RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 RGS3P49796 1198 aa20.15■□□□□ 0.82
CACNA1A-235ENST00000637004 GOLGA2Q08379 1002 aa20.15■□□□□ 0.82
CACNA1A-235ENST00000637004 AFAP1Q8N556 730 aa20.14■□□□□ 0.82
CACNA1A-235ENST00000637004 EFCAB2Q5VUJ9 269 aa20.14■□□□□ 0.81
CACNA1A-235ENST00000637004 TESK2Q96S53 571 aa20.14■□□□□ 0.81
CACNA1A-235ENST00000637004 EIF3AQ14152 1382 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-235ENST00000637004 TMF1P82094 1093 aa20.13■□□□□ 0.81
CACNA1A-235ENST00000637004 WDR43Q15061 677 aaKnown RBP eCLIP20.13■□□□□ 0.81
CACNA1A-235ENST00000637004 CCDC144AA2RUR9 1427 aa20.13■□□□□ 0.81
CACNA1A-235ENST00000637004 DISP3Q9P2K9 1392 aa20.13■□□□□ 0.81
CACNA1A-235ENST00000637004 NBPF1Q3BBV0 1214 aa20.13■□□□□ 0.81
CACNA1A-235ENST00000637004 ARHGAP5Q13017 1502 aa20.13■□□□□ 0.81
CACNA1A-235ENST00000637004 ERBINQ96RT1 1412 aa20.12■□□□□ 0.81
CACNA1A-235ENST00000637004 ZNF521Q96K83 1311 aa20.11■□□□□ 0.81
CACNA1A-235ENST00000637004 LAMC1P11047 1609 aa20.11■□□□□ 0.81
CACNA1A-235ENST00000637004 PLEKHH1Q9ULM0 1364 aa20.11■□□□□ 0.81
CACNA1A-235ENST00000637004 FANCAO15360 1455 aa20.11■□□□□ 0.81
CACNA1A-235ENST00000637004 PLCH2O75038 1416 aa20.11■□□□□ 0.81
CACNA1A-235ENST00000637004 BECN1Q14457 450 aa20.1■□□□□ 0.81
CACNA1A-235ENST00000637004 PRDM15P57071 1507 aaPredicted RBP20.09■□□□□ 0.81
CACNA1A-235ENST00000637004 L1TD1Q5T7N2 865 aaKnown RBP20.08■□□□□ 0.8
CACNA1A-235ENST00000637004 ABCA9Q8IUA7 1624 aa20.08■□□□□ 0.8
CACNA1A-235ENST00000637004 CDC42BPAQ5VT25 1732 aa20.07■□□□□ 0.8
CACNA1A-235ENST00000637004 SLFN5Q08AF3 891 aa20.07■□□□□ 0.8
CACNA1A-235ENST00000637004 FAM135AQ9P2D6 1515 aa20.06■□□□□ 0.8
CACNA1A-235ENST00000637004 RGL3Q3MIN7 710 aa20.06■□□□□ 0.8
CACNA1A-235ENST00000637004 PPP2R1AP30153 589 aa20.05■□□□□ 0.8
CACNA1A-235ENST00000637004 KNSTRNQ9Y448 316 aa20.05■□□□□ 0.8
CACNA1A-235ENST00000637004 SCAPERQ9BY12 1400 aa20.05■□□□□ 0.8
CACNA1A-235ENST00000637004 MAP3K4Q9Y6R4 1608 aa20.04■□□□□ 0.8
CACNA1A-235ENST00000637004 GLI2P10070 1586 aa20.04■□□□□ 0.8
CACNA1A-235ENST00000637004 MAPK8IP3Q9UPT6 1336 aa20.04■□□□□ 0.8
CACNA1A-235ENST00000637004 PODXL2Q9NZ53 605 aa20.03■□□□□ 0.8
CACNA1A-235ENST00000637004 A2MP01023 1474 aa20.03■□□□□ 0.8
CACNA1A-235ENST00000637004 USP19O94966 1318 aa20.03■□□□□ 0.8
CACNA1A-235ENST00000637004 TRMT2AQ8IZ69 625 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-235ENST00000637004 POGKQ9P215 609 aa20.03■□□□□ 0.8
CACNA1A-235ENST00000637004 EIF2AK4Q9P2K8 1649 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-235ENST00000637004 ADGRL1O94910 1474 aa20.01■□□□□ 0.79
CACNA1A-235ENST00000637004 CDC42BPBQ9Y5S2 1711 aa20.01■□□□□ 0.79
CACNA1A-235ENST00000637004 NKTRP30414 1462 aaKnown RBP20.01■□□□□ 0.79
CACNA1A-235ENST00000637004 PPRC1Q5VV67 1664 aaKnown RBP20■□□□□ 0.79
CACNA1A-235ENST00000637004 ARHGEF5Q12774 1597 aa20■□□□□ 0.79
CACNA1A-235ENST00000637004 CGNL1Q0VF96 1302 aa20■□□□□ 0.79
CACNA1A-235ENST00000637004 TRAPPC8Q9Y2L5 1435 aa19.99■□□□□ 0.79
CACNA1A-235ENST00000637004 MYO5CQ9NQX4 1742 aa19.99■□□□□ 0.79
CACNA1A-235ENST00000637004 CCDC141Q6ZP82 1450 aa19.98■□□□□ 0.79
CACNA1A-235ENST00000637004 PDE3AQ14432 1141 aa19.97■□□□□ 0.79
CACNA1A-235ENST00000637004 PIK3C2GO75747 1445 aa19.97■□□□□ 0.79
CACNA1A-235ENST00000637004 E9PSI1 815 aa19.97■□□□□ 0.79
CACNA1A-235ENST00000637004 NINLQ9Y2I6 1382 aa19.96■□□□□ 0.79
CACNA1A-235ENST00000637004 VIRMAQ69YN4 1812 aaKnown RBP19.96■□□□□ 0.79
CACNA1A-235ENST00000637004 AMER1Q5JTC6 1135 aaPredicted RBP19.96■□□□□ 0.79
CACNA1A-235ENST00000637004 RSPH4AQ5TD94 716 aa19.96■□□□□ 0.79
CACNA1A-235ENST00000637004 PLA2R1Q13018 1463 aa19.96■□□□□ 0.79
CACNA1A-235ENST00000637004 MAGI2Q86UL8 1455 aa19.96■□□□□ 0.79
CACNA1A-235ENST00000637004 IGHDP01880 384 aa19.96■□□□□ 0.79
CACNA1A-235ENST00000637004 CDCA8Q53HL2 280 aa19.96■□□□□ 0.79
CACNA1A-235ENST00000637004 NGEFQ8N5V2 710 aa19.96■□□□□ 0.79
CACNA1A-235ENST00000637004 UPF2Q9HAU5 1272 aaKnown RBP19.96■□□□□ 0.79
CACNA1A-235ENST00000637004 SYCP2Q9BX26 1530 aa19.96■□□□□ 0.79
CACNA1A-235ENST00000637004 SLKQ9H2G2 1235 aaPredicted RBP19.95■□□□□ 0.78
CACNA1A-235ENST00000637004 SAMD9LQ8IVG5 1584 aa19.95■□□□□ 0.78
CACNA1A-235ENST00000637004 RRAGDQ9NQL2 400 aaPredicted RBP19.94■□□□□ 0.78
CACNA1A-235ENST00000637004 PREX2Q70Z35 1606 aa19.94■□□□□ 0.78
CACNA1A-235ENST00000637004 BCAR3O75815 825 aa19.94■□□□□ 0.78
CACNA1A-235ENST00000637004 CLUAP1Q96AJ1 413 aa19.93■□□□□ 0.78
CACNA1A-235ENST00000637004 ANTXR1Q9H6X2 564 aa19.93■□□□□ 0.78
CACNA1A-235ENST00000637004 SEC24BO95487 1268 aa19.92■□□□□ 0.78
CACNA1A-235ENST00000637004 NPC1L1Q9UHC9 1359 aa19.91■□□□□ 0.78
CACNA1A-235ENST00000637004 GLIPR1L2Q4G1C9 344 aa19.91■□□□□ 0.78
CACNA1A-235ENST00000637004 ZMYM3Q14202 1370 aa19.9■□□□□ 0.78
CACNA1A-235ENST00000637004 APAF1O14727 1248 aa19.9■□□□□ 0.78
CACNA1A-235ENST00000637004 SPAG9O60271 1321 aaKnown RBP19.9■□□□□ 0.78
CACNA1A-235ENST00000637004 AAMPQ13685 434 aa19.9■□□□□ 0.78
CACNA1A-235ENST00000637004 SPINK5Q9NQ38 1064 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-235ENST00000637004 ASXL1Q8IXJ9 1541 aa19.9■□□□□ 0.78
CACNA1A-235ENST00000637004 CCDC146Q8IYE0 955 aa19.89■□□□□ 0.78
CACNA1A-235ENST00000637004 MLECQ14165 292 aa19.89■□□□□ 0.77
CACNA1A-235ENST00000637004 NEO1Q92859 1461 aa19.89■□□□□ 0.77
CACNA1A-235ENST00000637004 GOLGA6L3A6NEY3 463 aa19.89■□□□□ 0.77
CACNA1A-235ENST00000637004 CANXP27824 592 aaKnown RBP19.89■□□□□ 0.77
CACNA1A-235ENST00000637004 NLRP1Q9C000 1473 aa19.89■□□□□ 0.77
CACNA1A-235ENST00000637004 UNC13BO14795 1591 aa19.88■□□□□ 0.77
CACNA1A-235ENST00000637004 CENPJQ9HC77 1338 aaPredicted RBP19.87■□□□□ 0.77
CACNA1A-235ENST00000637004 SYNMO15061 1565 aa19.87■□□□□ 0.77
CACNA1A-235ENST00000637004 ATP10AO60312 1499 aa19.87■□□□□ 0.77
CACNA1A-235ENST00000637004 YEATS2Q9ULM3 1422 aa19.87■□□□□ 0.77
CACNA1A-235ENST00000637004 PMFBP1Q8TBY8 1022 aa19.87■□□□□ 0.77
CACNA1A-235ENST00000637004 TBC1D32Q96NH3 1257 aa19.87■□□□□ 0.77
CACNA1A-235ENST00000637004 RNF17Q9BXT8 1623 aaKnown RBP19.87■□□□□ 0.77
CACNA1A-235ENST00000637004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.86■□□□□ 0.77
CACNA1A-235ENST00000637004 FSD2A1L4K1 749 aa19.85■□□□□ 0.77
CACNA1A-235ENST00000637004 ABCC1P33527 1531 aa19.85■□□□□ 0.77
CACNA1A-235ENST00000637004 PLPPR3Q6T4P5 718 aa19.84■□□□□ 0.77
CACNA1A-235ENST00000637004 PNNQ9H307 717 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-235ENST00000637004 COG6Q9Y2V7 657 aa19.84■□□□□ 0.77
CACNA1A-235ENST00000637004 XRCC6P12956 609 aaKnown RBP eCLIP19.84■□□□□ 0.77
CACNA1A-235ENST00000637004 TBC1D2Q9BYX2 928 aa19.84■□□□□ 0.77
CACNA1A-235ENST00000637004 POGZQ7Z3K3 1410 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms