RNA–Protein interactions for RNA: ENST00000639054.1

PAX6-250, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-250ENST00000639054 RALGAPBQ86X10 1494 aa16.71■□□□□ 0.27
PAX6-250ENST00000639054 RPGRIP1LQ68CZ1 1315 aa16.7■□□□□ 0.26
PAX6-250ENST00000639054 HSPA5P11021 654 aaKnown RBP16.7■□□□□ 0.26
PAX6-250ENST00000639054 ROCK2O75116 1388 aaKnown RBP16.69■□□□□ 0.26
PAX6-250ENST00000639054 CFAP70Q5T0N1 1121 aa16.69■□□□□ 0.26
PAX6-250ENST00000639054 CARD11Q9BXL7 1154 aa16.69■□□□□ 0.26
PAX6-250ENST00000639054 MYOM2P54296 1465 aa16.69■□□□□ 0.26
PAX6-250ENST00000639054 UBR1Q8IWV7 1749 aa16.67■□□□□ 0.26
PAX6-250ENST00000639054 PTPRMP28827 1452 aa16.67■□□□□ 0.26
PAX6-250ENST00000639054 STAC3Q96MF2 364 aa16.67■□□□□ 0.26
PAX6-250ENST00000639054 EIF4G2P78344 907 aaKnown RBP eCLIP16.66■□□□□ 0.26
PAX6-250ENST00000639054 NRXN1Q9ULB1 1477 aa16.66■□□□□ 0.26
PAX6-250ENST00000639054 VGFO15240 615 aaPredicted RBP16.66■□□□□ 0.26
PAX6-250ENST00000639054 NLRP1Q9C000 1473 aa16.66■□□□□ 0.26
PAX6-250ENST00000639054 RIMS2Q9UQ26 1411 aa16.65■□□□□ 0.26
PAX6-250ENST00000639054 MYO3AQ8NEV4 1616 aa16.65■□□□□ 0.26
PAX6-250ENST00000639054 KDM4FA0A1W2PPD8 638 aa16.65■□□□□ 0.26
PAX6-250ENST00000639054 PIK3C2GO75747 1445 aa16.64■□□□□ 0.25
PAX6-250ENST00000639054 USP47Q96K76 1375 aa16.64■□□□□ 0.25
PAX6-250ENST00000639054 ZFYVE9O95405 1425 aa16.62■□□□□ 0.25
PAX6-250ENST00000639054 TMEM132EQ6IEE7 984 aa16.62■□□□□ 0.25
PAX6-250ENST00000639054 GPRASP1Q5JY77 1395 aa16.61■□□□□ 0.25
PAX6-250ENST00000639054 C14orf93Q9H972 538 aaKnown RBP16.61■□□□□ 0.25
PAX6-250ENST00000639054 TMEM2Q9UHN6 1383 aa16.61■□□□□ 0.25
PAX6-250ENST00000639054 LTKP29376 864 aa16.6■□□□□ 0.25
PAX6-250ENST00000639054 KDM5AP29375 1690 aaKnown RBP16.6■□□□□ 0.25
PAX6-250ENST00000639054 ST20-MTHFSA0A0A6YYL1 179 aa16.59■□□□□ 0.25
PAX6-250ENST00000639054 CEP170BQ9Y4F5 1589 aaPredicted RBP16.59■□□□□ 0.25
PAX6-250ENST00000639054 KIAA1210Q9ULL0 1709 aa16.59■□□□□ 0.25
PAX6-250ENST00000639054 C11orf95C9JLR9 678 aaPredicted RBP16.58■□□□□ 0.25
PAX6-250ENST00000639054 SETD1BQ9UPS6 1966 aaKnown RBP16.58■□□□□ 0.24
PAX6-250ENST00000639054 TXNDC2Q86VQ3 553 aa16.57■□□□□ 0.24
PAX6-250ENST00000639054 THEMISQ8N1K5 641 aaPredicted RBP16.57■□□□□ 0.24
PAX6-250ENST00000639054 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.56■□□□□ 0.24
PAX6-250ENST00000639054 LAMC1P11047 1609 aa16.56■□□□□ 0.24
PAX6-250ENST00000639054 BCANQ96GW7 911 aa16.55■□□□□ 0.24
PAX6-250ENST00000639054 ALKQ9UM73 1620 aa16.54■□□□□ 0.24
PAX6-250ENST00000639054 ADGRB1O14514 1584 aa16.54■□□□□ 0.24
PAX6-250ENST00000639054 IQGAP1P46940 1657 aa16.54■□□□□ 0.24
PAX6-250ENST00000639054 TRAK1Q9UPV9 953 aa16.54■□□□□ 0.24
PAX6-250ENST00000639054 ARHGAP23Q9P227 1491 aa16.53■□□□□ 0.24
PAX6-250ENST00000639054 HDGFP51858 240 aaKnown RBP16.53■□□□□ 0.24
PAX6-250ENST00000639054 SLIT1O75093 1534 aa16.53■□□□□ 0.24
PAX6-250ENST00000639054 ASXL1Q8IXJ9 1541 aa16.53■□□□□ 0.24
PAX6-250ENST00000639054 ZNF142P52746 1687 aaPredicted RBP16.53■□□□□ 0.24
PAX6-250ENST00000639054 NRXN3Q9Y4C0 1643 aa16.53■□□□□ 0.24
PAX6-250ENST00000639054 SCAF11Q99590 1463 aaKnown RBP16.53■□□□□ 0.24
PAX6-250ENST00000639054 STK26Q9P289 416 aa16.53■□□□□ 0.24
PAX6-250ENST00000639054 WASHC2AQ641Q2 1341 aa16.52■□□□□ 0.24
PAX6-250ENST00000639054 EID1Q9Y6B2 187 aa16.52■□□□□ 0.24
PAX6-250ENST00000639054 SETBP1Q9Y6X0 1596 aa16.52■□□□□ 0.23
PAX6-250ENST00000639054 DIEXFQ68CQ4 756 aaKnown RBP16.52■□□□□ 0.23
PAX6-250ENST00000639054 DDX10Q13206 875 aaKnown RBP16.5■□□□□ 0.23
PAX6-250ENST00000639054 SLC26A8Q96RN1 970 aa16.49■□□□□ 0.23
PAX6-250ENST00000639054 TESK2Q96S53 571 aa16.49■□□□□ 0.23
PAX6-250ENST00000639054 POLR3GLQ9BT43 218 aa16.49■□□□□ 0.23
PAX6-250ENST00000639054 SETD1AO15047 1707 aaKnown RBP16.49■□□□□ 0.23
PAX6-250ENST00000639054 METP08581 1390 aa16.48■□□□□ 0.23
PAX6-250ENST00000639054 PLEKHG1Q9ULL1 1385 aa16.48■□□□□ 0.23
PAX6-250ENST00000639054 KIF7Q2M1P5 1343 aa16.48■□□□□ 0.23
PAX6-250ENST00000639054 ADAMTS13Q76LX8 1427 aa16.47■□□□□ 0.23
PAX6-250ENST00000639054 CCDC7Q96M83 1385 aa16.46■□□□□ 0.23
PAX6-250ENST00000639054 YTHDC2Q9H6S0 1430 aaKnown RBP16.46■□□□□ 0.23
PAX6-250ENST00000639054 HSPA2P54652 639 aa16.45■□□□□ 0.22
PAX6-250ENST00000639054 SAFB2Q14151 953 aaKnown RBP eCLIP16.45■□□□□ 0.22
PAX6-250ENST00000639054 ANKLE2Q86XL3 938 aa16.45■□□□□ 0.22
PAX6-250ENST00000639054 DISP3Q9P2K9 1392 aa16.45■□□□□ 0.22
PAX6-250ENST00000639054 NCKAP5LQ9HCH0 1330 aa16.44■□□□□ 0.22
PAX6-250ENST00000639054 EIF3AQ14152 1382 aaKnown RBP16.44■□□□□ 0.22
PAX6-250ENST00000639054 ARHGEF28Q8N1W1 1705 aaKnown RBP16.43■□□□□ 0.22
PAX6-250ENST00000639054 CENPJQ9HC77 1338 aaPredicted RBP16.43■□□□□ 0.22
PAX6-250ENST00000639054 MED14O60244 1454 aa16.42■□□□□ 0.22
PAX6-250ENST00000639054 POLR1AO95602 1720 aaPredicted RBP16.42■□□□□ 0.22
PAX6-250ENST00000639054 WAPLQ7Z5K2 1190 aa16.41■□□□□ 0.22
PAX6-250ENST00000639054 PRAM1Q96QH2 718 aa16.41■□□□□ 0.22
PAX6-250ENST00000639054 LRPPRCP42704 1394 aaKnown RBP16.41■□□□□ 0.22
PAX6-250ENST00000639054 TMF1P82094 1093 aa16.4■□□□□ 0.22
PAX6-250ENST00000639054 PTPRUQ92729 1446 aa16.4■□□□□ 0.22
PAX6-250ENST00000639054 QRICH2Q9H0J4 1663 aa16.39■□□□□ 0.22
PAX6-250ENST00000639054 TBX22Q9Y458 520 aa16.39■□□□□ 0.21
PAX6-250ENST00000639054 PLEKHH1Q9ULM0 1364 aa16.39■□□□□ 0.21
PAX6-250ENST00000639054 POGKQ9P215 609 aa16.38■□□□□ 0.21
PAX6-250ENST00000639054 LMTK3Q96Q04 1460 aa16.37■□□□□ 0.21
PAX6-250ENST00000639054 ABCC11Q96J66 1382 aa16.37■□□□□ 0.21
PAX6-250ENST00000639054 MINK1Q8N4C8 1332 aaPredicted RBP16.37■□□□□ 0.21
PAX6-250ENST00000639054 NPHP4O75161 1426 aaPredicted RBP16.36■□□□□ 0.21
PAX6-250ENST00000639054 AMOTL2Q9Y2J4 779 aa16.36■□□□□ 0.21
PAX6-250ENST00000639054 ROBO2Q9HCK4 1378 aa16.35■□□□□ 0.21
PAX6-250ENST00000639054 MIER1Q8N108 512 aa16.34■□□□□ 0.21
PAX6-250ENST00000639054 DIP2AQ14689 1571 aa16.33■□□□□ 0.21
PAX6-250ENST00000639054 DLC1Q96QB1 1528 aa16.33■□□□□ 0.2
PAX6-250ENST00000639054 SBNO2Q9Y2G9 1366 aa16.33■□□□□ 0.2
PAX6-250ENST00000639054 KNDC1Q76NI1 1749 aa16.32■□□□□ 0.2
PAX6-250ENST00000639054 TULP4Q9NRJ4 1543 aa16.32■□□□□ 0.2
PAX6-250ENST00000639054 TECPR2O15040 1411 aa16.31■□□□□ 0.2
PAX6-250ENST00000639054 KCNA6P17658 529 aa16.31■□□□□ 0.2
PAX6-250ENST00000639054 CABP2Q9NPB3 220 aa16.31■□□□□ 0.2
PAX6-250ENST00000639054 CPS1P31327 1500 aa16.31■□□□□ 0.2
PAX6-250ENST00000639054 CNGB1Q14028 1251 aaPredicted RBP16.29■□□□□ 0.2
PAX6-250ENST00000639054 RBM33Q96EV2 1170 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms