RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 SHROOM2Q13796 1616 aa28.28■■■□□ 2.12
CLN5-215ENST00000636767 CENPQQ7L2Z9 268 aaPredicted RBP28.26■■■□□ 2.12
CLN5-215ENST00000636767 MYOM1P52179 1685 aa28.26■■■□□ 2.11
CLN5-215ENST00000636767 ASXL1Q8IXJ9 1541 aa28.26■■■□□ 2.11
CLN5-215ENST00000636767 SCAF11Q99590 1463 aaKnown RBP28.25■■■□□ 2.11
CLN5-215ENST00000636767 TRPM2O94759 1503 aa28.25■■■□□ 2.11
CLN5-215ENST00000636767 PIK3C2GO75747 1445 aa28.24■■■□□ 2.11
CLN5-215ENST00000636767 CEP152O94986 1710 aa28.24■■■□□ 2.11
CLN5-215ENST00000636767 GOLGA2Q08379 1002 aa28.24■■■□□ 2.11
CLN5-215ENST00000636767 ABCC1P33527 1531 aa28.23■■■□□ 2.11
CLN5-215ENST00000636767 PLCH2O75038 1416 aa28.22■■■□□ 2.11
CLN5-215ENST00000636767 SCAPERQ9BY12 1400 aa28.22■■■□□ 2.11
CLN5-215ENST00000636767 CDCA8Q53HL2 280 aa28.2■■■□□ 2.1
CLN5-215ENST00000636767 ERCC6L2Q5T890 1561 aa28.2■■■□□ 2.1
CLN5-215ENST00000636767 CLTCL1P53675 1640 aa28.19■■■□□ 2.1
CLN5-215ENST00000636767 TRAPPC8Q9Y2L5 1435 aa28.19■■■□□ 2.1
CLN5-215ENST00000636767 SLFN5Q08AF3 891 aa28.18■■■□□ 2.1
CLN5-215ENST00000636767 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.17■■■□□ 2.1
CLN5-215ENST00000636767 NPC1L1Q9UHC9 1359 aa28.17■■■□□ 2.1
CLN5-215ENST00000636767 PTPRTO14522 1441 aa28.15■■■□□ 2.1
CLN5-215ENST00000636767 C8orf34Q49A92 452 aa28.15■■■□□ 2.1
CLN5-215ENST00000636767 EFCAB2Q5VUJ9 269 aa28.15■■■□□ 2.1
CLN5-215ENST00000636767 FAM161AQ3B820 660 aa28.14■■■□□ 2.1
CLN5-215ENST00000636767 TRMT2AQ8IZ69 625 aaKnown RBP28.14■■■□□ 2.1
CLN5-215ENST00000636767 KDM5AP29375 1690 aaKnown RBP28.13■■■□□ 2.09
CLN5-215ENST00000636767 CCDC146Q8IYE0 955 aa28.12■■■□□ 2.09
CLN5-215ENST00000636767 ZCCHC11Q5TAX3 1644 aaKnown RBP28.12■■■□□ 2.09
CLN5-215ENST00000636767 STAC3Q96MF2 364 aa28.11■■■□□ 2.09
CLN5-215ENST00000636767 DEPDC5O75140 1603 aa28.11■■■□□ 2.09
CLN5-215ENST00000636767 IL27Q8NEV9 243 aa28.1■■■□□ 2.09
CLN5-215ENST00000636767 KIAA1210Q9ULL0 1709 aa28.1■■■□□ 2.09
CLN5-215ENST00000636767 NKTRP30414 1462 aaKnown RBP28.1■■■□□ 2.09
CLN5-215ENST00000636767 ZFYVE16Q7Z3T8 1539 aa28.1■■■□□ 2.09
CLN5-215ENST00000636767 EIF3AQ14152 1382 aaKnown RBP28.1■■■□□ 2.09
CLN5-215ENST00000636767 SPINK5Q9NQ38 1064 aaPredicted RBP28.09■■■□□ 2.09
CLN5-215ENST00000636767 SLC4A3P48751 1232 aa28.09■■■□□ 2.09
CLN5-215ENST00000636767 TET3O43151 1660 aa28.08■■■□□ 2.09
CLN5-215ENST00000636767 RTEL1-TNFRSF6BF6WH68 1400 aa28.06■■■□□ 2.08
CLN5-215ENST00000636767 SPAG9O60271 1321 aaKnown RBP28.06■■■□□ 2.08
CLN5-215ENST00000636767 APAF1O14727 1248 aa28.06■■■□□ 2.08
CLN5-215ENST00000636767 NFKBIBQ15653 356 aa28.06■■■□□ 2.08
CLN5-215ENST00000636767 RGS3P49796 1198 aa28.03■■■□□ 2.08
CLN5-215ENST00000636767 ERVK-7P63135 1459 aa28.02■■■□□ 2.08
CLN5-215ENST00000636767 BCAR3O75815 825 aa28.01■■■□□ 2.07
CLN5-215ENST00000636767 DAXXQ9UER7 740 aaPredicted RBP28.01■■■□□ 2.07
CLN5-215ENST00000636767 VWDEQ8N2E2 1590 aa28■■■□□ 2.07
CLN5-215ENST00000636767 E9PSI1 815 aa28■■■□□ 2.07
CLN5-215ENST00000636767 AFAP1Q8N556 730 aa28■■■□□ 2.07
CLN5-215ENST00000636767 NEURL4Q96JN8 1562 aa28■■■□□ 2.07
CLN5-215ENST00000636767 ABCA6Q8N139 1617 aa27.99■■■□□ 2.07
CLN5-215ENST00000636767 MAP3K4Q9Y6R4 1608 aa27.98■■■□□ 2.07
CLN5-215ENST00000636767 DMRT2Q9Y5R5 561 aa27.98■■■□□ 2.07
CLN5-215ENST00000636767 VIRMAQ69YN4 1812 aaKnown RBP27.98■■■□□ 2.07
CLN5-215ENST00000636767 UHRF1BP1LA0JNW5 1464 aa27.97■■■□□ 2.07
CLN5-215ENST00000636767 GSE1Q14687 1217 aa27.97■■■□□ 2.07
CLN5-215ENST00000636767 ARAP3Q8WWN8 1544 aa27.96■■■□□ 2.07
CLN5-215ENST00000636767 MYOM2P54296 1465 aa27.95■■■□□ 2.07
CLN5-215ENST00000636767 CARD14Q9BXL6 1004 aa27.95■■■□□ 2.06
CLN5-215ENST00000636767 CFAP70Q5T0N1 1121 aa27.94■■■□□ 2.06
CLN5-215ENST00000636767 INO80Q9ULG1 1556 aaPredicted RBP27.93■■■□□ 2.06
CLN5-215ENST00000636767 KANK1Q14678 1352 aa27.93■■■□□ 2.06
CLN5-215ENST00000636767 UGGT1Q9NYU2 1555 aa27.93■■■□□ 2.06
CLN5-215ENST00000636767 NGEFQ8N5V2 710 aa27.92■■■□□ 2.06
CLN5-215ENST00000636767 ATP7AQ04656 1500 aa27.92■■■□□ 2.06
CLN5-215ENST00000636767 IGHDP01880 384 aa27.92■■■□□ 2.06
CLN5-215ENST00000636767 RTN4Q9NQC3 1192 aaKnown RBP27.91■■■□□ 2.06
CLN5-215ENST00000636767 SLC24A1O60721 1099 aa27.9■■■□□ 2.06
CLN5-215ENST00000636767 IFT172Q9UG01 1749 aa27.89■■■□□ 2.06
CLN5-215ENST00000636767 MYO3AQ8NEV4 1616 aa27.89■■■□□ 2.06
CLN5-215ENST00000636767 CGNL1Q0VF96 1302 aa27.89■■■□□ 2.06
CLN5-215ENST00000636767 ADGRF5Q8IZF2 1346 aa27.89■■■□□ 2.06
CLN5-215ENST00000636767 PDE3AQ14432 1141 aa27.88■■■□□ 2.05
CLN5-215ENST00000636767 NINLQ9Y2I6 1382 aa27.88■■■□□ 2.05
CLN5-215ENST00000636767 MROH1Q8NDA8 1641 aa27.88■■■□□ 2.05
CLN5-215ENST00000636767 POLR3AO14802 1390 aaPredicted RBP27.88■■■□□ 2.05
CLN5-215ENST00000636767 KIF1BO60333 1816 aa27.87■■■□□ 2.05
CLN5-215ENST00000636767 CENPJQ9HC77 1338 aaPredicted RBP27.86■■■□□ 2.05
CLN5-215ENST00000636767 FRAT1Q92837 279 aaPredicted RBP27.86■■■□□ 2.05
CLN5-215ENST00000636767 SHPRHQ149N8 1683 aa27.86■■■□□ 2.05
CLN5-215ENST00000636767 MROH2AA6NES4 1674 aa27.85■■■□□ 2.05
CLN5-215ENST00000636767 WWC1Q8IX03 1113 aa27.85■■■□□ 2.05
CLN5-215ENST00000636767 USP19O94966 1318 aa27.84■■■□□ 2.05
CLN5-215ENST00000636767 KIF3BO15066 747 aa27.84■■■□□ 2.05
CLN5-215ENST00000636767 CLUAP1Q96AJ1 413 aa27.84■■■□□ 2.05
CLN5-215ENST00000636767 SBNO2Q9Y2G9 1366 aa27.83■■■□□ 2.05
CLN5-215ENST00000636767 ABCA9Q8IUA7 1624 aa27.83■■■□□ 2.04
CLN5-215ENST00000636767 BRPF3Q9ULD4 1205 aa27.82■■■□□ 2.04
CLN5-215ENST00000636767 NRXN1Q9ULB1 1477 aa27.82■■■□□ 2.04
CLN5-215ENST00000636767 PANK1Q8TE04 598 aa27.82■■■□□ 2.04
CLN5-215ENST00000636767 FRAT2O75474 233 aaPredicted RBP27.81■■■□□ 2.04
CLN5-215ENST00000636767 COG6Q9Y2V7 657 aa27.81■■■□□ 2.04
CLN5-215ENST00000636767 EFCAB6Q5THR3 1501 aa27.81■■■□□ 2.04
CLN5-215ENST00000636767 MAPK8IP3Q9UPT6 1336 aa27.8■■■□□ 2.04
CLN5-215ENST00000636767 CANXP27824 592 aaKnown RBP27.79■■■□□ 2.04
CLN5-215ENST00000636767 FANCAO15360 1455 aa27.79■■■□□ 2.04
CLN5-215ENST00000636767 IQSEC2Q5JU85 1478 aa27.78■■■□□ 2.04
CLN5-215ENST00000636767 NSD3Q9BZ95 1437 aa27.77■■■□□ 2.04
CLN5-215ENST00000636767 ANO8Q9HCE9 1232 aaPredicted RBP27.77■■■□□ 2.04
CLN5-215ENST00000636767 PPRC1Q5VV67 1664 aaKnown RBP27.75■■■□□ 2.03
CLN5-215ENST00000636767 SEC24BO95487 1268 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms