2Z9 268 aaPredicted RBP21.59■■□□□ 1.05
HNRNPU-228ENST00000640306 INSRP06213 1382 aa21.58■■□□□ 1.05
HNRNPU-228ENST00000640306 SCAF11Q99590 1463 aaKnown RBP21.58■■□□□ 1.04
HNRNPU-228ENST00000640306 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.57■■□□□ 1.04
HNRNPU-228ENST00000640306 NEUROD2Q15784 382 aa21.57■■□□□ 1.04
HNRNPU-228ENST00000640306 MADDQ8WXG6 1647 aa21.57■■□□□ 1.04
HNRNPU-228ENST00000640306 RNF17Q9BXT8 1623 aaKnown RBP21.57■■□□□ 1.04
HNRNPU-228ENST00000640306 RTN4Q9NQC3 1192 aaKnown RBP21.56■■□□□ 1.04
HNRNPU-228ENST00000640306 IL27Q8NEV9 243 aa21.56■■□□□ 1.04
HNRNPU-228ENST00000640306 CHGAP10645 457 aaKnown RBP21.55■■□□□ 1.04
HNRNPU-228ENST00000640306 DAXXQ9UER7 740 aaPredicted RBP21.55■■□□□ 1.04
HNRNPU-228ENST00000640306 ZFYVE16Q7Z3T8 1539 aa21.55■■□□□ 1.04
HNRNPU-228ENST00000640306 ADGRF5Q8IZF2 1346 aa21.55■■□□□ 1.04
HNRNPU-228ENST00000640306 ASXL1Q8IXJ9 1541 aa21.55■■□□□ 1.04
HNRNPU-228ENST00000640306 DDRGK1Q96HY6 314 aa21.54■■□□□ 1.04
HNRNPU-228ENST00000640306 CARD14Q9BXL6 1004 aa21.54■■□□□ 1.04
HNRNPU-228ENST00000640306 PPM1GO15355 546 aaPredicted RBP21.53■■□□□ 1.04
HNRNPU-228ENST00000640306 RAPGEF3O95398 923 aa21.53■■□□□ 1.04
HNRNPU-228ENST00000640306 C8orf34Q49A92 452 aa21.52■■□□□ 1.04
HNRNPU-228ENST00000640306 FAM161AQ3B820 660 aa21.52■■□□□ 1.03
HNRNPU-228ENST00000640306 RRP7AQ9Y3A4 280 aaKnown RBP21.51■■□□□ 1.03
HNRNPU-228ENST00000640306 CLTCL1P53675 1640 aa21.51■■□□□ 1.03
HNRNPU-228ENST00000640306 IQGAP1P46940 1657 aa21.5■■□□□ 1.03
HNRNPU-228ENST00000640306 UGGT1Q9NYU2 1555 aa21.5■■□□□ 1.03
HNRNPU-228ENST00000640306 ATP7AQ04656 1500 aa21.5■■□□□ 1.03
HNRNPU-228ENST00000640306 FAM69CQ0P6D2 419 aa21.5■■□□□ 1.03
HNRNPU-228ENST00000640306 SENP3Q9H4L4 574 aaPredicted RBP21.49■■□□□ 1.03
HNRNPU-228ENST00000640306 EIF3AQ14152 1382 aaKnown RBP21.49■■□□□ 1.03
HNRNPU-228ENST00000640306 CANXP27824 592 aaKnown RBP21.49■■□□□ 1.03
HNRNPU-228ENST00000640306 RTEL1-TNFRSF6BF6WH68 1400 aa21.49■■□□□ 1.03
HNRNPU-228ENST00000640306 PIK3C2GO75747 1445 aa21.48■■□□□ 1.03
HNRNPU-228ENST00000640306 TRPM2O94759 1503 aa21.48■■□□□ 1.03
HNRNPU-228ENST00000640306 SYNMO15061 1565 aa21.48■■□□□ 1.03
HNRNPU-228ENST00000640306 FRAT1Q92837 279 aaPredicted RBP21.48■■□□□ 1.03
HNRNPU-228ENST00000640306 IGHDP01880 384 aa21.47■■□□□ 1.03
HNRNPU-228ENST00000640306 PANK1Q8TE04 598 aa21.47■■□□□ 1.03
HNRNPU-228ENST00000640306 NFKBIBQ15653 356 aa21.47■■□□□ 1.03
HNRNPU-228ENST00000640306 TRAK1Q9UPV9 953 aa21.46■■□□□ 1.03
HNRNPU-228ENST00000640306 COG6Q9Y2V7 657 aa21.46■■□□□ 1.03
HNRNPU-228ENST00000640306 KANK1Q14678 1352 aa21.46■■□□□ 1.03
HNRNPU-228ENST00000640306 TRMT2AQ8IZ69 625 aaKnown RBP21.46■■□□□ 1.03
HNRNPU-228ENST00000640306 USP35Q9P2H5 1018 aa21.46■■□□□ 1.03
HNRNPU-228ENST00000640306 INO80Q9ULG1 1556 aaPredicted RBP21.45■■□□□ 1.02
HNRNPU-228ENST00000640306 NKTRP30414 1462 aaKnown RBP21.45■■□□□ 1.02
HNRNPU-228ENST00000640306 PTPRTO14522 1441 aa21.45■■□□□ 1.02
HNRNPU-228ENST00000640306 E9PSI1 815 aa21.45■■□□□ 1.02
HNRNPU-228ENST00000640306 SPHKAPQ2M3C7 1700 aa21.44■■□□□ 1.02
HNRNPU-228ENST00000640306 ZNF518AQ6AHZ1 1483 aa21.44■■□□□ 1.02
HNRNPU-228ENST00000640306 BCL2L13Q9BXK5 485 aa21.43■■□□□ 1.02
HNRNPU-228ENST00000640306 MYOM1P52179 1685 aa21.42■■□□□ 1.02
HNRNPU-228ENST00000640306 SLC12A5Q9H2X9 1139 aa21.42■■□□□ 1.02
HNRNPU-228ENST00000640306 ERVK-7P63135 1459 aa21.42■■□□□ 1.02
HNRNPU-228ENST00000640306 POGZQ7Z3K3 1410 aa21.42■■□□□ 1.02
HNRNPU-228ENST00000640306 TMEM132EQ6IEE7 984 aa21.42■■□□□ 1.02
HNRNPU-228ENST00000640306 NUTM2DQ5VT03 806 aaPredicted RBP21.41■■□□□ 1.02
HNRNPU-228ENST00000640306 WWC1Q8IX03 1113 aa21.41■■□□□ 1.02
HNRNPU-228ENST00000640306 CENPJQ9HC77 1338 aaPredicted RBP21.4■■□□□ 1.02
HNRNPU-228ENST00000640306 MORC1Q86VD1 984 aa21.4■■□□□ 1.02
HNRNPU-228ENST00000640306 TNNQ9UQP3 1299 aa21.4■■□□□ 1.02
HNRNPU-228ENST00000640306 CEP152O94986 1710 aa21.4■■□□□ 1.02
HNRNPU-228ENST00000640306 KIDINS220Q9ULH0 1771 aa21.39■■□□□ 1.01
HNRNPU-228ENST00000640306 STAC3Q96MF2 364 aa21.39■■□□□ 1.01
HNRNPU-228ENST00000640306 NPC1L1Q9UHC9 1359 aa21.38■■□□□ 1.01
HNRNPU-228ENST00000640306 KDM5AP29375 1690 aaKnown RBP21.37■■□□□ 1.01
HNRNPU-228ENST00000640306 CLUAP1Q96AJ1 413 aa21.37■■□□□ 1.01
HNRNPU-228ENST00000640306 SEC24BO95487 1268 aa21.36■■□□□ 1.01
HNRNPU-228ENST00000640306 FRAT2O75474 233 aaPredicted RBP21.36■■□□□ 1.01
HNRNPU-228ENST00000640306 GGT6Q6P531 493 aa21.36■■□□□ 1.01
HNRNPU-228ENST00000640306 NSD3Q9BZ95 1437 aa21.35■■□□□ 1.01
HNRNPU-228ENST00000640306 BRPF3Q9ULD4 1205 aa21.35■■□□□ 1.01
HNRNPU-228ENST00000640306 GSE1Q14687 1217 aa21.34■■□□□ 1.01
HNRNPU-228ENST00000640306 TCP11L2Q8N4U5 519 aa21.34■■□□□ 1.01
HNRNPU-228ENST00000640306 NEO1Q92859 1461 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms