RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 MS4A4AQ96JQ5 239 aa4.8□□□□□ -1.64
CHRNA4-220ENST00000637628 CLEC11AQ9Y240 323 aa4.8□□□□□ -1.64
CHRNA4-220ENST00000637628 PPME1Q9Y570 386 aa4.8□□□□□ -1.64
CHRNA4-220ENST00000637628 TPD52L2O43399 206 aaKnown RBP4.79□□□□□ -1.64
CHRNA4-220ENST00000637628 VAMP1P23763 118 aa4.79□□□□□ -1.64
CHRNA4-220ENST00000637628 FOSBP53539 338 aa4.79□□□□□ -1.64
CHRNA4-220ENST00000637628 WASHC4Q2M389 1173 aa4.79□□□□□ -1.64
CHRNA4-220ENST00000637628 GORABQ5T7V8 394 aa4.79□□□□□ -1.64
CHRNA4-220ENST00000637628 ZNF662Q6ZS27 426 aa4.79□□□□□ -1.64
CHRNA4-220ENST00000637628 TBC1D2Q9BYX2 928 aa4.79□□□□□ -1.64
CHRNA4-220ENST00000637628 GPHNQ9NQX3 736 aaPredicted RBP4.79□□□□□ -1.64
CHRNA4-220ENST00000637628 TMA7Q9Y2S6 64 aaKnown RBP4.79□□□□□ -1.64
CHRNA4-220ENST00000637628 SOCS7O14512 581 aa4.78□□□□□ -1.64
CHRNA4-220ENST00000637628 RAB11FIP3O75154 756 aa4.78□□□□□ -1.64
CHRNA4-220ENST00000637628 ERCC5P28715 1186 aaPredicted RBP4.78□□□□□ -1.64
CHRNA4-220ENST00000637628 MARSP56192 900 aaKnown RBP4.78□□□□□ -1.64
CHRNA4-220ENST00000637628 PTGDRQ13258 359 aa4.78□□□□□ -1.64
CHRNA4-220ENST00000637628 FBXO31Q5XUX0 539 aaPredicted RBP4.78□□□□□ -1.64
CHRNA4-220ENST00000637628 PPP2R2DQ66LE6 453 aa4.78□□□□□ -1.64
CHRNA4-220ENST00000637628 EXOC8Q8IYI6 725 aa4.78□□□□□ -1.64
CHRNA4-220ENST00000637628 BCL11AQ9H165 835 aa4.78□□□□□ -1.64
CHRNA4-220ENST00000637628 FAM217BQ9NTX9 383 aaPredicted RBP4.78□□□□□ -1.64
CHRNA4-220ENST00000637628 RBM27Q9P2N5 1060 aaKnown RBP4.78□□□□□ -1.64
CHRNA4-220ENST00000637628 TFIP11Q9UBB9 837 aaKnown RBP4.78□□□□□ -1.64
CHRNA4-220ENST00000637628 BIN2Q9UBW5 565 aaPredicted RBP4.78□□□□□ -1.64
CHRNA4-220ENST00000637628 AP1G2O75843 785 aa4.77□□□□□ -1.65
CHRNA4-220ENST00000637628 ARID4AP29374 1257 aaPredicted RBP4.77□□□□□ -1.65
CHRNA4-220ENST00000637628 NOM1Q5C9Z4 860 aaKnown RBP4.77□□□□□ -1.65
CHRNA4-220ENST00000637628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.77□□□□□ -1.65
CHRNA4-220ENST00000637628 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.77□□□□□ -1.65
CHRNA4-220ENST00000637628 NDUFB9Q9Y6M9 179 aa4.77□□□□□ -1.65
CHRNA4-220ENST00000637628 ANKRD33BA6NCL7 494 aa4.76□□□□□ -1.65
CHRNA4-220ENST00000637628 SOWAHDA6NJG2 315 aa4.76□□□□□ -1.65
CHRNA4-220ENST00000637628 RECKO95980 971 aa4.76□□□□□ -1.65
CHRNA4-220ENST00000637628 MAP3K9P80192 1104 aa4.76□□□□□ -1.65
CHRNA4-220ENST00000637628 DIXDC1Q155Q3 683 aa4.76□□□□□ -1.65
CHRNA4-220ENST00000637628 TSNAXIP1Q2TAA8 658 aa4.76□□□□□ -1.65
CHRNA4-220ENST00000637628 NOP9Q86U38 636 aaKnown RBP4.76□□□□□ -1.65
CHRNA4-220ENST00000637628 NPAS4Q8IUM7 802 aa4.76□□□□□ -1.65
CHRNA4-220ENST00000637628 DDX12PQ92771 950 aa4.76□□□□□ -1.65
CHRNA4-220ENST00000637628 DNAJC2Q99543 621 aaKnown RBP4.76□□□□□ -1.65
CHRNA4-220ENST00000637628 LIMD1Q9UGP4 676 aa4.76□□□□□ -1.65
CHRNA4-220ENST00000637628 SUGT1Q9Y2Z0 365 aa4.76□□□□□ -1.65
CHRNA4-220ENST00000637628 DSG3P32926 999 aa4.75□□□□□ -1.65
CHRNA4-220ENST00000637628 VAC14Q08AM6 782 aa4.75□□□□□ -1.65
CHRNA4-220ENST00000637628 DSG2Q14126 1118 aa4.75□□□□□ -1.65
CHRNA4-220ENST00000637628 RBM46Q8TBY0 533 aaKnown RBP4.75□□□□□ -1.65
CHRNA4-220ENST00000637628 METTL14Q9HCE5 456 aaKnown RBP4.75□□□□□ -1.65
CHRNA4-220ENST00000637628 hCG_2014768A0A024R1R8 64 aa4.74□□□□□ -1.65
CHRNA4-220ENST00000637628 A0A0U1RQG5 324 aaPredicted RBP4.74□□□□□ -1.65
CHRNA4-220ENST00000637628 USP17L8P0C7I0 530 aa4.74□□□□□ -1.65
CHRNA4-220ENST00000637628 IGBP1P78318 339 aa4.74□□□□□ -1.65
CHRNA4-220ENST00000637628 CSPP1Q1MSJ5 1256 aa4.74□□□□□ -1.65
CHRNA4-220ENST00000637628 TMEM164Q5U3C3 297 aa4.74□□□□□ -1.65
CHRNA4-220ENST00000637628 RIC3Q7Z5B4 369 aa4.74□□□□□ -1.65
CHRNA4-220ENST00000637628 ZNF710Q8N1W2 664 aa4.74□□□□□ -1.65
CHRNA4-220ENST00000637628 PHOX2BQ99453 314 aa4.74□□□□□ -1.65
CHRNA4-220ENST00000637628 TANGO6Q9C0B7 1094 aa4.74□□□□□ -1.65
CHRNA4-220ENST00000637628 LNPKQ9C0E8 428 aa4.74□□□□□ -1.65
CHRNA4-220ENST00000637628 MAFBQ9Y5Q3 323 aaPredicted RBP4.74□□□□□ -1.65
CHRNA4-220ENST00000637628 GOLGA2Q08379 1002 aa4.73□□□□□ -1.65
CHRNA4-220ENST00000637628 CCDC181Q5TID7 509 aa4.73□□□□□ -1.65
CHRNA4-220ENST00000637628 IFNL1Q8IU54 200 aa4.73□□□□□ -1.65
CHRNA4-220ENST00000637628 TEX2Q8IWB9 1127 aa4.73□□□□□ -1.65
CHRNA4-220ENST00000637628 UCN2Q96RP3 112 aa4.73□□□□□ -1.65
CHRNA4-220ENST00000637628 CDCA7Q9BWT1 371 aaPredicted RBP4.73□□□□□ -1.65
CHRNA4-220ENST00000637628 SBNO2Q9Y2G9 1366 aa4.73□□□□□ -1.65
CHRNA4-220ENST00000637628 TLDC2A0PJX2 215 aa4.72□□□□□ -1.65
CHRNA4-220ENST00000637628 IBSPP21815 317 aaPredicted RBP4.72□□□□□ -1.65
CHRNA4-220ENST00000637628 SERPINB4P48594 390 aa4.72□□□□□ -1.65
CHRNA4-220ENST00000637628 HSP90AB4PQ58FF6 505 aa4.72□□□□□ -1.65
CHRNA4-220ENST00000637628 PHLDB3Q6NSJ2 640 aa4.72□□□□□ -1.65
CHRNA4-220ENST00000637628 MORC4Q8TE76 937 aa4.72□□□□□ -1.65
CHRNA4-220ENST00000637628 STK32AQ8WU08 396 aa4.72□□□□□ -1.65
CHRNA4-220ENST00000637628 NLRP7Q8WX94 980 aa4.72□□□□□ -1.65
CHRNA4-220ENST00000637628 RNF39Q9H2S5 420 aa4.72□□□□□ -1.65
CHRNA4-220ENST00000637628 ALG2Q9H553 416 aa4.72□□□□□ -1.65
CHRNA4-220ENST00000637628 SLC52A1Q9NWF4 448 aa4.72□□□□□ -1.65
CHRNA4-220ENST00000637628 CUEDC1Q9NWM3 386 aaPredicted RBP4.72□□□□□ -1.65
CHRNA4-220ENST00000637628 KLHL42Q9P2K6 505 aa4.72□□□□□ -1.65
CHRNA4-220ENST00000637628 TAGLNQ01995 201 aaKnown RBP4.71□□□□□ -1.66
CHRNA4-220ENST00000637628 C1QBPQ07021 282 aaKnown RBP4.71□□□□□ -1.66
CHRNA4-220ENST00000637628 ELOAQ14241 798 aaKnown RBP4.71□□□□□ -1.66
CHRNA4-220ENST00000637628 PTPROQ16827 1216 aa4.71□□□□□ -1.66
CHRNA4-220ENST00000637628 SDE2Q6IQ49 451 aa4.71□□□□□ -1.66
CHRNA4-220ENST00000637628 TMC2Q8TDI7 906 aa4.71□□□□□ -1.66
CHRNA4-220ENST00000637628 VTI1AQ96AJ9 217 aa4.71□□□□□ -1.66
CHRNA4-220ENST00000637628 GPATCH3Q96I76 525 aa4.71□□□□□ -1.66
CHRNA4-220ENST00000637628 ZMIZ1Q9ULJ6 1067 aa4.71□□□□□ -1.66
CHRNA4-220ENST00000637628 SSFA2P28290 1259 aa4.7□□□□□ -1.66
CHRNA4-220ENST00000637628 GTF2F1P35269 517 aaKnown RBP eCLIP4.7□□□□□ -1.66
CHRNA4-220ENST00000637628 PTGER2P43116 358 aa4.7□□□□□ -1.66
CHRNA4-220ENST00000637628 PRIM1P49642 420 aaKnown RBP4.7□□□□□ -1.66
CHRNA4-220ENST00000637628 ANAPC15P60006 121 aa4.7□□□□□ -1.66
CHRNA4-220ENST00000637628 SETQ01105 290 aaPredicted RBP4.7□□□□□ -1.66
CHRNA4-220ENST00000637628 SEMA3FQ13275 785 aa4.7□□□□□ -1.66
CHRNA4-220ENST00000637628 C9orf131Q5VYM1 1079 aa4.7□□□□□ -1.66
CHRNA4-220ENST00000637628 PIK3R5Q8WYR1 880 aa4.7□□□□□ -1.66
CHRNA4-220ENST00000637628 DHX38Q92620 1227 aaKnown RBP4.7□□□□□ -1.66
CHRNA4-220ENST00000637628 L3MBTL3Q96JM7 780 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms