RNA–Protein interactions for RNA: ENST00000636947.1

CACNB4-239, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 5,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-239ENST00000636947 HSP90AB1P08238 724 aaKnown RBP10.07□□□□□ -0.8
CACNB4-239ENST00000636947 RBM5P52756 815 aaKnown RBP eCLIP10.07□□□□□ -0.8
CACNB4-239ENST00000636947 IKQ13123 557 aaPredicted RBP10.07□□□□□ -0.8
CACNB4-239ENST00000636947 TMEM87AQ8NBN3 555 aa10.07□□□□□ -0.8
CACNB4-239ENST00000636947 SIN3AQ96ST3 1273 aa10.06□□□□□ -0.8
CACNB4-239ENST00000636947 MPHOSPH9Q99550 1183 aa10.06□□□□□ -0.8
CACNB4-239ENST00000636947 C9orf78Q9NZ63 289 aaPredicted RBP10.06□□□□□ -0.8
CACNB4-239ENST00000636947 LMTK3Q96Q04 1460 aa10.06□□□□□ -0.8
CACNB4-239ENST00000636947 ZPR1O75312 459 aa10.06□□□□□ -0.8
CACNB4-239ENST00000636947 RAPGEF3O95398 923 aa10.06□□□□□ -0.8
CACNB4-239ENST00000636947 STAC3Q96MF2 364 aa10.06□□□□□ -0.8
CACNB4-239ENST00000636947 FAM177BA6PVY3 158 aa10.05□□□□□ -0.8
CACNB4-239ENST00000636947 PLCB2Q00722 1185 aa10.05□□□□□ -0.8
CACNB4-239ENST00000636947 CADPS2Q86UW7 1296 aa10.05□□□□□ -0.8
CACNB4-239ENST00000636947 CHMP4CQ96CF2 233 aa10.05□□□□□ -0.8
CACNB4-239ENST00000636947 TSHZ2Q9NRE2 1034 aa10.05□□□□□ -0.8
CACNB4-239ENST00000636947 SLC52A1Q9NWF4 448 aa10.05□□□□□ -0.8
CACNB4-239ENST00000636947 ARHGAP5Q13017 1502 aa10.05□□□□□ -0.8
CACNB4-239ENST00000636947 MSH6P52701 1360 aa10.05□□□□□ -0.8
CACNB4-239ENST00000636947 AKNAQ7Z591 1439 aa10.05□□□□□ -0.8
CACNB4-239ENST00000636947 HTATSF1O43719 755 aaKnown RBP10.05□□□□□ -0.8
CACNB4-239ENST00000636947 NCAPD3P42695 1498 aa10.04□□□□□ -0.8
CACNB4-239ENST00000636947 CABP4P57796 275 aa10.04□□□□□ -0.8
CACNB4-239ENST00000636947 GRM1Q13255 1194 aa10.04□□□□□ -0.8
CACNB4-239ENST00000636947 TOP2AP11388 1531 aaKnown RBP10.04□□□□□ -0.8
CACNB4-239ENST00000636947 CC2D2AQ9P2K1 1620 aa10.04□□□□□ -0.8
CACNB4-239ENST00000636947 SLC26A8Q96RN1 970 aa10.04□□□□□ -0.8
CACNB4-239ENST00000636947 SPDYE4A6NLX3 237 aa10.03□□□□□ -0.8
CACNB4-239ENST00000636947 ZNF710Q8N1W2 664 aa10.03□□□□□ -0.8
CACNB4-239ENST00000636947 GNL3LQ9NVN8 582 aaKnown RBP10.03□□□□□ -0.8
CACNB4-239ENST00000636947 MSNP26038 577 aaKnown RBP10.03□□□□□ -0.8
CACNB4-239ENST00000636947 SPRYD3Q8NCJ5 442 aa10.03□□□□□ -0.8
CACNB4-239ENST00000636947 AK7Q96M32 723 aa10.02□□□□□ -0.8
CACNB4-239ENST00000636947 ZNF652Q9Y2D9 606 aa10.02□□□□□ -0.8
CACNB4-239ENST00000636947 AFAP1Q8N556 730 aa10.02□□□□□ -0.81
CACNB4-239ENST00000636947 RIC3Q7Z5B4 369 aa10.02□□□□□ -0.81
CACNB4-239ENST00000636947 C8orf37Q96NL8 207 aa10.02□□□□□ -0.81
CACNB4-239ENST00000636947 CCDC27Q2M243 656 aa10.02□□□□□ -0.81
CACNB4-239ENST00000636947 AMER1Q5JTC6 1135 aaPredicted RBP10.02□□□□□ -0.81
CACNB4-239ENST00000636947 TMEM132AQ24JP5 1023 aa10.01□□□□□ -0.81
CACNB4-239ENST00000636947 CD109Q6YHK3 1445 aa10.01□□□□□ -0.81
CACNB4-239ENST00000636947 ROCK1Q13464 1354 aa10.01□□□□□ -0.81
CACNB4-239ENST00000636947 PMFBP1Q8TBY8 1022 aa10.01□□□□□ -0.81
CACNB4-239ENST00000636947 KIF3AQ9Y496 699 aa10.01□□□□□ -0.81
CACNB4-239ENST00000636947 FGD5Q6ZNL6 1462 aa10.01□□□□□ -0.81
CACNB4-239ENST00000636947 TEX14Q8IWB6 1497 aa10.01□□□□□ -0.81
CACNB4-239ENST00000636947 BAG6P46379 1132 aa10.01□□□□□ -0.81
CACNB4-239ENST00000636947 APPP05067 770 aa10□□□□□ -0.81
CACNB4-239ENST00000636947 MAP3K9P80192 1104 aa10□□□□□ -0.81
CACNB4-239ENST00000636947 HSCBQ8IWL3 235 aa10□□□□□ -0.81
CACNB4-239ENST00000636947 PLEKHH2Q8IVE3 1493 aa10□□□□□ -0.81
CACNB4-239ENST00000636947 EXOC5O00471 708 aa10□□□□□ -0.81
CACNB4-239ENST00000636947 CCER2I3L3R5 266 aa10□□□□□ -0.81
CACNB4-239ENST00000636947 ITPRIPQ8IWB1 547 aa9.99□□□□□ -0.81
CACNB4-239ENST00000636947 RAD54L2Q9Y4B4 1467 aa9.99□□□□□ -0.81
CACNB4-239ENST00000636947 SLC4A3P48751 1232 aa9.99□□□□□ -0.81
CACNB4-239ENST00000636947 STK32BQ9NY57 414 aa9.99□□□□□ -0.81
CACNB4-239ENST00000636947 PAF1Q8N7H5 531 aa9.99□□□□□ -0.81
CACNB4-239ENST00000636947 ERICH2A1L162 156 aa9.99□□□□□ -0.81
CACNB4-239ENST00000636947 TRIM6-TRIM34B2RNG4 842 aa9.99□□□□□ -0.81
CACNB4-239ENST00000636947 CPLX2Q6PUV4 134 aaKnown RBP9.99□□□□□ -0.81
CACNB4-239ENST00000636947 NF2P35240 595 aa9.99□□□□□ -0.81
CACNB4-239ENST00000636947 TIMELESSQ9UNS1 1208 aa9.99□□□□□ -0.81
CACNB4-239ENST00000636947 KCNH5Q8NCM2 988 aa9.98□□□□□ -0.81
CACNB4-239ENST00000636947 ZNF692Q9BU19 519 aaPredicted RBP9.98□□□□□ -0.81
CACNB4-239ENST00000636947 MPHOSPH10O00566 681 aaKnown RBP9.98□□□□□ -0.81
CACNB4-239ENST00000636947 DIAPH1O60610 1272 aaKnown RBP9.98□□□□□ -0.81
CACNB4-239ENST00000636947 SLC3A2P08195 630 aaKnown RBP9.98□□□□□ -0.81
CACNB4-239ENST00000636947 SCAPERQ9BY12 1400 aa9.98□□□□□ -0.81
CACNB4-239ENST00000636947 CENPJQ9HC77 1338 aaPredicted RBP9.97□□□□□ -0.81
CACNB4-239ENST00000636947 BICDL1Q6ZP65 573 aa9.97□□□□□ -0.81
CACNB4-239ENST00000636947 ZSCAN29Q8IWY8 852 aaPredicted RBP9.97□□□□□ -0.81
CACNB4-239ENST00000636947 RRP7AQ9Y3A4 280 aaKnown RBP9.97□□□□□ -0.81
CACNB4-239ENST00000636947 STARD3NLO95772 234 aa9.96□□□□□ -0.81
CACNB4-239ENST00000636947 TRDNQ13061 729 aa9.96□□□□□ -0.81
CACNB4-239ENST00000636947 G3BP1Q13283 466 aaKnown RBP eCLIP9.96□□□□□ -0.81
CACNB4-239ENST00000636947 RALBP1Q15311 655 aa9.96□□□□□ -0.82
CACNB4-239ENST00000636947 ARID3AQ99856 593 aa9.96□□□□□ -0.82
CACNB4-239ENST00000636947 GPR162Q16538 588 aa9.96□□□□□ -0.82
CACNB4-239ENST00000636947 GAS2L2Q8NHY3 880 aa9.96□□□□□ -0.82
CACNB4-239ENST00000636947 SNAPC4Q5SXM2 1469 aa9.96□□□□□ -0.82
CACNB4-239ENST00000636947 PLIN1O60240 522 aa9.96□□□□□ -0.82
CACNB4-239ENST00000636947 MYCNP04198 464 aaPredicted RBP9.96□□□□□ -0.82
CACNB4-239ENST00000636947 LMOD1P29536 600 aaPredicted RBP9.96□□□□□ -0.82
CACNB4-239ENST00000636947 PRDM2Q13029 1718 aa9.95□□□□□ -0.82
CACNB4-239ENST00000636947 SMARCA4P51532 1647 aa9.95□□□□□ -0.82
CACNB4-239ENST00000636947 TCERG1O14776 1098 aaKnown RBP9.95□□□□□ -0.82
CACNB4-239ENST00000636947 FYB1O15117 783 aa9.95□□□□□ -0.82
CACNB4-239ENST00000636947 BCL2L13Q9BXK5 485 aa9.95□□□□□ -0.82
CACNB4-239ENST00000636947 ZRANB1Q9UGI0 708 aa9.95□□□□□ -0.82
CACNB4-239ENST00000636947 ZC3H6P61129 1189 aaKnown RBP9.95□□□□□ -0.82
CACNB4-239ENST00000636947 XPCQ01831 940 aaPredicted RBP9.95□□□□□ -0.82
CACNB4-239ENST00000636947 AIMP1Q12904 312 aaKnown RBP9.95□□□□□ -0.82
CACNB4-239ENST00000636947 TMOD3Q9NYL9 352 aa9.95□□□□□ -0.82
CACNB4-239ENST00000636947 RPGRQ92834 1020 aaKnown RBP9.94□□□□□ -0.82
CACNB4-239ENST00000636947 TBC1D2BQ9UPU7 963 aa9.94□□□□□ -0.82
CACNB4-239ENST00000636947 KIF15Q9NS87 1388 aa9.94□□□□□ -0.82
CACNB4-239ENST00000636947 CCDC47Q96A33 483 aaKnown RBP9.94□□□□□ -0.82
CACNB4-239ENST00000636947 GZF1Q9H116 711 aaPredicted RBP9.94□□□□□ -0.82
CACNB4-239ENST00000636947 TSPYL4Q9UJ04 414 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms