RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 GPRASP1Q5JY77 1395 aa29.72■■■□□ 2.35
CLN8-213ENST00000637156 NRXN1Q9ULB1 1477 aa29.71■■■□□ 2.35
CLN8-213ENST00000637156 IFT172Q9UG01 1749 aa29.7■■■□□ 2.35
CLN8-213ENST00000637156 CFAP70Q5T0N1 1121 aa29.7■■■□□ 2.35
CLN8-213ENST00000637156 C3P01024 1663 aa29.7■■■□□ 2.35
CLN8-213ENST00000637156 USP47Q96K76 1375 aa29.7■■■□□ 2.34
CLN8-213ENST00000637156 DIEXFQ68CQ4 756 aaKnown RBP29.7■■■□□ 2.34
CLN8-213ENST00000637156 A2ML1A8K2U0 1454 aa29.69■■■□□ 2.34
CLN8-213ENST00000637156 NEXMIFQ5QGS0 1516 aa29.68■■■□□ 2.34
CLN8-213ENST00000637156 ADAMTSL3P82987 1691 aa29.67■■■□□ 2.34
CLN8-213ENST00000637156 PPLO60437 1756 aa29.67■■■□□ 2.34
CLN8-213ENST00000637156 MYO5BQ9ULV0 1848 aa29.64■■■□□ 2.34
CLN8-213ENST00000637156 ZFYVE9O95405 1425 aa29.64■■■□□ 2.34
CLN8-213ENST00000637156 C14orf93Q9H972 538 aaKnown RBP29.64■■■□□ 2.34
CLN8-213ENST00000637156 PIK3C2GO75747 1445 aa29.63■■■□□ 2.33
CLN8-213ENST00000637156 ST20-MTHFSA0A0A6YYL1 179 aa29.62■■■□□ 2.33
CLN8-213ENST00000637156 C11orf95C9JLR9 678 aaPredicted RBP29.61■■■□□ 2.33
CLN8-213ENST00000637156 NLRP1Q9C000 1473 aa29.6■■■□□ 2.33
CLN8-213ENST00000637156 RIMS1Q86UR5 1692 aaKnown RBP29.59■■■□□ 2.33
CLN8-213ENST00000637156 RIMS2Q9UQ26 1411 aa29.56■■■□□ 2.32
CLN8-213ENST00000637156 WASHC2AQ641Q2 1341 aa29.55■■■□□ 2.32
CLN8-213ENST00000637156 SENP3Q9H4L4 574 aaPredicted RBP29.55■■■□□ 2.32
CLN8-213ENST00000637156 LAMC1P11047 1609 aa29.54■■■□□ 2.32
CLN8-213ENST00000637156 KIAA1210Q9ULL0 1709 aa29.54■■■□□ 2.32
CLN8-213ENST00000637156 DDX10Q13206 875 aaKnown RBP29.53■■■□□ 2.32
CLN8-213ENST00000637156 TMEM132EQ6IEE7 984 aa29.53■■■□□ 2.32
CLN8-213ENST00000637156 TMEM2Q9UHN6 1383 aa29.52■■■□□ 2.32
CLN8-213ENST00000637156 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.51■■■□□ 2.31
CLN8-213ENST00000637156 HDGFP51858 240 aaKnown RBP29.51■■■□□ 2.31
CLN8-213ENST00000637156 UBR1Q8IWV7 1749 aa29.5■■■□□ 2.31
CLN8-213ENST00000637156 KDM5AP29375 1690 aaKnown RBP29.49■■■□□ 2.31
CLN8-213ENST00000637156 SCAF11Q99590 1463 aaKnown RBP29.48■■■□□ 2.31
CLN8-213ENST00000637156 TESK2Q96S53 571 aa29.48■■■□□ 2.31
CLN8-213ENST00000637156 THEMISQ8N1K5 641 aaPredicted RBP29.46■■■□□ 2.31
CLN8-213ENST00000637156 PTPRMP28827 1452 aa29.46■■■□□ 2.31
CLN8-213ENST00000637156 LTKP29376 864 aa29.46■■■□□ 2.31
CLN8-213ENST00000637156 CCDC7Q96M83 1385 aa29.45■■■□□ 2.31
CLN8-213ENST00000637156 KIF7Q2M1P5 1343 aa29.45■■■□□ 2.31
CLN8-213ENST00000637156 ADGRB1O14514 1584 aa29.45■■■□□ 2.3
CLN8-213ENST00000637156 SETBP1Q9Y6X0 1596 aa29.44■■■□□ 2.3
CLN8-213ENST00000637156 TXNDC2Q86VQ3 553 aa29.42■■■□□ 2.3
CLN8-213ENST00000637156 TRAK1Q9UPV9 953 aa29.41■■■□□ 2.3
CLN8-213ENST00000637156 MYO3AQ8NEV4 1616 aa29.4■■■□□ 2.3
CLN8-213ENST00000637156 IQGAP1P46940 1657 aa29.4■■■□□ 2.3
CLN8-213ENST00000637156 ALKQ9UM73 1620 aa29.37■■■□□ 2.29
CLN8-213ENST00000637156 EID1Q9Y6B2 187 aa29.37■■■□□ 2.29
CLN8-213ENST00000637156 ARHGAP23Q9P227 1491 aa29.37■■■□□ 2.29
CLN8-213ENST00000637156 KDM4FA0A1W2PPD8 638 aa29.36■■■□□ 2.29
CLN8-213ENST00000637156 SETD1BQ9UPS6 1966 aaKnown RBP29.36■■■□□ 2.29
CLN8-213ENST00000637156 SLIT1O75093 1534 aa29.36■■■□□ 2.29
CLN8-213ENST00000637156 EIF3AQ14152 1382 aaKnown RBP29.36■■■□□ 2.29
CLN8-213ENST00000637156 CEP170BQ9Y4F5 1589 aaPredicted RBP29.35■■■□□ 2.29
CLN8-213ENST00000637156 STK26Q9P289 416 aa29.33■■■□□ 2.29
CLN8-213ENST00000637156 ASXL1Q8IXJ9 1541 aa29.32■■■□□ 2.28
CLN8-213ENST00000637156 BCANQ96GW7 911 aa29.32■■■□□ 2.28
CLN8-213ENST00000637156 POLR3GLQ9BT43 218 aa29.32■■■□□ 2.28
CLN8-213ENST00000637156 MIER1Q8N108 512 aa29.31■■■□□ 2.28
CLN8-213ENST00000637156 TMF1P82094 1093 aa29.31■■■□□ 2.28
CLN8-213ENST00000637156 DISP3Q9P2K9 1392 aa29.3■■■□□ 2.28
CLN8-213ENST00000637156 PLEKHG1Q9ULL1 1385 aa29.3■■■□□ 2.28
CLN8-213ENST00000637156 NRXN3Q9Y4C0 1643 aa29.29■■■□□ 2.28
CLN8-213ENST00000637156 YTHDC2Q9H6S0 1430 aaKnown RBP29.28■■■□□ 2.28
CLN8-213ENST00000637156 CENPJQ9HC77 1338 aaPredicted RBP29.28■■■□□ 2.28
CLN8-213ENST00000637156 METP08581 1390 aa29.28■■■□□ 2.28
CLN8-213ENST00000637156 ADAMTS13Q76LX8 1427 aa29.27■■■□□ 2.28
CLN8-213ENST00000637156 POLR1AO95602 1720 aaPredicted RBP29.25■■■□□ 2.27
CLN8-213ENST00000637156 SLC24A1O60721 1099 aa29.23■■■□□ 2.27
CLN8-213ENST00000637156 ANKLE2Q86XL3 938 aa29.23■■■□□ 2.27
CLN8-213ENST00000637156 SLC26A8Q96RN1 970 aa29.23■■■□□ 2.27
CLN8-213ENST00000637156 ZNF142P52746 1687 aaPredicted RBP29.22■■■□□ 2.27
CLN8-213ENST00000637156 SETD1AO15047 1707 aaKnown RBP29.22■■■□□ 2.27
CLN8-213ENST00000637156 LRPPRCP42704 1394 aaKnown RBP29.21■■■□□ 2.27
CLN8-213ENST00000637156 SBNO2Q9Y2G9 1366 aa29.21■■■□□ 2.27
CLN8-213ENST00000637156 MED14O60244 1454 aa29.2■■■□□ 2.27
CLN8-213ENST00000637156 ABCC11Q96J66 1382 aa29.2■■■□□ 2.27
CLN8-213ENST00000637156 PRAM1Q96QH2 718 aa29.19■■■□□ 2.26
CLN8-213ENST00000637156 TBX22Q9Y458 520 aa29.19■■■□□ 2.26
CLN8-213ENST00000637156 SAFB2Q14151 953 aaKnown RBP eCLIP29.17■■■□□ 2.26
CLN8-213ENST00000637156 CDCA8Q53HL2 280 aa29.17■■■□□ 2.26
CLN8-213ENST00000637156 POGKQ9P215 609 aa29.15■■■□□ 2.26
CLN8-213ENST00000637156 ARHGEF28Q8N1W1 1705 aaKnown RBP29.15■■■□□ 2.26
CLN8-213ENST00000637156 WAPLQ7Z5K2 1190 aa29.14■■■□□ 2.26
CLN8-213ENST00000637156 SIRT1Q96EB6 747 aa29.11■■■□□ 2.25
CLN8-213ENST00000637156 PLEKHH1Q9ULM0 1364 aa29.09■■■□□ 2.25
CLN8-213ENST00000637156 DLC1Q96QB1 1528 aa29.09■■■□□ 2.25
CLN8-213ENST00000637156 ANP32CO43423 234 aa29.08■■■□□ 2.25
CLN8-213ENST00000637156 QRICH2Q9H0J4 1663 aa29.08■■■□□ 2.25
CLN8-213ENST00000637156 PTPRUQ92729 1446 aa29.08■■■□□ 2.25
CLN8-213ENST00000637156 NCKAP5LQ9HCH0 1330 aa29.07■■■□□ 2.24
CLN8-213ENST00000637156 TECPR2O15040 1411 aa29.07■■■□□ 2.24
CLN8-213ENST00000637156 AMOTL2Q9Y2J4 779 aa29.06■■■□□ 2.24
CLN8-213ENST00000637156 MINK1Q8N4C8 1332 aaPredicted RBP29.06■■■□□ 2.24
CLN8-213ENST00000637156 EVC2Q86UK5 1308 aa29.05■■■□□ 2.24
CLN8-213ENST00000637156 PANK3Q9H999 370 aa29.05■■■□□ 2.24
CLN8-213ENST00000637156 ROBO2Q9HCK4 1378 aa29.03■■■□□ 2.24
CLN8-213ENST00000637156 PER1O15534 1290 aaPredicted RBP29.03■■■□□ 2.24
CLN8-213ENST00000637156 PUS7Q96PZ0 661 aaKnown RBP29.02■■■□□ 2.24
CLN8-213ENST00000637156 FAM135BQ49AJ0 1406 aa29.02■■■□□ 2.24
CLN8-213ENST00000637156 HSPA2P54652 639 aa29■■■□□ 2.23
CLN8-213ENST00000637156 CABP2Q9NPB3 220 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms