RNA–Protein interactions for RNA: ENST00000636775.1

LGI1-223, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,050 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-223	ENST00000636775	SYNM	O15061	1565 aa		13.02	□□□□□ -0.32
LGI1-223	ENST00000636775	PREX1	Q8TCU6	1659 aa		13.02	□□□□□ -0.32
LGI1-223	ENST00000636775	ST20-MTHFS	A0A0A6YYL1	179 aa		13.02	□□□□□ -0.33
LGI1-223	ENST00000636775	MYOM2	P54296	1465 aa		13.01	□□□□□ -0.33
LGI1-223	ENST00000636775	AGL	P35573	1532 aa		13	□□□□□ -0.33
LGI1-223	ENST00000636775	CLTC	Q00610	1675 aa	Known RBP	12.98	□□□□□ -0.33
LGI1-223	ENST00000636775	WASHC2C	Q9Y4E1	1318 aa		12.98	□□□□□ -0.33
LGI1-223	ENST00000636775	GTF3C3	Q9Y5Q9	886 aa		12.98	□□□□□ -0.33
LGI1-223	ENST00000636775	NOS1	P29475	1434 aa		12.97	□□□□□ -0.33
LGI1-223	ENST00000636775	STAC3	Q96MF2	364 aa		12.97	□□□□□ -0.33
LGI1-223	ENST00000636775	POLR3GL	Q9BT43	218 aa		12.97	□□□□□ -0.33
LGI1-223	ENST00000636775	NRXN1	Q9ULB1	1477 aa		12.96	□□□□□ -0.33
LGI1-223	ENST00000636775	ARHGAP31	Q2M1Z3	1444 aa		12.96	□□□□□ -0.34
LGI1-223	ENST00000636775	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.95	□□□□□ -0.34
LGI1-223	ENST00000636775	MLEC	Q14165	292 aa		12.95	□□□□□ -0.34
LGI1-223	ENST00000636775	MYO3A	Q8NEV4	1616 aa		12.94	□□□□□ -0.34
LGI1-223	ENST00000636775	MYOM1	P52179	1685 aa		12.93	□□□□□ -0.34
LGI1-223	ENST00000636775	TESK2	Q96S53	571 aa		12.93	□□□□□ -0.34
LGI1-223	ENST00000636775	DISP3	Q9P2K9	1392 aa		12.93	□□□□□ -0.34
LGI1-223	ENST00000636775	SCAF11	Q99590	1463 aa	Known RBP	12.93	□□□□□ -0.34
LGI1-223	ENST00000636775	NEXMIF	Q5QGS0	1516 aa		12.93	□□□□□ -0.34
LGI1-223	ENST00000636775	SETBP1	Q9Y6X0	1596 aa		12.92	□□□□□ -0.34
LGI1-223	ENST00000636775	LMTK3	Q96Q04	1460 aa		12.92	□□□□□ -0.34
LGI1-223	ENST00000636775	TMEM131L	A2VDJ0	1609 aa		12.92	□□□□□ -0.34
LGI1-223	ENST00000636775	KDM5A	P29375	1690 aa	Known RBP	12.91	□□□□□ -0.34
LGI1-223	ENST00000636775	ADGRF5	Q8IZF2	1346 aa		12.91	□□□□□ -0.34
LGI1-223	ENST00000636775	CCDC184	Q52MB2	194 aa		12.91	□□□□□ -0.34
LGI1-223	ENST00000636775	C3	P01024	1663 aa		12.9	□□□□□ -0.34
LGI1-223	ENST00000636775	QRICH2	Q9H0J4	1663 aa		12.9	□□□□□ -0.35
LGI1-223	ENST00000636775	CHGA	P10645	457 aa	Known RBP	12.89	□□□□□ -0.35
LGI1-223	ENST00000636775	SETD1B	Q9UPS6	1966 aa	Known RBP	12.89	□□□□□ -0.35
LGI1-223	ENST00000636775	PIK3C2G	O75747	1445 aa		12.89	□□□□□ -0.35
LGI1-223	ENST00000636775	ARHGEF28	Q8N1W1	1705 aa	Known RBP	12.88	□□□□□ -0.35
LGI1-223	ENST00000636775	CFAP70	Q5T0N1	1121 aa		12.87	□□□□□ -0.35
LGI1-223	ENST00000636775	ERVK-7	P63135	1459 aa		12.87	□□□□□ -0.35
LGI1-223	ENST00000636775	ADGRB1	O14514	1584 aa		12.87	□□□□□ -0.35
LGI1-223	ENST00000636775	TMF1	P82094	1093 aa		12.85	□□□□□ -0.35
LGI1-223	ENST00000636775	SPATA31D1	Q6ZQQ2	1576 aa		12.85	□□□□□ -0.35
LGI1-223	ENST00000636775	EIF3A	Q14152	1382 aa	Known RBP	12.85	□□□□□ -0.35
LGI1-223	ENST00000636775	RPGRIP1L	Q68CZ1	1315 aa		12.85	□□□□□ -0.35
LGI1-223	ENST00000636775	IDI1	Q13907	227 aa		12.84	□□□□□ -0.35
LGI1-223	ENST00000636775	CNGB1	Q14028	1251 aa	Predicted RBP	12.84	□□□□□ -0.35
LGI1-223	ENST00000636775	PLPPR3	Q6T4P5	718 aa		12.84	□□□□□ -0.35
LGI1-223	ENST00000636775	ESF1	Q9H501	851 aa	Known RBP	12.84	□□□□□ -0.35
LGI1-223	ENST00000636775	MRS2	Q9HD23	443 aa		12.84	□□□□□ -0.35
LGI1-223	ENST00000636775	CEBPA	P49715	358 aa	Predicted RBP	12.83	□□□□□ -0.36
LGI1-223	ENST00000636775	SLC52A1	Q9NWF4	448 aa		12.82	□□□□□ -0.36
LGI1-223	ENST00000636775	PPP6R1	Q9UPN7	881 aa		12.82	□□□□□ -0.36
LGI1-223	ENST00000636775	PER1	O15534	1290 aa	Predicted RBP	12.81	□□□□□ -0.36
LGI1-223	ENST00000636775	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.81	□□□□□ -0.36
LGI1-223	ENST00000636775	ASXL1	Q8IXJ9	1541 aa		12.81	□□□□□ -0.36
LGI1-223	ENST00000636775	C14orf93	Q9H972	538 aa	Known RBP	12.81	□□□□□ -0.36
LGI1-223	ENST00000636775	SETD1A	O15047	1707 aa	Known RBP	12.8	□□□□□ -0.36
LGI1-223	ENST00000636775	KTN1	Q86UP2	1357 aa	Known RBP	12.8	□□□□□ -0.36
LGI1-223	ENST00000636775	ZFYVE9	O95405	1425 aa		12.8	□□□□□ -0.36
LGI1-223	ENST00000636775	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
LGI1-223	ENST00000636775	FAM9B	Q8IZU0	186 aa		12.79	□□□□□ -0.36
LGI1-223	ENST00000636775	ZMYM3	Q14202	1370 aa		12.79	□□□□□ -0.36
LGI1-223	ENST00000636775	PARD3	Q8TEW0	1356 aa		12.79	□□□□□ -0.36
LGI1-223	ENST00000636775	HSPA2	P54652	639 aa		12.78	□□□□□ -0.36
LGI1-223	ENST00000636775	NUTM2D	Q5VT03	806 aa	Predicted RBP	12.78	□□□□□ -0.36
LGI1-223	ENST00000636775	PANK3	Q9H999	370 aa		12.78	□□□□□ -0.36
LGI1-223	ENST00000636775	SBNO2	Q9Y2G9	1366 aa		12.77	□□□□□ -0.36
LGI1-223	ENST00000636775	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.77	□□□□□ -0.36
LGI1-223	ENST00000636775	VGF	O15240	615 aa	Predicted RBP	12.77	□□□□□ -0.37
LGI1-223	ENST00000636775	RALBP1	Q15311	655 aa		12.77	□□□□□ -0.37
LGI1-223	ENST00000636775	STRC	Q7RTU9	1775 aa		12.76	□□□□□ -0.37
LGI1-223	ENST00000636775	ZNF142	P52746	1687 aa	Predicted RBP	12.76	□□□□□ -0.37
LGI1-223	ENST00000636775	UBR1	Q8IWV7	1749 aa		12.76	□□□□□ -0.37
LGI1-223	ENST00000636775	CDCA8	Q53HL2	280 aa		12.76	□□□□□ -0.37
LGI1-223	ENST00000636775	TMEM132E	Q6IEE7	984 aa		12.76	□□□□□ -0.37
LGI1-223	ENST00000636775	A2ML1	A8K2U0	1454 aa		12.75	□□□□□ -0.37
LGI1-223	ENST00000636775	ALK	Q9UM73	1620 aa		12.75	□□□□□ -0.37
LGI1-223	ENST00000636775	BRD4	O60885	1362 aa	Predicted RBP	12.75	□□□□□ -0.37
LGI1-223	ENST00000636775	TRAK1	Q9UPV9	953 aa		12.75	□□□□□ -0.37
LGI1-223	ENST00000636775	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.75	□□□□□ -0.37
LGI1-223	ENST00000636775	NRXN3	Q9Y4C0	1643 aa		12.74	□□□□□ -0.37
LGI1-223	ENST00000636775	SLC24A1	O60721	1099 aa		12.73	□□□□□ -0.37
LGI1-223	ENST00000636775	TULP4	Q9NRJ4	1543 aa		12.73	□□□□□ -0.37
LGI1-223	ENST00000636775	CC2D1B	Q5T0F9	858 aa	Known RBP	12.72	□□□□□ -0.37
LGI1-223	ENST00000636775	TMC1	Q8TDI8	760 aa		12.71	□□□□□ -0.37
LGI1-223	ENST00000636775	PNISR	Q8TF01	805 aa	Known RBP	12.71	□□□□□ -0.37
LGI1-223	ENST00000636775	LRPPRC	P42704	1394 aa	Known RBP	12.71	□□□□□ -0.37
LGI1-223	ENST00000636775	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.71	□□□□□ -0.37
LGI1-223	ENST00000636775	ZBED9	Q6R2W3	1325 aa		12.7	□□□□□ -0.38
LGI1-223	ENST00000636775	NLRP13	Q86W25	1043 aa		12.69	□□□□□ -0.38
LGI1-223	ENST00000636775	RIMS2	Q9UQ26	1411 aa		12.69	□□□□□ -0.38
LGI1-223	ENST00000636775	USP32	Q8NFA0	1604 aa		12.69	□□□□□ -0.38
LGI1-223	ENST00000636775	SENP3	Q9H4L4	574 aa	Predicted RBP	12.69	□□□□□ -0.38
LGI1-223	ENST00000636775	STAG3	Q9UJ98	1225 aa		12.69	□□□□□ -0.38
LGI1-223	ENST00000636775	KNDC1	Q76NI1	1749 aa		12.68	□□□□□ -0.38
LGI1-223	ENST00000636775	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.68	□□□□□ -0.38
LGI1-223	ENST00000636775	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.68	□□□□□ -0.38
LGI1-223	ENST00000636775	YTHDC2	Q9H6S0	1430 aa	Known RBP	12.68	□□□□□ -0.38
LGI1-223	ENST00000636775	KNSTRN	Q9Y448	316 aa		12.68	□□□□□ -0.38
LGI1-223	ENST00000636775	TNR	Q92752	1358 aa		12.67	□□□□□ -0.38
LGI1-223	ENST00000636775	NPC1L1	Q9UHC9	1359 aa		12.67	□□□□□ -0.38
LGI1-223	ENST00000636775	DMRT2	Q9Y5R5	561 aa		12.66	□□□□□ -0.38
LGI1-223	ENST00000636775	ANKRD26	Q9UPS8	1709 aa		12.65	□□□□□ -0.38
LGI1-223	ENST00000636775	DLC1	Q96QB1	1528 aa		12.65	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms