RNA–Protein interactions for RNA: ENST00000637657.1

PCCA-215, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-215ENST00000637657 SHANK2Q9UPX8 1470 aa16.57■□□□□ 0.24
PCCA-215ENST00000637657 ANP32BQ92688 251 aaKnown RBP16.57■□□□□ 0.24
PCCA-215ENST00000637657 CLUAP1Q96AJ1 413 aa16.56■□□□□ 0.24
PCCA-215ENST00000637657 PLEKHH1Q9ULM0 1364 aa16.56■□□□□ 0.24
PCCA-215ENST00000637657 HS1BP3Q53T59 392 aa16.55■□□□□ 0.24
PCCA-215ENST00000637657 CIZ1Q9ULV3 898 aaPredicted RBP16.55■□□□□ 0.24
PCCA-215ENST00000637657 PIK3C2GO75747 1445 aa16.55■□□□□ 0.24
PCCA-215ENST00000637657 OFD1O75665 1012 aa16.55■□□□□ 0.24
PCCA-215ENST00000637657 SMAP1Q8IYB5 467 aaPredicted RBP16.55■□□□□ 0.24
PCCA-215ENST00000637657 IBTKQ9P2D0 1353 aaPredicted RBP16.55■□□□□ 0.24
PCCA-215ENST00000637657 ANKRD50Q9ULJ7 1429 aa16.55■□□□□ 0.24
PCCA-215ENST00000637657 KIAA1211Q6ZU35 1233 aa16.54■□□□□ 0.24
PCCA-215ENST00000637657 PRDM4Q9UKN5 801 aa16.54■□□□□ 0.24
PCCA-215ENST00000637657 PRAG1Q86YV5 1406 aa16.54■□□□□ 0.24
PCCA-215ENST00000637657 E9PSI1 815 aa16.54■□□□□ 0.24
PCCA-215ENST00000637657 ZSCAN30Q86W11 494 aa16.54■□□□□ 0.24
PCCA-215ENST00000637657 ADCY10Q96PN6 1610 aa16.53■□□□□ 0.24
PCCA-215ENST00000637657 NCLP19338 710 aaKnown RBP16.53■□□□□ 0.24
PCCA-215ENST00000637657 GBP4Q96PP9 640 aa16.53■□□□□ 0.24
PCCA-215ENST00000637657 PPP1R9BQ96SB3 815 aa16.53■□□□□ 0.24
PCCA-215ENST00000637657 ADAMTS8Q9UP79 889 aa16.52■□□□□ 0.24
PCCA-215ENST00000637657 PTPRGP23470 1445 aa16.52■□□□□ 0.23
PCCA-215ENST00000637657 NUP160Q12769 1436 aa16.52■□□□□ 0.23
PCCA-215ENST00000637657 NCOA3Q9Y6Q9 1424 aa16.52■□□□□ 0.23
PCCA-215ENST00000637657 ERBB4Q15303 1308 aa16.52■□□□□ 0.23
PCCA-215ENST00000637657 MSNP26038 577 aaKnown RBP16.51■□□□□ 0.23
PCCA-215ENST00000637657 GZF1Q9H116 711 aaPredicted RBP16.51■□□□□ 0.23
PCCA-215ENST00000637657 ABCC10Q5T3U5 1492 aa16.5■□□□□ 0.23
PCCA-215ENST00000637657 NPC1L1Q9UHC9 1359 aa16.5■□□□□ 0.23
PCCA-215ENST00000637657 SEC24BO95487 1268 aa16.5■□□□□ 0.23
PCCA-215ENST00000637657 AMER1Q5JTC6 1135 aaPredicted RBP16.5■□□□□ 0.23
PCCA-215ENST00000637657 ERBINQ96RT1 1412 aa16.5■□□□□ 0.23
PCCA-215ENST00000637657 TMF1P82094 1093 aa16.49■□□□□ 0.23
PCCA-215ENST00000637657 HSCBQ8IWL3 235 aa16.49■□□□□ 0.23
PCCA-215ENST00000637657 IGHDP01880 384 aa16.49■□□□□ 0.23
PCCA-215ENST00000637657 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
PCCA-215ENST00000637657 ARXQ96QS3 562 aa16.48■□□□□ 0.23
PCCA-215ENST00000637657 SYNMO15061 1565 aa16.48■□□□□ 0.23
PCCA-215ENST00000637657 NUP155O75694 1391 aa16.46■□□□□ 0.23
PCCA-215ENST00000637657 RAPGEF6Q8TEU7 1601 aa16.46■□□□□ 0.23
PCCA-215ENST00000637657 CSPP1Q1MSJ5 1256 aa16.46■□□□□ 0.23
PCCA-215ENST00000637657 PANK3Q9H999 370 aa16.46■□□□□ 0.23
PCCA-215ENST00000637657 TROQ12816 1431 aaPredicted RBP16.45■□□□□ 0.22
PCCA-215ENST00000637657 UTP14CQ5TAP6 766 aaKnown RBP16.45■□□□□ 0.22
PCCA-215ENST00000637657 SNX21Q969T3 373 aa16.45■□□□□ 0.22
PCCA-215ENST00000637657 DYNC1I1O14576 645 aa16.45■□□□□ 0.22
PCCA-215ENST00000637657 C22orf23Q9BZE7 217 aa16.45■□□□□ 0.22
PCCA-215ENST00000637657 RWDD1Q9H446 243 aaPredicted RBP16.45■□□□□ 0.22
PCCA-215ENST00000637657 MCM5P33992 734 aa16.44■□□□□ 0.22
PCCA-215ENST00000637657 RBM10P98175 930 aaKnown RBP16.44■□□□□ 0.22
PCCA-215ENST00000637657 SHROOM2Q13796 1616 aa16.44■□□□□ 0.22
PCCA-215ENST00000637657 RTEL1-TNFRSF6BF6WH68 1400 aa16.44■□□□□ 0.22
PCCA-215ENST00000637657 CCDC141Q6ZP82 1450 aa16.44■□□□□ 0.22
PCCA-215ENST00000637657 RNF17Q9BXT8 1623 aaKnown RBP16.43■□□□□ 0.22
PCCA-215ENST00000637657 GOLGA6L22H0YM25 854 aa16.43■□□□□ 0.22
PCCA-215ENST00000637657 PPP2R1AP30153 589 aa16.43■□□□□ 0.22
PCCA-215ENST00000637657 ASXL1Q8IXJ9 1541 aa16.43■□□□□ 0.22
PCCA-215ENST00000637657 ZNF500O60304 480 aaPredicted RBP16.43■□□□□ 0.22
PCCA-215ENST00000637657 CANXP27824 592 aaKnown RBP16.43■□□□□ 0.22
PCCA-215ENST00000637657 DDIT3P35638 169 aa16.43■□□□□ 0.22
PCCA-215ENST00000637657 CDCA8Q53HL2 280 aa16.43■□□□□ 0.22
PCCA-215ENST00000637657 TESK2Q96S53 571 aa16.43■□□□□ 0.22
PCCA-215ENST00000637657 SMC5Q8IY18 1101 aa16.42■□□□□ 0.22
PCCA-215ENST00000637657 KNSTRNQ9Y448 316 aa16.42■□□□□ 0.22
PCCA-215ENST00000637657 DISP3Q9P2K9 1392 aa16.42■□□□□ 0.22
PCCA-215ENST00000637657 NASPP49321 788 aaPredicted RBP16.41■□□□□ 0.22
PCCA-215ENST00000637657 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
PCCA-215ENST00000637657 CFDP1Q9UEE9 299 aaPredicted RBP16.41■□□□□ 0.22
PCCA-215ENST00000637657 GPATCH8Q9UKJ3 1502 aaKnown RBP16.41■□□□□ 0.22
PCCA-215ENST00000637657 ARHGAP31Q2M1Z3 1444 aa16.41■□□□□ 0.22
PCCA-215ENST00000637657 NUP153P49790 1475 aaKnown RBP16.4■□□□□ 0.22
PCCA-215ENST00000637657 ZNF644Q9H582 1327 aaPredicted RBP16.4■□□□□ 0.22
PCCA-215ENST00000637657 KDM2AQ9Y2K7 1162 aa16.4■□□□□ 0.22
PCCA-215ENST00000637657 FAM135AQ9P2D6 1515 aa16.39■□□□□ 0.21
PCCA-215ENST00000637657 PBRM1Q86U86 1689 aa16.39■□□□□ 0.21
PCCA-215ENST00000637657 PLEKHG5O94827 1062 aa16.39■□□□□ 0.21
PCCA-215ENST00000637657 RIPK4P57078 832 aa16.39■□□□□ 0.21
PCCA-215ENST00000637657 CLEC17AQ6ZS10 378 aa16.39■□□□□ 0.21
PCCA-215ENST00000637657 WDR7Q9Y4E6 1490 aa16.38■□□□□ 0.21
PCCA-215ENST00000637657 KIAA0556O60303 1618 aa16.38■□□□□ 0.21
PCCA-215ENST00000637657 MYO5CQ9NQX4 1742 aa16.38■□□□□ 0.21
PCCA-215ENST00000637657 BCAR3O75815 825 aa16.38■□□□□ 0.21
PCCA-215ENST00000637657 RAB3GAP1Q15042 981 aa16.38■□□□□ 0.21
PCCA-215ENST00000637657 CDC42BPAQ5VT25 1732 aa16.38■□□□□ 0.21
PCCA-215ENST00000637657 TNNT2P45379 298 aaPredicted RBP16.37■□□□□ 0.21
PCCA-215ENST00000637657 NOL7Q9UMY1 257 aaKnown RBP16.37■□□□□ 0.21
PCCA-215ENST00000637657 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
PCCA-215ENST00000637657 C9orf84Q5VXU9 1444 aa16.37■□□□□ 0.21
PCCA-215ENST00000637657 PDZRN3Q9UPQ7 1066 aa16.37■□□□□ 0.21
PCCA-215ENST00000637657 RBM25P49756 843 aaKnown RBP16.36■□□□□ 0.21
PCCA-215ENST00000637657 FGD1P98174 961 aa16.36■□□□□ 0.21
PCCA-215ENST00000637657 ARHGEF5Q12774 1597 aa16.36■□□□□ 0.21
PCCA-215ENST00000637657 KLHL40Q2TBA0 621 aa16.36■□□□□ 0.21
PCCA-215ENST00000637657 ADAMTS12P58397 1594 aa16.35■□□□□ 0.21
PCCA-215ENST00000637657 TNPO1Q92973 898 aaKnown RBP16.35■□□□□ 0.21
PCCA-215ENST00000637657 COG6Q9Y2V7 657 aa16.34■□□□□ 0.21
PCCA-215ENST00000637657 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
PCCA-215ENST00000637657 URB2Q14146 1524 aaKnown RBP16.34■□□□□ 0.21
PCCA-215ENST00000637657 GAS2L3Q86XJ1 694 aa16.34■□□□□ 0.21
PCCA-215ENST00000637657 A2MP01023 1474 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms