RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 IQGAP1P46940 1657 aa20.88■□□□□ 0.93
SCN8A-214ENST00000637709 PER1O15534 1290 aaPredicted RBP20.88■□□□□ 0.93
SCN8A-214ENST00000637709 TMEM132EQ6IEE7 984 aa20.88■□□□□ 0.93
SCN8A-214ENST00000637709 SALL2Q9Y467 1007 aaPredicted RBP20.88■□□□□ 0.93
SCN8A-214ENST00000637709 DIP2BQ9P265 1576 aa20.86■□□□□ 0.93
SCN8A-214ENST00000637709 NEFLP07196 543 aa20.86■□□□□ 0.93
SCN8A-214ENST00000637709 MLECQ14165 292 aa20.86■□□□□ 0.93
SCN8A-214ENST00000637709 CAMSAP1Q5T5Y3 1602 aa20.85■□□□□ 0.93
SCN8A-214ENST00000637709 PNISRQ8TF01 805 aaKnown RBP20.84■□□□□ 0.93
SCN8A-214ENST00000637709 LMTK2Q8IWU2 1503 aa20.84■□□□□ 0.93
SCN8A-214ENST00000637709 TRAK1Q9UPV9 953 aa20.84■□□□□ 0.93
SCN8A-214ENST00000637709 SCAF11Q99590 1463 aaKnown RBP20.84■□□□□ 0.93
SCN8A-214ENST00000637709 MYBBP1AQ9BQG0 1328 aaKnown RBP20.83■□□□□ 0.93
SCN8A-214ENST00000637709 FBXO31Q5XUX0 539 aaPredicted RBP20.82■□□□□ 0.92
SCN8A-214ENST00000637709 IFT172Q9UG01 1749 aa20.82■□□□□ 0.92
SCN8A-214ENST00000637709 KTN1Q86UP2 1357 aaKnown RBP20.82■□□□□ 0.92
SCN8A-214ENST00000637709 ZBED9Q6R2W3 1325 aa20.8■□□□□ 0.92
SCN8A-214ENST00000637709 ADGRB3O60242 1522 aa20.8■□□□□ 0.92
SCN8A-214ENST00000637709 IDI1Q13907 227 aa20.79■□□□□ 0.92
SCN8A-214ENST00000637709 SYNMO15061 1565 aa20.78■□□□□ 0.92
SCN8A-214ENST00000637709 RALBP1Q15311 655 aa20.78■□□□□ 0.92
SCN8A-214ENST00000637709 GLI2P10070 1586 aa20.77■□□□□ 0.92
SCN8A-214ENST00000637709 SAFB2Q14151 953 aaKnown RBP eCLIP20.77■□□□□ 0.91
SCN8A-214ENST00000637709 PARD3Q8TEW0 1356 aa20.77■□□□□ 0.91
SCN8A-214ENST00000637709 MYO5BQ9ULV0 1848 aa20.76■□□□□ 0.91
SCN8A-214ENST00000637709 MYOM2P54296 1465 aa20.76■□□□□ 0.91
SCN8A-214ENST00000637709 PPLO60437 1756 aa20.76■□□□□ 0.91
SCN8A-214ENST00000637709 KNSTRNQ9Y448 316 aa20.73■□□□□ 0.91
SCN8A-214ENST00000637709 EIF3AQ14152 1382 aaKnown RBP20.73■□□□□ 0.91
SCN8A-214ENST00000637709 NLRP13Q86W25 1043 aa20.72■□□□□ 0.91
SCN8A-214ENST00000637709 KIAA1210Q9ULL0 1709 aa20.72■□□□□ 0.91
SCN8A-214ENST00000637709 BRD4O60885 1362 aaPredicted RBP20.72■□□□□ 0.91
SCN8A-214ENST00000637709 STAC3Q96MF2 364 aa20.71■□□□□ 0.91
SCN8A-214ENST00000637709 STK26Q9P289 416 aa20.71■□□□□ 0.91
SCN8A-214ENST00000637709 MYOM1P52179 1685 aa20.71■□□□□ 0.91
SCN8A-214ENST00000637709 PIK3C2GO75747 1445 aa20.7■□□□□ 0.9
SCN8A-214ENST00000637709 ERVK-7P63135 1459 aa20.7■□□□□ 0.9
SCN8A-214ENST00000637709 KIF13AQ9H1H9 1805 aa20.69■□□□□ 0.9
SCN8A-214ENST00000637709 NRXN1Q9ULB1 1477 aa20.69■□□□□ 0.9
SCN8A-214ENST00000637709 C14orf93Q9H972 538 aaKnown RBP20.68■□□□□ 0.9
SCN8A-214ENST00000637709 NEURL4Q96JN8 1562 aa20.68■□□□□ 0.9
SCN8A-214ENST00000637709 CENPJQ9HC77 1338 aaPredicted RBP20.67■□□□□ 0.9
SCN8A-214ENST00000637709 KDM5AP29375 1690 aaKnown RBP20.67■□□□□ 0.9
SCN8A-214ENST00000637709 AMER1Q5JTC6 1135 aaPredicted RBP20.67■□□□□ 0.9
SCN8A-214ENST00000637709 PIK3C2BO00750 1634 aa20.66■□□□□ 0.9
SCN8A-214ENST00000637709 PREX1Q8TCU6 1659 aa20.66■□□□□ 0.9
SCN8A-214ENST00000637709 LRPPRCP42704 1394 aaKnown RBP20.66■□□□□ 0.9
SCN8A-214ENST00000637709 CARD14Q9BXL6 1004 aa20.65■□□□□ 0.9
SCN8A-214ENST00000637709 NEXMIFQ5QGS0 1516 aa20.64■□□□□ 0.9
SCN8A-214ENST00000637709 CDCA8Q53HL2 280 aa20.64■□□□□ 0.9
SCN8A-214ENST00000637709 STAG3Q9UJ98 1225 aa20.64■□□□□ 0.9
SCN8A-214ENST00000637709 ZMYM4Q5VZL5 1548 aa20.64■□□□□ 0.89
SCN8A-214ENST00000637709 SLC12A5Q9H2X9 1139 aa20.63■□□□□ 0.89
SCN8A-214ENST00000637709 CLTCQ00610 1675 aaKnown RBP20.63■□□□□ 0.89
SCN8A-214ENST00000637709 TNNT2P45379 298 aaPredicted RBP20.63■□□□□ 0.89
SCN8A-214ENST00000637709 ADGRB1O14514 1584 aa20.63■□□□□ 0.89
SCN8A-214ENST00000637709 PLPPR3Q6T4P5 718 aa20.62■□□□□ 0.89
SCN8A-214ENST00000637709 ZC3H13Q5T200 1668 aaKnown RBP20.62■□□□□ 0.89
SCN8A-214ENST00000637709 QRICH2Q9H0J4 1663 aa20.62■□□□□ 0.89
SCN8A-214ENST00000637709 VGFO15240 615 aaPredicted RBP20.62■□□□□ 0.89
SCN8A-214ENST00000637709 PPP2R1AP30153 589 aa20.62■□□□□ 0.89
SCN8A-214ENST00000637709 CDCA7LQ96GN5 454 aa20.59■□□□□ 0.89
SCN8A-214ENST00000637709 ADAMTS8Q9UP79 889 aa20.59■□□□□ 0.89
SCN8A-214ENST00000637709 ARHGAP31Q2M1Z3 1444 aa20.59■□□□□ 0.89
SCN8A-214ENST00000637709 NUDCQ9Y266 331 aa20.59■□□□□ 0.89
SCN8A-214ENST00000637709 CABP2Q9NPB3 220 aa20.58■□□□□ 0.89
SCN8A-214ENST00000637709 SLC52A1Q9NWF4 448 aa20.58■□□□□ 0.89
SCN8A-214ENST00000637709 RPGRIP1LQ68CZ1 1315 aa20.58■□□□□ 0.88
SCN8A-214ENST00000637709 TMEM131LA2VDJ0 1609 aa20.57■□□□□ 0.88
SCN8A-214ENST00000637709 ASXL1Q8IXJ9 1541 aa20.57■□□□□ 0.88
SCN8A-214ENST00000637709 SETBP1Q9Y6X0 1596 aa20.56■□□□□ 0.88
SCN8A-214ENST00000637709 TSHZ2Q9NRE2 1034 aa20.55■□□□□ 0.88
SCN8A-214ENST00000637709 B4GALNT3Q6L9W6 998 aa20.55■□□□□ 0.88
SCN8A-214ENST00000637709 SMG6Q86US8 1419 aaKnown RBP20.55■□□□□ 0.88
SCN8A-214ENST00000637709 MYO3AQ8NEV4 1616 aa20.54■□□□□ 0.88
SCN8A-214ENST00000637709 CCDC146Q8IYE0 955 aa20.54■□□□□ 0.88
SCN8A-214ENST00000637709 MINK1Q8N4C8 1332 aaPredicted RBP20.53■□□□□ 0.88
SCN8A-214ENST00000637709 ARHGEF28Q8N1W1 1705 aaKnown RBP20.53■□□□□ 0.88
SCN8A-214ENST00000637709 PELP1Q8IZL8 1130 aaKnown RBP20.51■□□□□ 0.87
SCN8A-214ENST00000637709 PRAM1Q96QH2 718 aa20.5■□□□□ 0.87
SCN8A-214ENST00000637709 ESF1Q9H501 851 aaKnown RBP20.5■□□□□ 0.87
SCN8A-214ENST00000637709 NSD3Q9BZ95 1437 aa20.5■□□□□ 0.87
SCN8A-214ENST00000637709 WDR43Q15061 677 aaKnown RBP eCLIP20.5■□□□□ 0.87
SCN8A-214ENST00000637709 SRPK2P78362 688 aaKnown RBP20.48■□□□□ 0.87
SCN8A-214ENST00000637709 TULP4Q9NRJ4 1543 aa20.48■□□□□ 0.87
SCN8A-214ENST00000637709 POGKQ9P215 609 aa20.47■□□□□ 0.87
SCN8A-214ENST00000637709 ARHGEF40Q8TER5 1519 aa20.47■□□□□ 0.87
SCN8A-214ENST00000637709 SBNO2Q9Y2G9 1366 aa20.46■□□□□ 0.87
SCN8A-214ENST00000637709 CEBPAP49715 358 aaPredicted RBP20.45■□□□□ 0.86
SCN8A-214ENST00000637709 WAPLQ7Z5K2 1190 aa20.45■□□□□ 0.86
SCN8A-214ENST00000637709 EVC2Q86UK5 1308 aa20.44■□□□□ 0.86
SCN8A-214ENST00000637709 BLMP54132 1417 aaPredicted RBP20.44■□□□□ 0.86
SCN8A-214ENST00000637709 ZMYM3Q14202 1370 aa20.44■□□□□ 0.86
SCN8A-214ENST00000637709 AGLP35573 1532 aa20.43■□□□□ 0.86
SCN8A-214ENST00000637709 MORC1Q86VD1 984 aa20.43■□□□□ 0.86
SCN8A-214ENST00000637709 TRHP20396 242 aaPredicted RBP20.42■□□□□ 0.86
SCN8A-214ENST00000637709 A2ML1A8K2U0 1454 aa20.42■□□□□ 0.86
SCN8A-214ENST00000637709 PPP4R2Q9NY27 417 aa20.42■□□□□ 0.86
SCN8A-214ENST00000637709 YTHDC2Q9H6S0 1430 aaKnown RBP20.41■□□□□ 0.86
SCN8A-214ENST00000637709 REREQ9P2R6 1566 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms