RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 IQGAP3Q86VI3 1631 aa12.86□□□□□ -0.35
CACNA1A-248ENST00000637774 ABCA9Q8IUA7 1624 aa12.86□□□□□ -0.35
CACNA1A-248ENST00000637774 PPM1GO15355 546 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-248ENST00000637774 NPATQ14207 1427 aa12.85□□□□□ -0.35
CACNA1A-248ENST00000637774 BRD4O60885 1362 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-248ENST00000637774 PPP2R1AP30153 589 aa12.84□□□□□ -0.35
CACNA1A-248ENST00000637774 GPRASP1Q5JY77 1395 aa12.84□□□□□ -0.35
CACNA1A-248ENST00000637774 TSHZ2Q9NRE2 1034 aa12.84□□□□□ -0.35
CACNA1A-248ENST00000637774 SCAF11Q99590 1463 aaKnown RBP12.83□□□□□ -0.35
CACNA1A-248ENST00000637774 NUTM2FA1L443 756 aa12.83□□□□□ -0.36
CACNA1A-248ENST00000637774 PPP4R2Q9NY27 417 aa12.83□□□□□ -0.36
CACNA1A-248ENST00000637774 ARAP3Q8WWN8 1544 aa12.83□□□□□ -0.36
CACNA1A-248ENST00000637774 SLC52A1Q9NWF4 448 aa12.82□□□□□ -0.36
CACNA1A-248ENST00000637774 PRDM15P57071 1507 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-248ENST00000637774 PLIN1O60240 522 aa12.81□□□□□ -0.36
CACNA1A-248ENST00000637774 SLC24A1O60721 1099 aa12.81□□□□□ -0.36
CACNA1A-248ENST00000637774 C14orf93Q9H972 538 aaKnown RBP12.81□□□□□ -0.36
CACNA1A-248ENST00000637774 PTPRTO14522 1441 aa12.81□□□□□ -0.36
CACNA1A-248ENST00000637774 PRAM1Q96QH2 718 aa12.81□□□□□ -0.36
CACNA1A-248ENST00000637774 E9PCH4 1651 aa12.8□□□□□ -0.36
CACNA1A-248ENST00000637774 RCAN3Q9UKA8 241 aa12.8□□□□□ -0.36
CACNA1A-248ENST00000637774 RRP7AQ9Y3A4 280 aaKnown RBP12.8□□□□□ -0.36
CACNA1A-248ENST00000637774 COL17A1Q9UMD9 1497 aaPredicted RBP12.79□□□□□ -0.36
CACNA1A-248ENST00000637774 EVC2Q86UK5 1308 aa12.79□□□□□ -0.36
CACNA1A-248ENST00000637774 APAF1O14727 1248 aa12.79□□□□□ -0.36
CACNA1A-248ENST00000637774 AMER1Q5JTC6 1135 aaPredicted RBP12.79□□□□□ -0.36
CACNA1A-248ENST00000637774 MAGI2Q86UL8 1455 aa12.79□□□□□ -0.36
CACNA1A-248ENST00000637774 U2SURPO15042 1029 aaKnown RBP12.79□□□□□ -0.36
CACNA1A-248ENST00000637774 CEBPAP49715 358 aaPredicted RBP12.79□□□□□ -0.36
CACNA1A-248ENST00000637774 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.79□□□□□ -0.36
CACNA1A-248ENST00000637774 TRPM2O94759 1503 aa12.79□□□□□ -0.36
CACNA1A-248ENST00000637774 CLTCL1P53675 1640 aa12.78□□□□□ -0.36
CACNA1A-248ENST00000637774 MLH3Q9UHC1 1453 aa12.78□□□□□ -0.36
CACNA1A-248ENST00000637774 CARD14Q9BXL6 1004 aa12.78□□□□□ -0.36
CACNA1A-248ENST00000637774 TSPOAP1O95153 1857 aa12.78□□□□□ -0.36
CACNA1A-248ENST00000637774 WAPLQ7Z5K2 1190 aa12.78□□□□□ -0.36
CACNA1A-248ENST00000637774 GGNBP2Q9H3C7 697 aa12.78□□□□□ -0.36
CACNA1A-248ENST00000637774 NEO1Q92859 1461 aa12.77□□□□□ -0.36
CACNA1A-248ENST00000637774 PARD3Q8TEW0 1356 aa12.77□□□□□ -0.37
CACNA1A-248ENST00000637774 KIDINS220Q9ULH0 1771 aa12.76□□□□□ -0.37
CACNA1A-248ENST00000637774 RPGRIP1LQ68CZ1 1315 aa12.76□□□□□ -0.37
CACNA1A-248ENST00000637774 INO80Q9ULG1 1556 aaPredicted RBP12.76□□□□□ -0.37
CACNA1A-248ENST00000637774 TRPM1Q7Z4N2 1603 aa12.76□□□□□ -0.37
CACNA1A-248ENST00000637774 SOX12O15370 315 aa12.76□□□□□ -0.37
CACNA1A-248ENST00000637774 PLEKHG5O94827 1062 aa12.75□□□□□ -0.37
CACNA1A-248ENST00000637774 CANXP27824 592 aaKnown RBP12.75□□□□□ -0.37
CACNA1A-248ENST00000637774 U2AF1L5P0DN76 240 aaPredicted RBP12.75□□□□□ -0.37
CACNA1A-248ENST00000637774 U2AF1Q01081 240 aaKnown RBP eCLIP12.75□□□□□ -0.37
CACNA1A-248ENST00000637774 TXNDC2Q86VQ3 553 aa12.75□□□□□ -0.37
CACNA1A-248ENST00000637774 EIF2AK4Q9P2K8 1649 aaKnown RBP12.75□□□□□ -0.37
CACNA1A-248ENST00000637774 MTHFSP49914 203 aa12.74□□□□□ -0.37
CACNA1A-248ENST00000637774 CFAP53Q96M91 514 aa12.74□□□□□ -0.37
CACNA1A-248ENST00000637774 TET3O43151 1660 aa12.74□□□□□ -0.37
CACNA1A-248ENST00000637774 HECW2Q9P2P5 1572 aa12.73□□□□□ -0.37
CACNA1A-248ENST00000637774 EXOC6Q8TAG9 804 aa12.73□□□□□ -0.37
CACNA1A-248ENST00000637774 CGNL1Q0VF96 1302 aa12.73□□□□□ -0.37
CACNA1A-248ENST00000637774 NSD3Q9BZ95 1437 aa12.73□□□□□ -0.37
CACNA1A-248ENST00000637774 EFCAB6Q5THR3 1501 aa12.72□□□□□ -0.37
CACNA1A-248ENST00000637774 CABP1Q9NZU7 370 aa12.72□□□□□ -0.37
CACNA1A-248ENST00000637774 GOLGA2Q08379 1002 aa12.72□□□□□ -0.37
CACNA1A-248ENST00000637774 SPHKAPQ2M3C7 1700 aa12.72□□□□□ -0.37
CACNA1A-248ENST00000637774 RBM19Q9Y4C8 960 aaKnown RBP12.72□□□□□ -0.37
CACNA1A-248ENST00000637774 FBLN1P23142 703 aa12.71□□□□□ -0.38
CACNA1A-248ENST00000637774 HDGFL2Q7Z4V5 671 aaPredicted RBP12.71□□□□□ -0.38
CACNA1A-248ENST00000637774 SLC26A8Q96RN1 970 aa12.71□□□□□ -0.38
CACNA1A-248ENST00000637774 CDK19Q9BWU1 502 aa12.71□□□□□ -0.38
CACNA1A-248ENST00000637774 CEP152O94986 1710 aa12.7□□□□□ -0.38
CACNA1A-248ENST00000637774 RRP1P56182 461 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-248ENST00000637774 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
CACNA1A-248ENST00000637774 TERF2IPQ9NYB0 399 aa12.7□□□□□ -0.38
CACNA1A-248ENST00000637774 SMG6Q86US8 1419 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-248ENST00000637774 ABCC3O15438 1527 aa12.69□□□□□ -0.38
CACNA1A-248ENST00000637774 PDE3BQ13370 1112 aa12.69□□□□□ -0.38
CACNA1A-248ENST00000637774 PPRC1Q5VV67 1664 aaKnown RBP12.69□□□□□ -0.38
CACNA1A-248ENST00000637774 FRAT1Q92837 279 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-248ENST00000637774 RIMBP3CA6NJZ7 1639 aa12.69□□□□□ -0.38
CACNA1A-248ENST00000637774 RIMBP3BA6NNM3 1639 aa12.69□□□□□ -0.38
CACNA1A-248ENST00000637774 RIMBP3Q9UFD9 1639 aa12.69□□□□□ -0.38
CACNA1A-248ENST00000637774 RNF17Q9BXT8 1623 aaKnown RBP12.69□□□□□ -0.38
CACNA1A-248ENST00000637774 HDGFP51858 240 aaKnown RBP12.68□□□□□ -0.38
CACNA1A-248ENST00000637774 ABCA6Q8N139 1617 aa12.67□□□□□ -0.38
CACNA1A-248ENST00000637774 LRPPRCP42704 1394 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-248ENST00000637774 MADDQ8WXG6 1647 aa12.67□□□□□ -0.38
CACNA1A-248ENST00000637774 CFAP74Q9C0B2 1584 aa12.67□□□□□ -0.38
CACNA1A-248ENST00000637774 NPM2Q86SE8 214 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-248ENST00000637774 FRMPD1Q5SYB0 1578 aa12.66□□□□□ -0.38
CACNA1A-248ENST00000637774 NEFMP07197 916 aa12.66□□□□□ -0.38
CACNA1A-248ENST00000637774 BCL2L13Q9BXK5 485 aa12.66□□□□□ -0.38
CACNA1A-248ENST00000637774 MROH1Q8NDA8 1641 aa12.66□□□□□ -0.38
CACNA1A-248ENST00000637774 ERICH6BQ5W0A0 696 aa12.66□□□□□ -0.38
CACNA1A-248ENST00000637774 LAS1LQ9Y4W2 734 aaKnown RBP12.66□□□□□ -0.38
CACNA1A-248ENST00000637774 ERVK-7P63135 1459 aa12.65□□□□□ -0.38
CACNA1A-248ENST00000637774 NCKAP5LQ9HCH0 1330 aa12.65□□□□□ -0.38
CACNA1A-248ENST00000637774 CRBNQ96SW2 442 aa12.65□□□□□ -0.38
CACNA1A-248ENST00000637774 C14orf37Q86TY3 774 aa12.64□□□□□ -0.39
CACNA1A-248ENST00000637774 ANP32EQ9BTT0 268 aa12.64□□□□□ -0.39
CACNA1A-248ENST00000637774 ZMYM3Q14202 1370 aa12.64□□□□□ -0.39
CACNA1A-248ENST00000637774 KIF1BO60333 1816 aa12.64□□□□□ -0.39
CACNA1A-248ENST00000637774 MAPK8IP3Q9UPT6 1336 aa12.64□□□□□ -0.39
CACNA1A-248ENST00000637774 ASXL1Q8IXJ9 1541 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms