RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 CLTCQ00610 1675 aaKnown RBP17■□□□□ 0.31
CACNA1D-228ENST00000638120 SCAF11Q99590 1463 aaKnown RBP16.99■□□□□ 0.31
CACNA1D-228ENST00000638120 ERVK-7P63135 1459 aa16.98■□□□□ 0.31
CACNA1D-228ENST00000638120 RPGRIP1LQ68CZ1 1315 aa16.97■□□□□ 0.31
CACNA1D-228ENST00000638120 ADGRF5Q8IZF2 1346 aa16.97■□□□□ 0.31
CACNA1D-228ENST00000638120 CHGAP10645 457 aaKnown RBP16.97■□□□□ 0.31
CACNA1D-228ENST00000638120 TESK2Q96S53 571 aa16.96■□□□□ 0.31
CACNA1D-228ENST00000638120 NEXMIFQ5QGS0 1516 aa16.96■□□□□ 0.31
CACNA1D-228ENST00000638120 SLC52A1Q9NWF4 448 aa16.96■□□□□ 0.3
CACNA1D-228ENST00000638120 PIK3C2GO75747 1445 aa16.95■□□□□ 0.3
CACNA1D-228ENST00000638120 SETBP1Q9Y6X0 1596 aa16.95■□□□□ 0.3
CACNA1D-228ENST00000638120 POLR3GLQ9BT43 218 aa16.95■□□□□ 0.3
CACNA1D-228ENST00000638120 TMEM131LA2VDJ0 1609 aa16.94■□□□□ 0.3
CACNA1D-228ENST00000638120 SPATA31D1Q6ZQQ2 1576 aa16.94■□□□□ 0.3
CACNA1D-228ENST00000638120 IDI1Q13907 227 aa16.93■□□□□ 0.3
CACNA1D-228ENST00000638120 MYO5BQ9ULV0 1848 aa16.92■□□□□ 0.3
CACNA1D-228ENST00000638120 EIF3AQ14152 1382 aaKnown RBP16.92■□□□□ 0.3
CACNA1D-228ENST00000638120 DISP3Q9P2K9 1392 aa16.92■□□□□ 0.3
CACNA1D-228ENST00000638120 CFAP70Q5T0N1 1121 aa16.92■□□□□ 0.3
CACNA1D-228ENST00000638120 PRKRIP1Q9H875 184 aaPredicted RBP16.92■□□□□ 0.3
CACNA1D-228ENST00000638120 TMF1P82094 1093 aa16.9■□□□□ 0.3
CACNA1D-228ENST00000638120 MYO3AQ8NEV4 1616 aa16.9■□□□□ 0.3
CACNA1D-228ENST00000638120 FBXO31Q5XUX0 539 aaPredicted RBP16.89■□□□□ 0.29
CACNA1D-228ENST00000638120 ZFYVE9O95405 1425 aa16.89■□□□□ 0.29
CACNA1D-228ENST00000638120 ADGRB1O14514 1584 aa16.89■□□□□ 0.29
CACNA1D-228ENST00000638120 MLECQ14165 292 aa16.89■□□□□ 0.29
CACNA1D-228ENST00000638120 VGFO15240 615 aaPredicted RBP16.86■□□□□ 0.29
CACNA1D-228ENST00000638120 DNAJC5Q9H3Z4 198 aa16.86■□□□□ 0.29
CACNA1D-228ENST00000638120 C14orf93Q9H972 538 aaKnown RBP16.86■□□□□ 0.29
CACNA1D-228ENST00000638120 TRHP20396 242 aaPredicted RBP16.84■□□□□ 0.29
CACNA1D-228ENST00000638120 ZMYM3Q14202 1370 aa16.83■□□□□ 0.28
CACNA1D-228ENST00000638120 SBNO2Q9Y2G9 1366 aa16.83■□□□□ 0.28
CACNA1D-228ENST00000638120 ESF1Q9H501 851 aaKnown RBP16.83■□□□□ 0.28
CACNA1D-228ENST00000638120 KDM5AP29375 1690 aaKnown RBP16.82■□□□□ 0.28
CACNA1D-228ENST00000638120 A2ML1A8K2U0 1454 aa16.81■□□□□ 0.28
CACNA1D-228ENST00000638120 SLC24A1O60721 1099 aa16.81■□□□□ 0.28
CACNA1D-228ENST00000638120 CDCA8Q53HL2 280 aa16.81■□□□□ 0.28
CACNA1D-228ENST00000638120 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
CACNA1D-228ENST00000638120 MYOM1P52179 1685 aa16.8■□□□□ 0.28
CACNA1D-228ENST00000638120 KTN1Q86UP2 1357 aaKnown RBP16.8■□□□□ 0.28
CACNA1D-228ENST00000638120 QRICH2Q9H0J4 1663 aa16.79■□□□□ 0.28
CACNA1D-228ENST00000638120 NUTM2DQ5VT03 806 aaPredicted RBP16.79■□□□□ 0.28
CACNA1D-228ENST00000638120 ARHGEF28Q8N1W1 1705 aaKnown RBP16.79■□□□□ 0.28
CACNA1D-228ENST00000638120 ASXL1Q8IXJ9 1541 aa16.79■□□□□ 0.28
CACNA1D-228ENST00000638120 CCDC184Q52MB2 194 aa16.78■□□□□ 0.28
CACNA1D-228ENST00000638120 STAG3Q9UJ98 1225 aa16.77■□□□□ 0.28
CACNA1D-228ENST00000638120 CENPJQ9HC77 1338 aaPredicted RBP16.77■□□□□ 0.28
CACNA1D-228ENST00000638120 PER1O15534 1290 aaPredicted RBP16.77■□□□□ 0.27
CACNA1D-228ENST00000638120 MRS2Q9HD23 443 aa16.77■□□□□ 0.27
CACNA1D-228ENST00000638120 TMEM132EQ6IEE7 984 aa16.76■□□□□ 0.27
CACNA1D-228ENST00000638120 TNRQ92752 1358 aa16.75■□□□□ 0.27
CACNA1D-228ENST00000638120 PANK3Q9H999 370 aa16.75■□□□□ 0.27
CACNA1D-228ENST00000638120 TRAK1Q9UPV9 953 aa16.75■□□□□ 0.27
CACNA1D-228ENST00000638120 RIMS2Q9UQ26 1411 aa16.75■□□□□ 0.27
CACNA1D-228ENST00000638120 ALKQ9UM73 1620 aa16.74■□□□□ 0.27
CACNA1D-228ENST00000638120 RALBP1Q15311 655 aa16.74■□□□□ 0.27
CACNA1D-228ENST00000638120 FER1L4A9Z1Z3 1794 aa16.74■□□□□ 0.27
CACNA1D-228ENST00000638120 PARD3Q8TEW0 1356 aa16.73■□□□□ 0.27
CACNA1D-228ENST00000638120 UBR1Q8IWV7 1749 aa16.72■□□□□ 0.27
CACNA1D-228ENST00000638120 C3P01024 1663 aa16.72■□□□□ 0.27
CACNA1D-228ENST00000638120 CNGB1Q14028 1251 aaPredicted RBP16.72■□□□□ 0.27
CACNA1D-228ENST00000638120 GTF3C3Q9Y5Q9 886 aa16.72■□□□□ 0.27
CACNA1D-228ENST00000638120 SETD1AO15047 1707 aaKnown RBP16.72■□□□□ 0.27
CACNA1D-228ENST00000638120 MYBBP1AQ9BQG0 1328 aaKnown RBP16.71■□□□□ 0.27
CACNA1D-228ENST00000638120 NLRP1Q9C000 1473 aa16.69■□□□□ 0.26
CACNA1D-228ENST00000638120 BRD4O60885 1362 aaPredicted RBP16.69■□□□□ 0.26
CACNA1D-228ENST00000638120 NRXN3Q9Y4C0 1643 aa16.69■□□□□ 0.26
CACNA1D-228ENST00000638120 PTPRMP28827 1452 aa16.69■□□□□ 0.26
CACNA1D-228ENST00000638120 YTHDC2Q9H6S0 1430 aaKnown RBP16.68■□□□□ 0.26
CACNA1D-228ENST00000638120 TULP4Q9NRJ4 1543 aa16.68■□□□□ 0.26
CACNA1D-228ENST00000638120 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.67■□□□□ 0.26
CACNA1D-228ENST00000638120 HNRNPUQ00839 825 aaKnown RBP eCLIP16.66■□□□□ 0.26
CACNA1D-228ENST00000638120 FAM9BQ8IZU0 186 aa16.66■□□□□ 0.26
CACNA1D-228ENST00000638120 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
CACNA1D-228ENST00000638120 NPC1L1Q9UHC9 1359 aa16.64■□□□□ 0.25
CACNA1D-228ENST00000638120 TMEM2Q9UHN6 1383 aa16.64■□□□□ 0.25
CACNA1D-228ENST00000638120 NLRP13Q86W25 1043 aa16.64■□□□□ 0.25
CACNA1D-228ENST00000638120 KNSTRNQ9Y448 316 aa16.64■□□□□ 0.25
CACNA1D-228ENST00000638120 CC2D1BQ5T0F9 858 aaKnown RBP16.63■□□□□ 0.25
CACNA1D-228ENST00000638120 TMC1Q8TDI8 760 aa16.63■□□□□ 0.25
CACNA1D-228ENST00000638120 PUS7Q96PZ0 661 aaKnown RBP16.63■□□□□ 0.25
CACNA1D-228ENST00000638120 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
CACNA1D-228ENST00000638120 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
CACNA1D-228ENST00000638120 EVC2Q86UK5 1308 aa16.63■□□□□ 0.25
CACNA1D-228ENST00000638120 HDGFP51858 240 aaKnown RBP16.62■□□□□ 0.25
CACNA1D-228ENST00000638120 STK26Q9P289 416 aa16.62■□□□□ 0.25
CACNA1D-228ENST00000638120 CEBPAP49715 358 aaPredicted RBP16.61■□□□□ 0.25
CACNA1D-228ENST00000638120 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
CACNA1D-228ENST00000638120 LRPPRCP42704 1394 aaKnown RBP16.61■□□□□ 0.25
CACNA1D-228ENST00000638120 KNDC1Q76NI1 1749 aa16.6■□□□□ 0.25
CACNA1D-228ENST00000638120 PRAM1Q96QH2 718 aa16.59■□□□□ 0.25
CACNA1D-228ENST00000638120 SLIT1O75093 1534 aa16.58■□□□□ 0.25
CACNA1D-228ENST00000638120 USP32Q8NFA0 1604 aa16.58■□□□□ 0.25
CACNA1D-228ENST00000638120 ABCC11Q96J66 1382 aa16.58■□□□□ 0.24
CACNA1D-228ENST00000638120 ARHGAP23Q9P227 1491 aa16.58■□□□□ 0.24
CACNA1D-228ENST00000638120 RIMS1Q86UR5 1692 aaKnown RBP16.58■□□□□ 0.24
CACNA1D-228ENST00000638120 ZBED9Q6R2W3 1325 aa16.57■□□□□ 0.24
CACNA1D-228ENST00000638120 SAFB2Q14151 953 aaKnown RBP eCLIP16.56■□□□□ 0.24
CACNA1D-228ENST00000638120 CARD14Q9BXL6 1004 aa16.56■□□□□ 0.24
CACNA1D-228ENST00000638120 POGKQ9P215 609 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms