RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 SLC4A3P48751 1232 aa12.22□□□□□ -0.45
CCDC7-216ENST00000640058 APLP1P51693 650 aa12.19□□□□□ -0.46
CCDC7-216ENST00000640058 MAP2K5Q13163 448 aa12.19□□□□□ -0.46
CCDC7-216ENST00000640058 PHOX2BQ99453 314 aa12.18□□□□□ -0.46
CCDC7-216ENST00000640058 IRF6O14896 467 aa12.14□□□□□ -0.47
CCDC7-216ENST00000640058 ZC3H15Q8WU90 426 aaKnown RBP12.14□□□□□ -0.47
CCDC7-216ENST00000640058 NECTIN2Q92692 538 aa12.14□□□□□ -0.47
CCDC7-216ENST00000640058 CCDC102AQ96A19 550 aa12.14□□□□□ -0.47
CCDC7-216ENST00000640058 ITGBL1O95965 494 aaPredicted RBP12.13□□□□□ -0.47
CCDC7-216ENST00000640058 SLC10A3P09131 477 aa12.13□□□□□ -0.47
CCDC7-216ENST00000640058 MTRQ99707 1265 aa12.12□□□□□ -0.47
CCDC7-216ENST00000640058 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
CCDC7-216ENST00000640058 CFHP08603 1231 aa12.11□□□□□ -0.47
CCDC7-216ENST00000640058 KCNC4Q03721 635 aa12.11□□□□□ -0.47
CCDC7-216ENST00000640058 KRI1Q8N9T8 703 aaKnown RBP12.11□□□□□ -0.47
CCDC7-216ENST00000640058 DAXXQ9UER7 740 aaPredicted RBP12.11□□□□□ -0.47
CCDC7-216ENST00000640058 COPS2P61201 443 aa12.1□□□□□ -0.47
CCDC7-216ENST00000640058 DDX11L8A8MPP1 907 aa12.09□□□□□ -0.47
CCDC7-216ENST00000640058 TJAP1Q5JTD0 557 aa12.09□□□□□ -0.47
CCDC7-216ENST00000640058 RDH13Q8NBN7 331 aa12.09□□□□□ -0.47
CCDC7-216ENST00000640058 KMT5BQ4FZB7 885 aa12.08□□□□□ -0.48
CCDC7-216ENST00000640058 ZMYND10O75800 440 aa12.07□□□□□ -0.48
CCDC7-216ENST00000640058 IFFO2Q5TF58 517 aa12.07□□□□□ -0.48
CCDC7-216ENST00000640058 BARGINQ6ZT62 677 aa12.07□□□□□ -0.48
CCDC7-216ENST00000640058 ZNF516Q92618 1163 aa12.07□□□□□ -0.48
CCDC7-216ENST00000640058 BCANQ96GW7 911 aa12.07□□□□□ -0.48
CCDC7-216ENST00000640058 MDM2Q00987 491 aaPredicted RBP12.06□□□□□ -0.48
CCDC7-216ENST00000640058 PRR14Q9BWN1 585 aa12.06□□□□□ -0.48
CCDC7-216ENST00000640058 IL21Q9HBE4 155 aa12.06□□□□□ -0.48
CCDC7-216ENST00000640058 PCDHB3Q9Y5E6 796 aa12.06□□□□□ -0.48
CCDC7-216ENST00000640058 A0A0G2JS52 829 aa12.04□□□□□ -0.48
CCDC7-216ENST00000640058 BLOC1S3Q6QNY0 202 aa12.04□□□□□ -0.48
CCDC7-216ENST00000640058 ACTN4O43707 911 aaKnown RBP12.03□□□□□ -0.48
CCDC7-216ENST00000640058 RSPH4AQ5TD94 716 aa12.03□□□□□ -0.48
CCDC7-216ENST00000640058 SULF1Q8IWU6 871 aa12.01□□□□□ -0.49
CCDC7-216ENST00000640058 NKX2-3Q8TAU0 364 aa12□□□□□ -0.49
CCDC7-216ENST00000640058 PUS10Q3MIT2 529 aaKnown RBP11.99□□□□□ -0.49
CCDC7-216ENST00000640058 TLL1O43897 1013 aa11.97□□□□□ -0.49
CCDC7-216ENST00000640058 ZPR1O75312 459 aa11.97□□□□□ -0.49
CCDC7-216ENST00000640058 GPCPD1Q9NPB8 672 aa11.96□□□□□ -0.49
CCDC7-216ENST00000640058 CLCN1P35523 988 aa11.95□□□□□ -0.5
CCDC7-216ENST00000640058 GCGRP47871 477 aa11.95□□□□□ -0.5
CCDC7-216ENST00000640058 FUT2Q10981 343 aa11.95□□□□□ -0.5
CCDC7-216ENST00000640058 REPIN1Q9BWE0 567 aaKnown RBP11.95□□□□□ -0.5
CCDC7-216ENST00000640058 CD46P15529 392 aa11.94□□□□□ -0.5
CCDC7-216ENST00000640058 TTLL12Q14166 644 aaPredicted RBP11.94□□□□□ -0.5
CCDC7-216ENST00000640058 SLC24A3Q9HC58 644 aa11.92□□□□□ -0.5
CCDC7-216ENST00000640058 NR1I2O75469 434 aa11.91□□□□□ -0.5
CCDC7-216ENST00000640058 FAM217BQ9NTX9 383 aaPredicted RBP11.91□□□□□ -0.5
CCDC7-216ENST00000640058 PPP1R18Q6NYC8 613 aa11.9□□□□□ -0.5
CCDC7-216ENST00000640058 AK7Q96M32 723 aa11.9□□□□□ -0.5
CCDC7-216ENST00000640058 TMUB1Q9BVT8 246 aa11.9□□□□□ -0.5
CCDC7-216ENST00000640058 TRIM66O15016 1216 aa11.89□□□□□ -0.51
CCDC7-216ENST00000640058 ATP6V1AP38606 617 aa11.89□□□□□ -0.51
CCDC7-216ENST00000640058 AMHR2Q16671 573 aa11.88□□□□□ -0.51
CCDC7-216ENST00000640058 MORN1Q5T089 497 aa11.88□□□□□ -0.51
CCDC7-216ENST00000640058 SCUBE3Q8IX30 993 aa11.88□□□□□ -0.51
CCDC7-216ENST00000640058 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.87□□□□□ -0.51
CCDC7-216ENST00000640058 KDM4AO75164 1064 aa11.86□□□□□ -0.51
CCDC7-216ENST00000640058 SSTR3P32745 418 aaPredicted RBP11.86□□□□□ -0.51
CCDC7-216ENST00000640058 GIGYF2Q6Y7W6 1299 aaKnown RBP11.86□□□□□ -0.51
CCDC7-216ENST00000640058 PARP9Q8IXQ6 854 aa11.85□□□□□ -0.51
CCDC7-216ENST00000640058 SLC27A5Q9Y2P5 690 aa11.85□□□□□ -0.51
CCDC7-216ENST00000640058 S1PR4O95977 384 aa11.84□□□□□ -0.51
CCDC7-216ENST00000640058 ADH1BP00325 375 aa11.84□□□□□ -0.51
CCDC7-216ENST00000640058 HLA-CQ95604 372 aa11.84□□□□□ -0.51
CCDC7-216ENST00000640058 GGCXP38435 758 aa11.83□□□□□ -0.52
CCDC7-216ENST00000640058 RGS20O76081 388 aa11.82□□□□□ -0.52
CCDC7-216ENST00000640058 GRIPAP1Q4V328 841 aa11.82□□□□□ -0.52
CCDC7-216ENST00000640058 SPSB2Q99619 263 aa11.82□□□□□ -0.52
CCDC7-216ENST00000640058 PPEF1O14829 653 aaPredicted RBP11.81□□□□□ -0.52
CCDC7-216ENST00000640058 NUTM1Q86Y26 1132 aa11.81□□□□□ -0.52
CCDC7-216ENST00000640058 GUCA2AQ02747 115 aa11.8□□□□□ -0.52
CCDC7-216ENST00000640058 PDE4DQ08499 809 aa11.8□□□□□ -0.52
CCDC7-216ENST00000640058 RNF19BQ6ZMZ0 732 aa11.8□□□□□ -0.52
CCDC7-216ENST00000640058 RNF223E7ERA6 249 aa11.79□□□□□ -0.52
CCDC7-216ENST00000640058 HOXA2O43364 376 aa11.79□□□□□ -0.52
CCDC7-216ENST00000640058 SLC6A16Q9GZN6 736 aa11.79□□□□□ -0.52
CCDC7-216ENST00000640058 FMNL1O95466 1100 aaPredicted RBP11.78□□□□□ -0.52
CCDC7-216ENST00000640058 THAP11Q96EK4 314 aa11.78□□□□□ -0.52
CCDC7-216ENST00000640058 PRKD2Q9BZL6 878 aa11.78□□□□□ -0.52
CCDC7-216ENST00000640058 MS4A1P11836 297 aa11.77□□□□□ -0.53
CCDC7-216ENST00000640058 USP46P62068 366 aa11.77□□□□□ -0.53
CCDC7-216ENST00000640058 BEGAINQ9BUH8 593 aa11.77□□□□□ -0.53
CCDC7-216ENST00000640058 PRDM9Q9NQV7 894 aa11.76□□□□□ -0.53
CCDC7-216ENST00000640058 BRICD5Q6PL45 260 aa11.75□□□□□ -0.53
CCDC7-216ENST00000640058 SPIRE2Q8WWL2 714 aa11.75□□□□□ -0.53
CCDC7-216ENST00000640058 FAM160A2Q8N612 972 aaPredicted RBP11.73□□□□□ -0.53
CCDC7-216ENST00000640058 Q3C1V9 767 aa11.72□□□□□ -0.53
CCDC7-216ENST00000640058 NDUFV2P19404 249 aa11.71□□□□□ -0.53
CCDC7-216ENST00000640058 ANKLE1Q8NAG6 615 aa11.71□□□□□ -0.53
CCDC7-216ENST00000640058 SYMPKQ92797 1274 aaKnown RBP11.71□□□□□ -0.53
CCDC7-216ENST00000640058 SALL2Q9Y467 1007 aaPredicted RBP11.71□□□□□ -0.53
CCDC7-216ENST00000640058 FDX1P10109 184 aa11.7□□□□□ -0.54
CCDC7-216ENST00000640058 MOXD2PA6NHM9 499 aa11.69□□□□□ -0.54
CCDC7-216ENST00000640058 TBC1D2Q9BYX2 928 aa11.69□□□□□ -0.54
CCDC7-216ENST00000640058 IRX2Q9BZI1 471 aaPredicted RBP11.69□□□□□ -0.54
CCDC7-216ENST00000640058 PLA2G2CQ5R387 149 aa11.68□□□□□ -0.54
CCDC7-216ENST00000640058 MSS51Q4VC12 460 aa11.67□□□□□ -0.54
CCDC7-216ENST00000640058 EMID1Q96A84 441 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms