RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 PCDHB3Q9Y5E6 796 aa10.47□□□□□ -0.73
CLN5-212ENST00000636602 OSBPP22059 807 aa10.46□□□□□ -0.73
CLN5-212ENST00000636602 PRR14Q9BWN1 585 aa10.46□□□□□ -0.73
CLN5-212ENST00000636602 SLC4A3P48751 1232 aa10.45□□□□□ -0.74
CLN5-212ENST00000636602 ANKLE1Q8NAG6 615 aa10.45□□□□□ -0.74
CLN5-212ENST00000636602 FAM187AA6NFU0 413 aa10.44□□□□□ -0.74
CLN5-212ENST00000636602 BLOC1S3Q6QNY0 202 aa10.44□□□□□ -0.74
CLN5-212ENST00000636602 GDF9O60383 454 aa10.43□□□□□ -0.74
CLN5-212ENST00000636602 ZNF697Q5TEC3 545 aa10.43□□□□□ -0.74
CLN5-212ENST00000636602 PADI6Q6TGC4 694 aa10.43□□□□□ -0.74
CLN5-212ENST00000636602 LIAT1Q6ZQX7 453 aa10.43□□□□□ -0.74
CLN5-212ENST00000636602 ARIH1Q9Y4X5 557 aaPredicted RBP10.42□□□□□ -0.74
CLN5-212ENST00000636602 PPEF1O14829 653 aaPredicted RBP10.41□□□□□ -0.74
CLN5-212ENST00000636602 TLL1O43897 1013 aa10.41□□□□□ -0.74
CLN5-212ENST00000636602 EYA1Q99502 592 aa10.41□□□□□ -0.74
CLN5-212ENST00000636602 NPDC1Q9NQX5 325 aaPredicted RBP10.41□□□□□ -0.74
CLN5-212ENST00000636602 TNFRSF10AO00220 468 aa10.4□□□□□ -0.74
CLN5-212ENST00000636602 AAASQ9NRG9 546 aa10.4□□□□□ -0.74
CLN5-212ENST00000636602 ST8SIA5O15466 376 aa10.39□□□□□ -0.75
CLN5-212ENST00000636602 S1PR4O95977 384 aa10.39□□□□□ -0.75
CLN5-212ENST00000636602 E2F4Q16254 413 aa10.39□□□□□ -0.75
CLN5-212ENST00000636602 ACTN4O43707 911 aaKnown RBP10.32□□□□□ -0.76
CLN5-212ENST00000636602 PLA2G2CQ5R387 149 aa10.31□□□□□ -0.76
CLN5-212ENST00000636602 WFS1O76024 890 aa10.3□□□□□ -0.76
CLN5-212ENST00000636602 ADH1BP00325 375 aa10.3□□□□□ -0.76
CLN5-212ENST00000636602 KMT5BQ4FZB7 885 aa10.3□□□□□ -0.76
CLN5-212ENST00000636602 DNAJB2P25686 324 aa10.29□□□□□ -0.76
CLN5-212ENST00000636602 CRIPAKQ8N1N5 446 aa10.29□□□□□ -0.76
CLN5-212ENST00000636602 PKD2L1Q9P0L9 805 aa10.29□□□□□ -0.76
CLN5-212ENST00000636602 STK17AQ9UEE5 414 aa10.28□□□□□ -0.76
CLN5-212ENST00000636602 DACH1Q9UI36 760 aa10.28□□□□□ -0.76
CLN5-212ENST00000636602 LMOD2Q6P5Q4 547 aa10.27□□□□□ -0.77
CLN5-212ENST00000636602 SLC6A16Q9GZN6 736 aa10.27□□□□□ -0.77
CLN5-212ENST00000636602 TMEM134Q9H6X4 195 aa10.27□□□□□ -0.77
CLN5-212ENST00000636602 FOXC1Q12948 553 aa10.26□□□□□ -0.77
CLN5-212ENST00000636602 NR1I2O75469 434 aa10.25□□□□□ -0.77
CLN5-212ENST00000636602 CFHP08603 1231 aa10.25□□□□□ -0.77
CLN5-212ENST00000636602 GMPR2Q9P2T1 348 aaKnown RBP10.25□□□□□ -0.77
CLN5-212ENST00000636602 AVPP01185 164 aa10.24□□□□□ -0.77
CLN5-212ENST00000636602 WDR70Q9NW82 654 aa10.24□□□□□ -0.77
CLN5-212ENST00000636602 C11orf95C9JLR9 678 aaPredicted RBP10.23□□□□□ -0.77
CLN5-212ENST00000636602 WIPF1O43516 503 aa10.23□□□□□ -0.77
CLN5-212ENST00000636602 NFX1Q12986 1120 aaKnown RBP10.23□□□□□ -0.77
CLN5-212ENST00000636602 BBXQ8WY36 941 aaPredicted RBP10.23□□□□□ -0.77
CLN5-212ENST00000636602 RBM46Q8TBY0 533 aaKnown RBP10.22□□□□□ -0.77
CLN5-212ENST00000636602 AXIN1O15169 862 aa10.21□□□□□ -0.77
CLN5-212ENST00000636602 INSM1Q01101 510 aaPredicted RBP10.21□□□□□ -0.77
CLN5-212ENST00000636602 TOR4AQ9NXH8 423 aa10.21□□□□□ -0.77
CLN5-212ENST00000636602 ADGRG1Q9Y653 693 aa10.2□□□□□ -0.78
CLN5-212ENST00000636602 RCCD1A6NED2 376 aa10.19□□□□□ -0.78
CLN5-212ENST00000636602 SLC10A3P09131 477 aa10.19□□□□□ -0.78
CLN5-212ENST00000636602 CTC1Q2NKJ3 1217 aa10.19□□□□□ -0.78
CLN5-212ENST00000636602 SCUBE3Q8IX30 993 aa10.19□□□□□ -0.78
CLN5-212ENST00000636602 RPIAP49247 311 aa10.18□□□□□ -0.78
CLN5-212ENST00000636602 SMCPP49901 116 aaPredicted RBP10.17□□□□□ -0.78
CLN5-212ENST00000636602 PTGDRQ13258 359 aa10.17□□□□□ -0.78
CLN5-212ENST00000636602 CYP4X1Q8N118 509 aa10.16□□□□□ -0.78
CLN5-212ENST00000636602 SPRYD3Q8NCJ5 442 aa10.16□□□□□ -0.78
CLN5-212ENST00000636602 SPSB2Q99619 263 aa10.16□□□□□ -0.78
CLN5-212ENST00000636602 CD2BP2O95400 341 aaKnown RBP10.14□□□□□ -0.79
CLN5-212ENST00000636602 PLCB2Q00722 1185 aa10.14□□□□□ -0.79
CLN5-212ENST00000636602 FAM161AQ3B820 660 aa10.13□□□□□ -0.79
CLN5-212ENST00000636602 PUS10Q3MIT2 529 aaKnown RBP10.13□□□□□ -0.79
CLN5-212ENST00000636602 LCE2CQ5TA81 110 aa10.12□□□□□ -0.79
CLN5-212ENST00000636602 MLLT3P42568 568 aaPredicted RBP10.11□□□□□ -0.79
CLN5-212ENST00000636602 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.1□□□□□ -0.79
CLN5-212ENST00000636602 FCF1Q9Y324 198 aaKnown RBP10.1□□□□□ -0.79
CLN5-212ENST00000636602 TERTO14746 1132 aaKnown RBP10.08□□□□□ -0.8
CLN5-212ENST00000636602 SNRPBP14678 240 aaKnown RBP10.07□□□□□ -0.8
CLN5-212ENST00000636602 ATP13A2Q9NQ11 1180 aa10.07□□□□□ -0.8
CLN5-212ENST00000636602 TTC24A2A3L6 582 aaPredicted RBP10.06□□□□□ -0.8
CLN5-212ENST00000636602 THAP11Q96EK4 314 aa10.05□□□□□ -0.8
CLN5-212ENST00000636602 RSPH4AQ5TD94 716 aa10.04□□□□□ -0.8
CLN5-212ENST00000636602 SMPD1P17405 629 aa10.03□□□□□ -0.8
CLN5-212ENST00000636602 HAP1P54257 671 aaPredicted RBP10.03□□□□□ -0.8
CLN5-212ENST00000636602 FAM160A2Q8N612 972 aaPredicted RBP10.03□□□□□ -0.8
CLN5-212ENST00000636602 TRIM47Q96LD4 638 aa10.03□□□□□ -0.8
CLN5-212ENST00000636602 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.03□□□□□ -0.8
CLN5-212ENST00000636602 LOC100996750A0A140TA64 210 aa10.02□□□□□ -0.81
CLN5-212ENST00000636602 MORN1Q5T089 497 aa10.02□□□□□ -0.81
CLN5-212ENST00000636602 PXYLP1Q8TE99 480 aa10.02□□□□□ -0.81
CLN5-212ENST00000636602 KRTAP4-6Q9BYQ5 205 aa10.02□□□□□ -0.81
CLN5-212ENST00000636602 SENP2Q9HC62 589 aa10.02□□□□□ -0.81
CLN5-212ENST00000636602 NUTM2FA1L443 756 aa10.01□□□□□ -0.81
CLN5-212ENST00000636602 SNIP1Q8TAD8 396 aaKnown RBP10.01□□□□□ -0.81
CLN5-212ENST00000636602 ZBTB24O43167 697 aaPredicted RBP10□□□□□ -0.81
CLN5-212ENST00000636602 OATP04181 439 aa10□□□□□ -0.81
CLN5-212ENST00000636602 WNT7AO00755 349 aa9.99□□□□□ -0.81
CLN5-212ENST00000636602 FMNL1O95466 1100 aaPredicted RBP9.99□□□□□ -0.81
CLN5-212ENST00000636602 ARHGEF1Q92888 912 aaKnown RBP9.99□□□□□ -0.81
CLN5-212ENST00000636602 PRDM9Q9NQV7 894 aa9.99□□□□□ -0.81
CLN5-212ENST00000636602 FAM181BA6NEQ2 426 aa9.98□□□□□ -0.81
CLN5-212ENST00000636602 FCHSD2O94868 740 aa9.98□□□□□ -0.81
CLN5-212ENST00000636602 FUT2Q10981 343 aa9.97□□□□□ -0.81
CLN5-212ENST00000636602 J3QL48 77 aa9.96□□□□□ -0.82
CLN5-212ENST00000636602 ATP6V1AP38606 617 aa9.96□□□□□ -0.82
CLN5-212ENST00000636602 PAXIP1Q6ZW49 1069 aaPredicted RBP9.96□□□□□ -0.82
CLN5-212ENST00000636602 KIFC2Q96AC6 838 aa9.96□□□□□ -0.82
CLN5-212ENST00000636602 CFAP44Q96MT7 982 aa9.96□□□□□ -0.82
CLN5-212ENST00000636602 SLC27A5Q9Y2P5 690 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms