RNA–Protein interactions for RNA: ENST00000637194.1

SYNGAP1-220, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-220ENST00000637194 LAPTM4AQ15012 233 aa4.27□□□□□ -1.73
SYNGAP1-220ENST00000637194 KMT5BQ4FZB7 885 aa4.27□□□□□ -1.73
SYNGAP1-220ENST00000637194 PPP1R18Q6NYC8 613 aa4.27□□□□□ -1.73
SYNGAP1-220ENST00000637194 PXYLP1Q8TE99 480 aa4.27□□□□□ -1.73
SYNGAP1-220ENST00000637194 TMUB1Q9BVT8 246 aa4.27□□□□□ -1.73
SYNGAP1-220ENST00000637194 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.27□□□□□ -1.73
SYNGAP1-220ENST00000637194 PCDHB3Q9Y5E6 796 aa4.27□□□□□ -1.73
SYNGAP1-220ENST00000637194 V9GY48 417 aaPredicted RBP4.27□□□□□ -1.73
SYNGAP1-220ENST00000637194 GNPATO15228 680 aa4.26□□□□□ -1.73
SYNGAP1-220ENST00000637194 GPR37O15354 613 aa4.26□□□□□ -1.73
SYNGAP1-220ENST00000637194 ACTN4O43707 911 aaKnown RBP4.26□□□□□ -1.73
SYNGAP1-220ENST00000637194 ZPR1O75312 459 aa4.26□□□□□ -1.73
SYNGAP1-220ENST00000637194 RBM26Q5T8P6 1007 aaKnown RBP4.26□□□□□ -1.73
SYNGAP1-220ENST00000637194 CFHP08603 1231 aa4.25□□□□□ -1.73
SYNGAP1-220ENST00000637194 COPS2P61201 443 aa4.25□□□□□ -1.73
SYNGAP1-220ENST00000637194 FAM161AQ3B820 660 aa4.25□□□□□ -1.73
SYNGAP1-220ENST00000637194 RSPH4AQ5TD94 716 aa4.25□□□□□ -1.73
SYNGAP1-220ENST00000637194 METTL3Q86U44 580 aaKnown RBP4.25□□□□□ -1.73
SYNGAP1-220ENST00000637194 VSIG10Q8N0Z9 540 aa4.25□□□□□ -1.73
SYNGAP1-220ENST00000637194 PRKD2Q9BZL6 878 aa4.25□□□□□ -1.73
SYNGAP1-220ENST00000637194 KDM2AQ9Y2K7 1162 aa4.25□□□□□ -1.73
SYNGAP1-220ENST00000637194 SLC10A3P09131 477 aa4.24□□□□□ -1.73
SYNGAP1-220ENST00000637194 BLOC1S3Q6QNY0 202 aa4.24□□□□□ -1.73
SYNGAP1-220ENST00000637194 NKX2-3Q8TAU0 364 aa4.24□□□□□ -1.73
SYNGAP1-220ENST00000637194 NR1I2O75469 434 aa4.23□□□□□ -1.73
SYNGAP1-220ENST00000637194 DAXXQ9UER7 740 aaPredicted RBP4.23□□□□□ -1.73
SYNGAP1-220ENST00000637194 FECHP22830 423 aa4.22□□□□□ -1.73
SYNGAP1-220ENST00000637194 GPIHBP1Q8IV16 184 aa4.22□□□□□ -1.73
SYNGAP1-220ENST00000637194 TULP1O00294 542 aaPredicted RBP4.21□□□□□ -1.74
SYNGAP1-220ENST00000637194 NRG2O14511 850 aaPredicted RBP4.21□□□□□ -1.74
SYNGAP1-220ENST00000637194 GFRA3O60609 400 aa4.21□□□□□ -1.74
SYNGAP1-220ENST00000637194 ADH1BP00325 375 aa4.21□□□□□ -1.74
SYNGAP1-220ENST00000637194 Q6ZNB5 142 aa4.21□□□□□ -1.74
SYNGAP1-220ENST00000637194 ANKLE1Q8NAG6 615 aa4.21□□□□□ -1.74
SYNGAP1-220ENST00000637194 RNF223E7ERA6 249 aa4.2□□□□□ -1.74
SYNGAP1-220ENST00000637194 TLL1O43897 1013 aa4.2□□□□□ -1.74
SYNGAP1-220ENST00000637194 SULF1Q8IWU6 871 aa4.2□□□□□ -1.74
SYNGAP1-220ENST00000637194 SCUBE3Q8IX30 993 aa4.2□□□□□ -1.74
SYNGAP1-220ENST00000637194 RDH13Q8NBN7 331 aa4.19□□□□□ -1.74
SYNGAP1-220ENST00000637194 SLC6A16Q9GZN6 736 aa4.19□□□□□ -1.74
SYNGAP1-220ENST00000637194 S1PR4O95977 384 aa4.18□□□□□ -1.74
SYNGAP1-220ENST00000637194 ATP6V1AP38606 617 aa4.18□□□□□ -1.74
SYNGAP1-220ENST00000637194 SLC19A1P41440 591 aa4.18□□□□□ -1.74
SYNGAP1-220ENST00000637194 GCGRP47871 477 aa4.18□□□□□ -1.74
SYNGAP1-220ENST00000637194 MAP2K5Q13163 448 aa4.18□□□□□ -1.74
SYNGAP1-220ENST00000637194 TRAF7Q6Q0C0 670 aa4.18□□□□□ -1.74
SYNGAP1-220ENST00000637194 EMID1Q96A84 441 aaPredicted RBP4.18□□□□□ -1.74
SYNGAP1-220ENST00000637194 PHOX2BQ99453 314 aa4.18□□□□□ -1.74
SYNGAP1-220ENST00000637194 PDZRN3Q9UPQ7 1066 aa4.18□□□□□ -1.74
SYNGAP1-220ENST00000637194 SALL2Q9Y467 1007 aaPredicted RBP4.18□□□□□ -1.74
SYNGAP1-220ENST00000637194 DDX11L8A8MPP1 907 aa4.17□□□□□ -1.74
SYNGAP1-220ENST00000637194 MORN1Q5T089 497 aa4.17□□□□□ -1.74
SYNGAP1-220ENST00000637194 SPRYD7Q5W111 196 aa4.17□□□□□ -1.74
SYNGAP1-220ENST00000637194 ZNF598Q86UK7 904 aaKnown RBP4.17□□□□□ -1.74
SYNGAP1-220ENST00000637194 SPSB2Q99619 263 aa4.17□□□□□ -1.74
SYNGAP1-220ENST00000637194 MINK1Q8N4C8 1332 aaPredicted RBP4.17□□□□□ -1.74
SYNGAP1-220ENST00000637194 LCE2BO14633 110 aa4.16□□□□□ -1.74
SYNGAP1-220ENST00000637194 IRF6O14896 467 aa4.16□□□□□ -1.74
SYNGAP1-220ENST00000637194 PRR20EP86478 221 aa4.16□□□□□ -1.74
SYNGAP1-220ENST00000637194 PRR20CP86479 221 aa4.16□□□□□ -1.74
SYNGAP1-220ENST00000637194 PRR20DP86480 221 aa4.16□□□□□ -1.74
SYNGAP1-220ENST00000637194 PRR20BP86481 221 aa4.16□□□□□ -1.74
SYNGAP1-220ENST00000637194 PRR20AP86496 221 aa4.16□□□□□ -1.74
SYNGAP1-220ENST00000637194 FUT2Q10981 343 aa4.16□□□□□ -1.74
SYNGAP1-220ENST00000637194 PUS10Q3MIT2 529 aaKnown RBP4.16□□□□□ -1.74
SYNGAP1-220ENST00000637194 GRIPAP1Q4V328 841 aa4.16□□□□□ -1.74
SYNGAP1-220ENST00000637194 THAP11Q96EK4 314 aa4.16□□□□□ -1.74
SYNGAP1-220ENST00000637194 PPEF1O14829 653 aaPredicted RBP4.15□□□□□ -1.75
SYNGAP1-220ENST00000637194 FMNL1O95466 1100 aaPredicted RBP4.15□□□□□ -1.75
SYNGAP1-220ENST00000637194 CD46P15529 392 aa4.15□□□□□ -1.75
SYNGAP1-220ENST00000637194 RPIAP49247 311 aa4.15□□□□□ -1.75
SYNGAP1-220ENST00000637194 LMOD2Q6P5Q4 547 aa4.15□□□□□ -1.75
SYNGAP1-220ENST00000637194 LIAT1Q6ZQX7 453 aa4.15□□□□□ -1.75
SYNGAP1-220ENST00000637194 TRIM67Q6ZTA4 783 aa4.15□□□□□ -1.75
SYNGAP1-220ENST00000637194 NLRP7Q8WX94 980 aa4.15□□□□□ -1.75
SYNGAP1-220ENST00000637194 MSS51Q4VC12 460 aa4.14□□□□□ -1.75
SYNGAP1-220ENST00000637194 PLA2G2CQ5R387 149 aa4.14□□□□□ -1.75
SYNGAP1-220ENST00000637194 ZNF697Q5TEC3 545 aa4.14□□□□□ -1.75
SYNGAP1-220ENST00000637194 BRICD5Q6PL45 260 aa4.14□□□□□ -1.75
SYNGAP1-220ENST00000637194 SLC27A5Q9Y2P5 690 aa4.14□□□□□ -1.75
SYNGAP1-220ENST00000637194 GDF9O60383 454 aa4.13□□□□□ -1.75
SYNGAP1-220ENST00000637194 DGAT1O75907 488 aa4.13□□□□□ -1.75
SYNGAP1-220ENST00000637194 USP46P62068 366 aa4.13□□□□□ -1.75
SYNGAP1-220ENST00000637194 Q3C1V9 767 aa4.13□□□□□ -1.75
SYNGAP1-220ENST00000637194 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.13□□□□□ -1.75
SYNGAP1-220ENST00000637194 FAM160A2Q8N612 972 aaPredicted RBP4.13□□□□□ -1.75
SYNGAP1-220ENST00000637194 CCDC102AQ96A19 550 aa4.13□□□□□ -1.75
SYNGAP1-220ENST00000637194 KDM4AO75164 1064 aa4.12□□□□□ -1.75
SYNGAP1-220ENST00000637194 CLCN1P35523 988 aa4.12□□□□□ -1.75
SYNGAP1-220ENST00000637194 MDM2Q00987 491 aaPredicted RBP4.12□□□□□ -1.75
SYNGAP1-220ENST00000637194 CD2BP2O95400 341 aaKnown RBP4.11□□□□□ -1.75
SYNGAP1-220ENST00000637194 MMP16P51512 607 aa4.11□□□□□ -1.75
SYNGAP1-220ENST00000637194 PKDCCQ504Y2 493 aa4.11□□□□□ -1.75
SYNGAP1-220ENST00000637194 RNF19BQ6ZMZ0 732 aa4.11□□□□□ -1.75
SYNGAP1-220ENST00000637194 GPCPD1Q9NPB8 672 aa4.11□□□□□ -1.75
SYNGAP1-220ENST00000637194 FCF1Q9Y324 198 aaKnown RBP4.11□□□□□ -1.75
SYNGAP1-220ENST00000637194 BARGINQ6ZT62 677 aa4.1□□□□□ -1.75
SYNGAP1-220ENST00000637194 FAM217BQ9NTX9 383 aaPredicted RBP4.1□□□□□ -1.75
SYNGAP1-220ENST00000637194 PKD2L1Q9P0L9 805 aa4.1□□□□□ -1.75
SYNGAP1-220ENST00000637194 ZBTB24O43167 697 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms