RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ADGRF5Q8IZF2 1346 aa20.76■□□□□ 0.91
TRIM3-215ENST00000639856 PREX1Q8TCU6 1659 aa20.75■□□□□ 0.91
TRIM3-215ENST00000639856 IQGAP1P46940 1657 aa20.74■□□□□ 0.91
TRIM3-215ENST00000639856 PPLO60437 1756 aa20.74■□□□□ 0.91
TRIM3-215ENST00000639856 CLTCQ00610 1675 aaKnown RBP20.73■□□□□ 0.91
TRIM3-215ENST00000639856 HNRNPUQ00839 825 aaKnown RBP eCLIP20.72■□□□□ 0.91
TRIM3-215ENST00000639856 MLECQ14165 292 aa20.72■□□□□ 0.91
TRIM3-215ENST00000639856 CCDC184Q52MB2 194 aa20.72■□□□□ 0.91
TRIM3-215ENST00000639856 KIAA1210Q9ULL0 1709 aa20.72■□□□□ 0.91
TRIM3-215ENST00000639856 NRXN1Q9ULB1 1477 aa20.71■□□□□ 0.91
TRIM3-215ENST00000639856 FBXO31Q5XUX0 539 aaPredicted RBP20.7■□□□□ 0.9
TRIM3-215ENST00000639856 TESK2Q96S53 571 aa20.7■□□□□ 0.9
TRIM3-215ENST00000639856 CFAP70Q5T0N1 1121 aa20.69■□□□□ 0.9
TRIM3-215ENST00000639856 IDI1Q13907 227 aa20.69■□□□□ 0.9
TRIM3-215ENST00000639856 MRS2Q9HD23 443 aa20.68■□□□□ 0.9
TRIM3-215ENST00000639856 DISP3Q9P2K9 1392 aa20.68■□□□□ 0.9
TRIM3-215ENST00000639856 MYO5BQ9ULV0 1848 aa20.68■□□□□ 0.9
TRIM3-215ENST00000639856 ERVK-7P63135 1459 aa20.67■□□□□ 0.9
TRIM3-215ENST00000639856 SCAF11Q99590 1463 aaKnown RBP20.67■□□□□ 0.9
TRIM3-215ENST00000639856 PPP6R1Q9UPN7 881 aa20.65■□□□□ 0.9
TRIM3-215ENST00000639856 NEXMIFQ5QGS0 1516 aa20.65■□□□□ 0.9
TRIM3-215ENST00000639856 TRHP20396 242 aaPredicted RBP20.65■□□□□ 0.9
TRIM3-215ENST00000639856 FKBP8Q14318 412 aa20.65■□□□□ 0.9
TRIM3-215ENST00000639856 PIK3C2GO75747 1445 aa20.64■□□□□ 0.89
TRIM3-215ENST00000639856 NUTM2DQ5VT03 806 aaPredicted RBP20.64■□□□□ 0.89
TRIM3-215ENST00000639856 SLC52A1Q9NWF4 448 aa20.64■□□□□ 0.89
TRIM3-215ENST00000639856 TMEM131LA2VDJ0 1609 aa20.63■□□□□ 0.89
TRIM3-215ENST00000639856 RPGRIP1LQ68CZ1 1315 aa20.63■□□□□ 0.89
TRIM3-215ENST00000639856 NEFLP07196 543 aa20.62■□□□□ 0.89
TRIM3-215ENST00000639856 FAM9BQ8IZU0 186 aa20.61■□□□□ 0.89
TRIM3-215ENST00000639856 CNGB1Q14028 1251 aaPredicted RBP20.6■□□□□ 0.89
TRIM3-215ENST00000639856 TMF1P82094 1093 aa20.59■□□□□ 0.89
TRIM3-215ENST00000639856 SPATA31D1Q6ZQQ2 1576 aa20.58■□□□□ 0.89
TRIM3-215ENST00000639856 SETBP1Q9Y6X0 1596 aa20.58■□□□□ 0.89
TRIM3-215ENST00000639856 EIF3AQ14152 1382 aaKnown RBP20.57■□□□□ 0.88
TRIM3-215ENST00000639856 C14orf93Q9H972 538 aaKnown RBP20.57■□□□□ 0.88
TRIM3-215ENST00000639856 ADGRB1O14514 1584 aa20.57■□□□□ 0.88
TRIM3-215ENST00000639856 VGFO15240 615 aaPredicted RBP20.54■□□□□ 0.88
TRIM3-215ENST00000639856 SENP3Q9H4L4 574 aaPredicted RBP20.54■□□□□ 0.88
TRIM3-215ENST00000639856 ZBED9Q6R2W3 1325 aa20.54■□□□□ 0.88
TRIM3-215ENST00000639856 ZMYM3Q14202 1370 aa20.54■□□□□ 0.88
TRIM3-215ENST00000639856 TMEM132EQ6IEE7 984 aa20.54■□□□□ 0.88
TRIM3-215ENST00000639856 ESF1Q9H501 851 aaKnown RBP20.54■□□□□ 0.88
TRIM3-215ENST00000639856 BCANQ96GW7 911 aa20.53■□□□□ 0.88
TRIM3-215ENST00000639856 KTN1Q86UP2 1357 aaKnown RBP20.52■□□□□ 0.88
TRIM3-215ENST00000639856 MYO3AQ8NEV4 1616 aa20.52■□□□□ 0.87
TRIM3-215ENST00000639856 ZFYVE9O95405 1425 aa20.51■□□□□ 0.87
TRIM3-215ENST00000639856 STAG3Q9UJ98 1225 aa20.5■□□□□ 0.87
TRIM3-215ENST00000639856 TRAK1Q9UPV9 953 aa20.5■□□□□ 0.87
TRIM3-215ENST00000639856 DNAJC5Q9H3Z4 198 aa20.49■□□□□ 0.87
TRIM3-215ENST00000639856 A2ML1A8K2U0 1454 aa20.49■□□□□ 0.87
TRIM3-215ENST00000639856 PER1O15534 1290 aaPredicted RBP20.47■□□□□ 0.87
TRIM3-215ENST00000639856 RALBP1Q15311 655 aa20.47■□□□□ 0.87
TRIM3-215ENST00000639856 PANK3Q9H999 370 aa20.47■□□□□ 0.87
TRIM3-215ENST00000639856 ASXL1Q8IXJ9 1541 aa20.46■□□□□ 0.87
TRIM3-215ENST00000639856 MYOM1P52179 1685 aa20.46■□□□□ 0.87
TRIM3-215ENST00000639856 KDM5AP29375 1690 aaKnown RBP20.46■□□□□ 0.87
TRIM3-215ENST00000639856 QRICH2Q9H0J4 1663 aa20.46■□□□□ 0.87
TRIM3-215ENST00000639856 CENPJQ9HC77 1338 aaPredicted RBP20.45■□□□□ 0.86
TRIM3-215ENST00000639856 MYBBP1AQ9BQG0 1328 aaKnown RBP20.44■□□□□ 0.86
TRIM3-215ENST00000639856 TMC1Q8TDI8 760 aa20.44■□□□□ 0.86
TRIM3-215ENST00000639856 ARHGEF28Q8N1W1 1705 aaKnown RBP20.44■□□□□ 0.86
TRIM3-215ENST00000639856 PNISRQ8TF01 805 aaKnown RBP20.44■□□□□ 0.86
TRIM3-215ENST00000639856 BRD4O60885 1362 aaPredicted RBP20.44■□□□□ 0.86
TRIM3-215ENST00000639856 CDCA8Q53HL2 280 aa20.43■□□□□ 0.86
TRIM3-215ENST00000639856 TNRQ92752 1358 aa20.42■□□□□ 0.86
TRIM3-215ENST00000639856 SBNO2Q9Y2G9 1366 aa20.42■□□□□ 0.86
TRIM3-215ENST00000639856 RIMS2Q9UQ26 1411 aa20.41■□□□□ 0.86
TRIM3-215ENST00000639856 PARD3Q8TEW0 1356 aa20.4■□□□□ 0.86
TRIM3-215ENST00000639856 ALKQ9UM73 1620 aa20.39■□□□□ 0.86
TRIM3-215ENST00000639856 FER1L4A9Z1Z3 1794 aa20.39■□□□□ 0.85
TRIM3-215ENST00000639856 CEBPAP49715 358 aaPredicted RBP20.39■□□□□ 0.85
TRIM3-215ENST00000639856 CC2D1BQ5T0F9 858 aaKnown RBP20.38■□□□□ 0.85
TRIM3-215ENST00000639856 STK26Q9P289 416 aa20.38■□□□□ 0.85
TRIM3-215ENST00000639856 LRPPRCP42704 1394 aaKnown RBP20.37■□□□□ 0.85
TRIM3-215ENST00000639856 C3P01024 1663 aa20.37■□□□□ 0.85
TRIM3-215ENST00000639856 UBR1Q8IWV7 1749 aa20.36■□□□□ 0.85
TRIM3-215ENST00000639856 SLC24A1O60721 1099 aa20.35■□□□□ 0.85
TRIM3-215ENST00000639856 ERICH6BQ5W0A0 696 aa20.35■□□□□ 0.85
TRIM3-215ENST00000639856 NLRP13Q86W25 1043 aa20.35■□□□□ 0.85
TRIM3-215ENST00000639856 TSHZ2Q9NRE2 1034 aa20.35■□□□□ 0.85
TRIM3-215ENST00000639856 SETD1AO15047 1707 aaKnown RBP20.34■□□□□ 0.85
TRIM3-215ENST00000639856 PTPRMP28827 1452 aa20.34■□□□□ 0.85
TRIM3-215ENST00000639856 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
TRIM3-215ENST00000639856 SMG6Q86US8 1419 aaKnown RBP20.34■□□□□ 0.85
TRIM3-215ENST00000639856 YTHDC2Q9H6S0 1430 aaKnown RBP20.34■□□□□ 0.85
TRIM3-215ENST00000639856 SAFB2Q14151 953 aaKnown RBP eCLIP20.33■□□□□ 0.85
TRIM3-215ENST00000639856 NRXN3Q9Y4C0 1643 aa20.33■□□□□ 0.84
TRIM3-215ENST00000639856 TULP4Q9NRJ4 1543 aa20.32■□□□□ 0.84
TRIM3-215ENST00000639856 IRX6P78412 446 aaPredicted RBP20.32■□□□□ 0.84
TRIM3-215ENST00000639856 KNSTRNQ9Y448 316 aa20.31■□□□□ 0.84
TRIM3-215ENST00000639856 AMER1Q5JTC6 1135 aaPredicted RBP20.29■□□□□ 0.84
TRIM3-215ENST00000639856 TMEM2Q9UHN6 1383 aa20.28■□□□□ 0.84
TRIM3-215ENST00000639856 NLRP1Q9C000 1473 aa20.28■□□□□ 0.84
TRIM3-215ENST00000639856 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.27■□□□□ 0.84
TRIM3-215ENST00000639856 PRAM1Q96QH2 718 aa20.27■□□□□ 0.84
TRIM3-215ENST00000639856 NUDCQ9Y266 331 aa20.27■□□□□ 0.84
TRIM3-215ENST00000639856 CARD14Q9BXL6 1004 aa20.26■□□□□ 0.83
TRIM3-215ENST00000639856 EVC2Q86UK5 1308 aa20.25■□□□□ 0.83
TRIM3-215ENST00000639856 SLC12A5Q9H2X9 1139 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms