RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	MARS	P56192	900 aa	Known RBP	3.64	□□□□□ -1.83
GABRB3-223	ENST00000637293	PTGDR	Q13258	359 aa		3.64	□□□□□ -1.83
GABRB3-223	ENST00000637293	CCDC181	Q5TID7	509 aa		3.64	□□□□□ -1.83
GABRB3-223	ENST00000637293	ZNF526	Q8TF50	670 aa	Predicted RBP	3.64	□□□□□ -1.83
GABRB3-223	ENST00000637293	TBC1D2B	Q9UPU7	963 aa		3.64	□□□□□ -1.83
GABRB3-223	ENST00000637293	RIPOR2	Q9Y4F9	1068 aa		3.64	□□□□□ -1.83
GABRB3-223	ENST00000637293	NDUFB9	Q9Y6M9	179 aa		3.64	□□□□□ -1.83
GABRB3-223	ENST00000637293	LOC102724159	A0A0B4J2E5	919 aa		3.63	□□□□□ -1.83
GABRB3-223	ENST00000637293	SOX11	P35716	441 aa		3.63	□□□□□ -1.83
GABRB3-223	ENST00000637293	MAP3K9	P80192	1104 aa		3.63	□□□□□ -1.83
GABRB3-223	ENST00000637293	GOLGA2	Q08379	1002 aa		3.63	□□□□□ -1.83
GABRB3-223	ENST00000637293	PWP2	Q15269	919 aa	Known RBP	3.63	□□□□□ -1.83
GABRB3-223	ENST00000637293	TUSC1	Q2TAM9	212 aa		3.63	□□□□□ -1.83
GABRB3-223	ENST00000637293	EXOC8	Q8IYI6	725 aa		3.63	□□□□□ -1.83
GABRB3-223	ENST00000637293	TSPYL2	Q9H2G4	693 aa	Predicted RBP	3.63	□□□□□ -1.83
GABRB3-223	ENST00000637293	FAM217B	Q9NTX9	383 aa	Predicted RBP	3.63	□□□□□ -1.83
GABRB3-223	ENST00000637293	BRPF3	Q9ULD4	1205 aa		3.63	□□□□□ -1.83
GABRB3-223	ENST00000637293	IBSP	P21815	317 aa	Predicted RBP	3.62	□□□□□ -1.83
GABRB3-223	ENST00000637293	PTGER2	P43116	358 aa		3.62	□□□□□ -1.83
GABRB3-223	ENST00000637293	ELOA	Q14241	798 aa	Known RBP	3.62	□□□□□ -1.83
GABRB3-223	ENST00000637293	GIMAP6	Q6P9H5	292 aa		3.62	□□□□□ -1.83
GABRB3-223	ENST00000637293	DPH6	Q7L8W6	267 aa		3.62	□□□□□ -1.83
GABRB3-223	ENST00000637293	MICAL1	Q8TDZ2	1067 aa		3.62	□□□□□ -1.83
GABRB3-223	ENST00000637293	TBC1D2	Q9BYX2	928 aa		3.62	□□□□□ -1.83
GABRB3-223	ENST00000637293	RNF39	Q9H2S5	420 aa		3.62	□□□□□ -1.83
GABRB3-223	ENST00000637293	CUEDC1	Q9NWM3	386 aa	Predicted RBP	3.62	□□□□□ -1.83
GABRB3-223	ENST00000637293	CLEC11A	Q9Y240	323 aa		3.62	□□□□□ -1.83
GABRB3-223	ENST00000637293	PPME1	Q9Y570	386 aa		3.62	□□□□□ -1.83
GABRB3-223	ENST00000637293	TPD52L2	O43399	206 aa	Known RBP	3.61	□□□□□ -1.83
GABRB3-223	ENST00000637293	ERCC5	P28715	1186 aa	Predicted RBP	3.61	□□□□□ -1.83
GABRB3-223	ENST00000637293	DSG3	P32926	999 aa		3.61	□□□□□ -1.83
GABRB3-223	ENST00000637293	ITGAE	P38570	1179 aa		3.61	□□□□□ -1.83
GABRB3-223	ENST00000637293	IGBP1	P78318	339 aa		3.61	□□□□□ -1.83
GABRB3-223	ENST00000637293	SET	Q01105	290 aa	Predicted RBP	3.61	□□□□□ -1.83
GABRB3-223	ENST00000637293	ADAMTS19	Q8TE59	1207 aa		3.61	□□□□□ -1.83
GABRB3-223	ENST00000637293	MS4A4A	Q96JQ5	239 aa		3.61	□□□□□ -1.83
GABRB3-223	ENST00000637293	TFIP11	Q9UBB9	837 aa	Known RBP	3.61	□□□□□ -1.83
GABRB3-223	ENST00000637293	MAGEC2	Q9UBF1	373 aa	Predicted RBP	3.61	□□□□□ -1.83
GABRB3-223	ENST00000637293	ANKRD33B	A6NCL7	494 aa		3.6	□□□□□ -1.83
GABRB3-223	ENST00000637293	SOWAHD	A6NJG2	315 aa		3.6	□□□□□ -1.83
GABRB3-223	ENST00000637293	AP1G2	O75843	785 aa		3.6	□□□□□ -1.83
GABRB3-223	ENST00000637293	OAT	P04181	439 aa		3.6	□□□□□ -1.83
GABRB3-223	ENST00000637293	FOXK1	P85037	733 aa		3.6	□□□□□ -1.83
GABRB3-223	ENST00000637293	DSG2	Q14126	1118 aa		3.6	□□□□□ -1.83
GABRB3-223	ENST00000637293	RIC3	Q7Z5B4	369 aa		3.6	□□□□□ -1.83
GABRB3-223	ENST00000637293	ZNF710	Q8N1W2	664 aa		3.6	□□□□□ -1.83
GABRB3-223	ENST00000637293	TMC2	Q8TDI7	906 aa		3.6	□□□□□ -1.83
GABRB3-223	ENST00000637293	ALG2	Q9H553	416 aa		3.6	□□□□□ -1.83
GABRB3-223	ENST00000637293	PRDM16	Q9HAZ2	1276 aa		3.6	□□□□□ -1.83
GABRB3-223	ENST00000637293	RBM27	Q9P2N5	1060 aa	Known RBP	3.6	□□□□□ -1.83
GABRB3-223	ENST00000637293	BIN2	Q9UBW5	565 aa	Predicted RBP	3.6	□□□□□ -1.83
GABRB3-223	ENST00000637293	hCG_2014768	A0A024R1R8	64 aa		3.59	□□□□□ -1.83
GABRB3-223	ENST00000637293	TLDC2	A0PJX2	215 aa		3.59	□□□□□ -1.83
GABRB3-223	ENST00000637293	RAB11FIP3	O75154	756 aa		3.59	□□□□□ -1.83
GABRB3-223	ENST00000637293	CDCA8	Q53HL2	280 aa		3.59	□□□□□ -1.83
GABRB3-223	ENST00000637293	PPARGC1B	Q86YN6	1023 aa	Known RBP	3.59	□□□□□ -1.83
GABRB3-223	ENST00000637293	NPAS4	Q8IUM7	802 aa		3.59	□□□□□ -1.83
GABRB3-223	ENST00000637293	ZCRB1	Q8TBF4	217 aa	Known RBP	3.59	□□□□□ -1.83
GABRB3-223	ENST00000637293	MORC4	Q8TE76	937 aa		3.59	□□□□□ -1.83
GABRB3-223	ENST00000637293	ARMC5	Q96C12	935 aa		3.59	□□□□□ -1.83
GABRB3-223	ENST00000637293	L3MBTL3	Q96JM7	780 aa	Predicted RBP	3.59	□□□□□ -1.83
GABRB3-223	ENST00000637293	TANGO6	Q9C0B7	1094 aa		3.59	□□□□□ -1.83
GABRB3-223	ENST00000637293	MAFB	Q9Y5Q3	323 aa	Predicted RBP	3.59	□□□□□ -1.83
GABRB3-223	ENST00000637293	SCAMP3	O14828	347 aa	Known RBP	3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	LZTS3	O60299	673 aa	Predicted RBP	3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	USP17L8	P0C7I0	530 aa		3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	GJA5	P36382	358 aa		3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	MCCD1	P59942	119 aa	Predicted RBP	3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	ANAPC15	P60006	121 aa		3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	SEMA3F	Q13275	785 aa		3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	COL19A1	Q14993	1142 aa		3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	TSNAXIP1	Q2TAA8	658 aa		3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	HSP90AB4P	Q58FF6	505 aa		3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	SOGA3	Q5TF21	947 aa		3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	IFNL1	Q8IU54	200 aa		3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	PNMA1	Q8ND90	353 aa		3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	RBM46	Q8TBY0	533 aa	Known RBP	3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	DDX12P	Q92771	950 aa		3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	PCGF6	Q9BYE7	350 aa		3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	LIMD1	Q9UGP4	676 aa		3.58	□□□□□ -1.84
GABRB3-223	ENST00000637293	SPTLC1	O15269	473 aa		3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	ATP9B	O43861	1147 aa		3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	RECK	O95980	971 aa		3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	ATP2B1	P20020	1258 aa		3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	SSFA2	P28290	1259 aa		3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	GNL2	Q13823	731 aa	Known RBP	3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	PTPRO	Q16827	1216 aa		3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	HSP90AB2P	Q58FF8	381 aa		3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	TMED8	Q6PL24	325 aa	Predicted RBP	3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	ZNF662	Q6ZS27	426 aa		3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	BRINP2	Q9C0B6	783 aa		3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	NLRP2	Q9NX02	1062 aa		3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	SBNO2	Q9Y2G9	1366 aa		3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	SUGT1	Q9Y2Z0	365 aa		3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	CCDC61	Q9Y6R9	512 aa		3.57	□□□□□ -1.84
GABRB3-223	ENST00000637293	NUTM2B	A6NNL0	878 aa	Predicted RBP	3.56	□□□□□ -1.84
GABRB3-223	ENST00000637293	NUTM2E	B1AL46	878 aa	Predicted RBP	3.56	□□□□□ -1.84
GABRB3-223	ENST00000637293	MAFG	O15525	162 aa		3.56	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms