RNA–Protein interactions for RNA: ENST00000636662.2

SCN2A-212, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,456 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-212ENST00000636662 MYO6Q9UM54 1294 aa6.79□□□□□ -1.32
SCN2A-212ENST00000636662 MSH5O43196 834 aa6.79□□□□□ -1.32
SCN2A-212ENST00000636662 NBPF1Q3BBV0 1214 aa6.79□□□□□ -1.32
SCN2A-212ENST00000636662 DHX57Q6P158 1386 aaKnown RBP6.78□□□□□ -1.32
SCN2A-212ENST00000636662 NAP1L1P55209 391 aaKnown RBP6.78□□□□□ -1.32
SCN2A-212ENST00000636662 UQCRHLA0A096LP55 91 aa6.78□□□□□ -1.32
SCN2A-212ENST00000636662 GOLGA6L10A0A0M3HER8 536 aa6.78□□□□□ -1.32
SCN2A-212ENST00000636662 GOLGA6L10A6NI86 522 aa6.78□□□□□ -1.32
SCN2A-212ENST00000636662 UQCRHP07919 91 aa6.78□□□□□ -1.32
SCN2A-212ENST00000636662 SOGA3Q5TF21 947 aa6.78□□□□□ -1.32
SCN2A-212ENST00000636662 MTUS2Q5JR59 1369 aa6.78□□□□□ -1.32
SCN2A-212ENST00000636662 BECN2A8MW95 431 aa6.78□□□□□ -1.32
SCN2A-212ENST00000636662 CT47B1P0C2W7 299 aaPredicted RBP6.77□□□□□ -1.33
SCN2A-212ENST00000636662 CNKSR2Q8WXI2 1034 aa6.77□□□□□ -1.33
SCN2A-212ENST00000636662 GRPEL1Q9HAV7 217 aa6.77□□□□□ -1.33
SCN2A-212ENST00000636662 CEP63Q96MT8 703 aa6.77□□□□□ -1.33
SCN2A-212ENST00000636662 BACH2Q9BYV9 841 aa6.77□□□□□ -1.33
SCN2A-212ENST00000636662 ENOX2Q16206 610 aaKnown RBP6.77□□□□□ -1.33
SCN2A-212ENST00000636662 ZNF622Q969S3 477 aaKnown RBP eCLIP6.77□□□□□ -1.33
SCN2A-212ENST00000636662 SF3A1Q15459 793 aaKnown RBP6.77□□□□□ -1.33
SCN2A-212ENST00000636662 UTP14CQ5TAP6 766 aaKnown RBP6.77□□□□□ -1.33
SCN2A-212ENST00000636662 KNSTRNQ9Y448 316 aa6.77□□□□□ -1.33
SCN2A-212ENST00000636662 ARHGAP35Q9NRY4 1499 aa6.77□□□□□ -1.33
SCN2A-212ENST00000636662 IPO7O95373 1038 aaKnown RBP6.77□□□□□ -1.33
SCN2A-212ENST00000636662 DDX11Q96FC9 970 aa6.77□□□□□ -1.33
SCN2A-212ENST00000636662 TRAK2O60296 914 aa6.76□□□□□ -1.33
SCN2A-212ENST00000636662 HSP90AB2PQ58FF8 381 aa6.76□□□□□ -1.33
SCN2A-212ENST00000636662 TMCO5BA8MYB1 307 aa6.76□□□□□ -1.33
SCN2A-212ENST00000636662 FOXD4L6Q3SYB3 417 aaPredicted RBP6.76□□□□□ -1.33
SCN2A-212ENST00000636662 TTLL5Q6EMB2 1281 aa6.76□□□□□ -1.33
SCN2A-212ENST00000636662 FOXD4L3Q6VB84 417 aaPredicted RBP6.76□□□□□ -1.33
SCN2A-212ENST00000636662 CGNQ9P2M7 1197 aaKnown RBP6.76□□□□□ -1.33
SCN2A-212ENST00000636662 FLIIQ13045 1269 aa6.76□□□□□ -1.33
SCN2A-212ENST00000636662 CCDC94Q9BW85 323 aaPredicted RBP6.76□□□□□ -1.33
SCN2A-212ENST00000636662 GORABQ5T7V8 394 aa6.76□□□□□ -1.33
SCN2A-212ENST00000636662 CFAP57Q96MR6 1250 aa6.76□□□□□ -1.33
SCN2A-212ENST00000636662 PPP1R15AO75807 674 aaPredicted RBP6.76□□□□□ -1.33
SCN2A-212ENST00000636662 NEUROD2Q15784 382 aa6.76□□□□□ -1.33
SCN2A-212ENST00000636662 SEPT7Q16181 437 aaKnown RBP6.76□□□□□ -1.33
SCN2A-212ENST00000636662 ODF2Q5BJF6 829 aa6.76□□□□□ -1.33
SCN2A-212ENST00000636662 U2SURPO15042 1029 aaKnown RBP6.76□□□□□ -1.33
SCN2A-212ENST00000636662 VPS53Q5VIR6 699 aa6.76□□□□□ -1.33
SCN2A-212ENST00000636662 NOL8Q76FK4 1167 aaKnown RBP6.75□□□□□ -1.33
SCN2A-212ENST00000636662 NLRP13Q86W25 1043 aa6.75□□□□□ -1.33
SCN2A-212ENST00000636662 FEZ1Q99689 392 aa6.75□□□□□ -1.33
SCN2A-212ENST00000636662 IFT57Q9NWB7 429 aa6.75□□□□□ -1.33
SCN2A-212ENST00000636662 SPATA24Q86W54 205 aa6.75□□□□□ -1.33
SCN2A-212ENST00000636662 PLCD3Q8N3E9 789 aa6.75□□□□□ -1.33
SCN2A-212ENST00000636662 FAM184BQ9ULE4 1060 aa6.75□□□□□ -1.33
SCN2A-212ENST00000636662 SCRIBQ14160 1630 aa6.75□□□□□ -1.33
SCN2A-212ENST00000636662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.75□□□□□ -1.33
SCN2A-212ENST00000636662 EIF3JO75822 258 aaKnown RBP6.75□□□□□ -1.33
SCN2A-212ENST00000636662 LMOD3Q0VAK6 560 aa6.75□□□□□ -1.33
SCN2A-212ENST00000636662 CAGE1Q8TC20 777 aa6.75□□□□□ -1.33
SCN2A-212ENST00000636662 CNTLNQ9NXG0 1405 aa6.75□□□□□ -1.33
SCN2A-212ENST00000636662 POLR3GO15318 223 aaPredicted RBP6.74□□□□□ -1.33
SCN2A-212ENST00000636662 PAIP2Q9BPZ3 127 aaKnown RBP6.74□□□□□ -1.33
SCN2A-212ENST00000636662 DZIP1Q86YF9 867 aaKnown RBP6.74□□□□□ -1.33
SCN2A-212ENST00000636662 APBB1O00213 710 aa6.74□□□□□ -1.33
SCN2A-212ENST00000636662 MARCH6O60337 910 aa6.74□□□□□ -1.33
SCN2A-212ENST00000636662 FMN1Q68DA7 1419 aa6.74□□□□□ -1.33
SCN2A-212ENST00000636662 GTF2A1P52655 376 aaPredicted RBP6.74□□□□□ -1.33
SCN2A-212ENST00000636662 PRDM10Q9NQV6 1147 aa6.74□□□□□ -1.33
SCN2A-212ENST00000636662 RAB3GAP2Q9H2M9 1393 aa6.74□□□□□ -1.33
SCN2A-212ENST00000636662 MCM2P49736 904 aa6.74□□□□□ -1.33
SCN2A-212ENST00000636662 ZFYVE27Q5T4F4 411 aa6.74□□□□□ -1.33
SCN2A-212ENST00000636662 KIF21BO75037 1637 aa6.74□□□□□ -1.33
SCN2A-212ENST00000636662 MYBBP1AQ9BQG0 1328 aaKnown RBP6.73□□□□□ -1.33
SCN2A-212ENST00000636662 KIF7Q2M1P5 1343 aa6.73□□□□□ -1.33
SCN2A-212ENST00000636662 TRERF1Q96PN7 1200 aa6.73□□□□□ -1.33
SCN2A-212ENST00000636662 CWC22Q9HCG8 908 aaKnown RBP6.73□□□□□ -1.33
SCN2A-212ENST00000636662 TRIM6-TRIM34B2RNG4 842 aa6.73□□□□□ -1.33
SCN2A-212ENST00000636662 CT47A1Q5JQC4 288 aaPredicted RBP6.73□□□□□ -1.33
SCN2A-212ENST00000636662 RABEP1Q15276 862 aa6.73□□□□□ -1.33
SCN2A-212ENST00000636662 TUBB4AP04350 444 aa6.73□□□□□ -1.33
SCN2A-212ENST00000636662 DDX23Q9BUQ8 820 aaKnown RBP6.73□□□□□ -1.33
SCN2A-212ENST00000636662 TXLNBQ8N3L3 684 aa6.73□□□□□ -1.33
SCN2A-212ENST00000636662 IVLP07476 585 aa6.72□□□□□ -1.33
SCN2A-212ENST00000636662 KIF27Q86VH2 1401 aa6.72□□□□□ -1.33
SCN2A-212ENST00000636662 CCDC91Q7Z6B0 441 aa6.72□□□□□ -1.33
SCN2A-212ENST00000636662 KDM2AQ9Y2K7 1162 aa6.72□□□□□ -1.33
SCN2A-212ENST00000636662 PAK3O75914 559 aaPredicted RBP6.72□□□□□ -1.33
SCN2A-212ENST00000636662 SETSIPP0DME0 302 aa6.72□□□□□ -1.33
SCN2A-212ENST00000636662 LIG1P18858 919 aa6.72□□□□□ -1.33
SCN2A-212ENST00000636662 DAAM2Q86T65 1068 aa6.72□□□□□ -1.33
SCN2A-212ENST00000636662 MFAP1P55081 439 aaKnown RBP6.72□□□□□ -1.33
SCN2A-212ENST00000636662 TUBB4BP68371 445 aa6.72□□□□□ -1.33
SCN2A-212ENST00000636662 DHX29Q7Z478 1369 aaKnown RBP6.72□□□□□ -1.33
SCN2A-212ENST00000636662 GABPB1Q06547 395 aaPredicted RBP6.72□□□□□ -1.33
SCN2A-212ENST00000636662 SEPT6Q14141 434 aa6.72□□□□□ -1.33
SCN2A-212ENST00000636662 TAX1BP1Q86VP1 789 aa6.72□□□□□ -1.33
SCN2A-212ENST00000636662 ARID4AP29374 1257 aaPredicted RBP6.71□□□□□ -1.33
SCN2A-212ENST00000636662 BRD4O60885 1362 aaPredicted RBP6.71□□□□□ -1.33
SCN2A-212ENST00000636662 CCDC144AA2RUR9 1427 aa6.71□□□□□ -1.33
SCN2A-212ENST00000636662 PUS7Q96PZ0 661 aaKnown RBP6.71□□□□□ -1.34
SCN2A-212ENST00000636662 TCHPQ9BT92 498 aa6.71□□□□□ -1.34
SCN2A-212ENST00000636662 FBXW7Q969H0 707 aa6.71□□□□□ -1.34
SCN2A-212ENST00000636662 CHMP3Q9Y3E7 222 aa6.71□□□□□ -1.34
SCN2A-212ENST00000636662 V9GYY5 206 aaPredicted RBP6.71□□□□□ -1.34
SCN2A-212ENST00000636662 SENP3Q9H4L4 574 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms