RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 RIPK4P57078 832 aa20.75■□□□□ 0.91
SCARB2-210ENST00000638567 EPRSP07814 1512 aaKnown RBP20.74■□□□□ 0.91
SCARB2-210ENST00000638567 TCP11L2Q8N4U5 519 aa20.73■□□□□ 0.91
SCARB2-210ENST00000638567 TMEM132EQ6IEE7 984 aa20.73■□□□□ 0.91
SCARB2-210ENST00000638567 BCAR3O75815 825 aa20.72■□□□□ 0.91
SCARB2-210ENST00000638567 DIAPH1O60610 1272 aaKnown RBP20.72■□□□□ 0.91
SCARB2-210ENST00000638567 MTHFSP49914 203 aa20.72■□□□□ 0.91
SCARB2-210ENST00000638567 ABCA10Q8WWZ4 1543 aa20.72■□□□□ 0.91
SCARB2-210ENST00000638567 MAPKBP1O60336 1514 aa20.71■□□□□ 0.91
SCARB2-210ENST00000638567 FOXD4L5Q5VV16 416 aaPredicted RBP20.71■□□□□ 0.91
SCARB2-210ENST00000638567 FOXD4L4Q8WXT5 416 aaPredicted RBP20.71■□□□□ 0.91
SCARB2-210ENST00000638567 LNPKQ9C0E8 428 aa20.71■□□□□ 0.91
SCARB2-210ENST00000638567 ROCK1Q13464 1354 aa20.7■□□□□ 0.9
SCARB2-210ENST00000638567 DDX49Q9Y6V7 483 aaKnown RBP20.7■□□□□ 0.9
SCARB2-210ENST00000638567 ST18O60284 1047 aa20.7■□□□□ 0.9
SCARB2-210ENST00000638567 DNMBPQ6XZF7 1577 aa20.7■□□□□ 0.9
SCARB2-210ENST00000638567 GGNBP2Q9H3C7 697 aa20.7■□□□□ 0.9
SCARB2-210ENST00000638567 CHMP5Q9NZZ3 219 aa20.7■□□□□ 0.9
SCARB2-210ENST00000638567 HECW1Q76N89 1606 aa20.7■□□□□ 0.9
SCARB2-210ENST00000638567 FRAT2O75474 233 aaPredicted RBP20.68■□□□□ 0.9
SCARB2-210ENST00000638567 CHAF1AQ13111 956 aaPredicted RBP20.67■□□□□ 0.9
SCARB2-210ENST00000638567 C22orf23Q9BZE7 217 aa20.67■□□□□ 0.9
SCARB2-210ENST00000638567 NCOA1Q15788 1441 aa20.67■□□□□ 0.9
SCARB2-210ENST00000638567 PEG3Q9GZU2 1588 aa20.67■□□□□ 0.9
SCARB2-210ENST00000638567 SYAP1Q96A49 352 aaPredicted RBP20.67■□□□□ 0.9
SCARB2-210ENST00000638567 ARID3AQ99856 593 aa20.66■□□□□ 0.9
SCARB2-210ENST00000638567 DRC7Q8IY82 874 aa20.65■□□□□ 0.9
SCARB2-210ENST00000638567 KIAA2012Q0VF49 1180 aa20.65■□□□□ 0.9
SCARB2-210ENST00000638567 COG3Q96JB2 828 aa20.64■□□□□ 0.9
SCARB2-210ENST00000638567 CABP2Q9NPB3 220 aa20.64■□□□□ 0.9
SCARB2-210ENST00000638567 ARHGAP5Q13017 1502 aa20.64■□□□□ 0.9
SCARB2-210ENST00000638567 AMPHP49418 695 aa20.64■□□□□ 0.89
SCARB2-210ENST00000638567 SKAP1Q86WV1 359 aa20.64■□□□□ 0.89
SCARB2-210ENST00000638567 NGDNQ8NEJ9 315 aaKnown RBP20.64■□□□□ 0.89
SCARB2-210ENST00000638567 ABCC5O15440 1437 aa20.64■□□□□ 0.89
SCARB2-210ENST00000638567 PDE3AQ14432 1141 aa20.64■□□□□ 0.89
SCARB2-210ENST00000638567 SYNJ2O15056 1496 aa20.64■□□□□ 0.89
SCARB2-210ENST00000638567 PTPN23Q9H3S7 1636 aa20.63■□□□□ 0.89
SCARB2-210ENST00000638567 LTV1Q96GA3 475 aaPredicted RBP20.63■□□□□ 0.89
SCARB2-210ENST00000638567 SLC12A5Q9H2X9 1139 aa20.63■□□□□ 0.89
SCARB2-210ENST00000638567 AAMPQ13685 434 aa20.63■□□□□ 0.89
SCARB2-210ENST00000638567 IL27Q8NEV9 243 aa20.63■□□□□ 0.89
SCARB2-210ENST00000638567 BRPF3Q9ULD4 1205 aa20.63■□□□□ 0.89
SCARB2-210ENST00000638567 KIF16BQ96L93 1317 aa20.63■□□□□ 0.89
SCARB2-210ENST00000638567 RSPH6AQ9H0K4 717 aa20.62■□□□□ 0.89
SCARB2-210ENST00000638567 ERBINQ96RT1 1412 aa20.62■□□□□ 0.89
SCARB2-210ENST00000638567 PDZRN3Q9UPQ7 1066 aa20.62■□□□□ 0.89
SCARB2-210ENST00000638567 PTPRKQ15262 1439 aa20.61■□□□□ 0.89
SCARB2-210ENST00000638567 HMOX1P09601 288 aa20.61■□□□□ 0.89
SCARB2-210ENST00000638567 SKOR2Q2VWA4 1001 aaPredicted RBP20.6■□□□□ 0.89
SCARB2-210ENST00000638567 RILPL2Q969X0 211 aa20.6■□□□□ 0.89
SCARB2-210ENST00000638567 FOXD4L6Q3SYB3 417 aaPredicted RBP20.6■□□□□ 0.89
SCARB2-210ENST00000638567 FOXD4L3Q6VB84 417 aaPredicted RBP20.6■□□□□ 0.89
SCARB2-210ENST00000638567 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
SCARB2-210ENST00000638567 GOLGA6L6A8MZA4 724 aa20.59■□□□□ 0.89
SCARB2-210ENST00000638567 API5Q9BZZ5 524 aaKnown RBP20.59■□□□□ 0.89
SCARB2-210ENST00000638567 RPRD2Q5VT52 1461 aaKnown RBP20.58■□□□□ 0.89
SCARB2-210ENST00000638567 EXOSC9Q06265 439 aaKnown RBP20.58■□□□□ 0.88
SCARB2-210ENST00000638567 C20orf194Q5TEA3 1177 aa20.58■□□□□ 0.88
SCARB2-210ENST00000638567 NRDCO43847 1150 aa20.58■□□□□ 0.88
SCARB2-210ENST00000638567 TSR2Q969E8 191 aaKnown RBP20.56■□□□□ 0.88
SCARB2-210ENST00000638567 UNC13AQ9UPW8 1703 aa20.56■□□□□ 0.88
SCARB2-210ENST00000638567 CHMP4AQ9BY43 222 aa20.55■□□□□ 0.88
SCARB2-210ENST00000638567 SNAPC4Q5SXM2 1469 aa20.55■□□□□ 0.88
SCARB2-210ENST00000638567 KIAA0586Q9BVV6 1533 aa20.54■□□□□ 0.88
SCARB2-210ENST00000638567 GNAI1P63096 354 aa20.54■□□□□ 0.88
SCARB2-210ENST00000638567 MRC2Q9UBG0 1479 aa20.53■□□□□ 0.88
SCARB2-210ENST00000638567 REC8O95072 547 aa20.53■□□□□ 0.88
SCARB2-210ENST00000638567 SLFN5Q08AF3 891 aa20.53■□□□□ 0.88
SCARB2-210ENST00000638567 IFT140Q96RY7 1462 aa20.53■□□□□ 0.88
SCARB2-210ENST00000638567 IQGAP2Q13576 1575 aa20.52■□□□□ 0.87
SCARB2-210ENST00000638567 HSP90AA2PQ14568 343 aaPredicted RBP20.51■□□□□ 0.87
SCARB2-210ENST00000638567 GPATCH3Q96I76 525 aa20.51■□□□□ 0.87
SCARB2-210ENST00000638567 CAMSAP2Q08AD1 1489 aa20.5■□□□□ 0.87
SCARB2-210ENST00000638567 NECTIN2Q92692 538 aa20.5■□□□□ 0.87
SCARB2-210ENST00000638567 EID1Q9Y6B2 187 aa20.5■□□□□ 0.87
SCARB2-210ENST00000638567 TRAK2O60296 914 aa20.48■□□□□ 0.87
SCARB2-210ENST00000638567 CUL7Q14999 1698 aa20.48■□□□□ 0.87
SCARB2-210ENST00000638567 HDAC5Q9UQL6 1122 aa20.48■□□□□ 0.87
SCARB2-210ENST00000638567 PLB1Q6P1J6 1458 aa20.48■□□□□ 0.87
SCARB2-210ENST00000638567 ARHGEF11O15085 1522 aa20.48■□□□□ 0.87
SCARB2-210ENST00000638567 PHF14O94880 888 aa20.47■□□□□ 0.87
SCARB2-210ENST00000638567 PRKAR2BP31323 418 aa20.47■□□□□ 0.87
SCARB2-210ENST00000638567 TRHP20396 242 aaPredicted RBP20.47■□□□□ 0.87
SCARB2-210ENST00000638567 WWC1Q8IX03 1113 aa20.47■□□□□ 0.87
SCARB2-210ENST00000638567 ANO2Q9NQ90 1003 aa20.46■□□□□ 0.87
SCARB2-210ENST00000638567 CSB-PGBD3P0DP91 1061 aa20.46■□□□□ 0.87
SCARB2-210ENST00000638567 CYB5RLQ6IPT4 315 aa20.46■□□□□ 0.87
SCARB2-210ENST00000638567 INTS3Q68E01 1043 aaKnown RBP20.45■□□□□ 0.87
SCARB2-210ENST00000638567 NOB1Q9ULX3 412 aaKnown RBP20.45■□□□□ 0.87
SCARB2-210ENST00000638567 C1orf115Q9H7X2 142 aa20.45■□□□□ 0.86
SCARB2-210ENST00000638567 ZNF330Q9Y3S2 320 aaPredicted RBP20.45■□□□□ 0.86
SCARB2-210ENST00000638567 SCAPERQ9BY12 1400 aa20.45■□□□□ 0.86
SCARB2-210ENST00000638567 HTATSF1O43719 755 aaKnown RBP20.45■□□□□ 0.86
SCARB2-210ENST00000638567 WDR63Q8IWG1 891 aa20.45■□□□□ 0.86
SCARB2-210ENST00000638567 CHMP3Q9Y3E7 222 aa20.45■□□□□ 0.86
SCARB2-210ENST00000638567 FKBP5Q13451 457 aaPredicted RBP20.44■□□□□ 0.86
SCARB2-210ENST00000638567 CSPP1Q1MSJ5 1256 aa20.44■□□□□ 0.86
SCARB2-210ENST00000638567 CDC45O75419 566 aa20.44■□□□□ 0.86
SCARB2-210ENST00000638567 MRE11P49959 708 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms