RNA–Protein interactions for RNA: ENST00000636525.1

CLN5-211, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-211ENST00000636525 MRS2Q9HD23 443 aa25.2■■□□□ 1.62
CLN5-211ENST00000636525 PRKCSHP14314 528 aaPredicted RBP25.2■■□□□ 1.62
CLN5-211ENST00000636525 PPP4R2Q9NY27 417 aa25.2■■□□□ 1.62
CLN5-211ENST00000636525 MROH2AA6NES4 1674 aa25.19■■□□□ 1.62
CLN5-211ENST00000636525 CFAP70Q5T0N1 1121 aa25.18■■□□□ 1.62
CLN5-211ENST00000636525 FAM9BQ8IZU0 186 aa25.16■■□□□ 1.62
CLN5-211ENST00000636525 STAC3Q96MF2 364 aa25.16■■□□□ 1.62
CLN5-211ENST00000636525 KIF1BO60333 1816 aa25.16■■□□□ 1.62
CLN5-211ENST00000636525 COL17A1Q9UMD9 1497 aaPredicted RBP25.15■■□□□ 1.62
CLN5-211ENST00000636525 SIGLEC1Q9BZZ2 1709 aa25.14■■□□□ 1.62
CLN5-211ENST00000636525 NEURL4Q96JN8 1562 aa25.14■■□□□ 1.62
CLN5-211ENST00000636525 CAMSAP1Q5T5Y3 1602 aa25.14■■□□□ 1.61
CLN5-211ENST00000636525 ADGRB3O60242 1522 aa25.12■■□□□ 1.61
CLN5-211ENST00000636525 NOS1P29475 1434 aa25.12■■□□□ 1.61
CLN5-211ENST00000636525 ZMYM4Q5VZL5 1548 aa25.11■■□□□ 1.61
CLN5-211ENST00000636525 IQGAP1P46940 1657 aa25.1■■□□□ 1.61
CLN5-211ENST00000636525 MYOM2P54296 1465 aa25.1■■□□□ 1.61
CLN5-211ENST00000636525 TMF1P82094 1093 aa25.1■■□□□ 1.61
CLN5-211ENST00000636525 SCAF11Q99590 1463 aaKnown RBP25.09■■□□□ 1.61
CLN5-211ENST00000636525 NUTM2DQ5VT03 806 aaPredicted RBP25.08■■□□□ 1.61
CLN5-211ENST00000636525 IFT172Q9UG01 1749 aa25.08■■□□□ 1.61
CLN5-211ENST00000636525 PER1O15534 1290 aaPredicted RBP25.07■■□□□ 1.6
CLN5-211ENST00000636525 SYNMO15061 1565 aa25.07■■□□□ 1.6
CLN5-211ENST00000636525 KIF13AQ9H1H9 1805 aa25.05■■□□□ 1.6
CLN5-211ENST00000636525 IDI1Q13907 227 aa25.05■■□□□ 1.6
CLN5-211ENST00000636525 NOP58Q9Y2X3 529 aaKnown RBP25.05■■□□□ 1.6
CLN5-211ENST00000636525 NRXN1Q9ULB1 1477 aa25.05■■□□□ 1.6
CLN5-211ENST00000636525 PANK3Q9H999 370 aa25.04■■□□□ 1.6
CLN5-211ENST00000636525 FBXO31Q5XUX0 539 aaPredicted RBP25.04■■□□□ 1.6
CLN5-211ENST00000636525 ARHGAP31Q2M1Z3 1444 aa25.03■■□□□ 1.6
CLN5-211ENST00000636525 KIAA1210Q9ULL0 1709 aa25.01■■□□□ 1.59
CLN5-211ENST00000636525 SENP3Q9H4L4 574 aaPredicted RBP25.01■■□□□ 1.59
CLN5-211ENST00000636525 PIK3C2BO00750 1634 aa24.99■■□□□ 1.59
CLN5-211ENST00000636525 MLECQ14165 292 aa24.99■■□□□ 1.59
CLN5-211ENST00000636525 ZC3H13Q5T200 1668 aaKnown RBP24.98■■□□□ 1.59
CLN5-211ENST00000636525 PIK3C2GO75747 1445 aa24.98■■□□□ 1.59
CLN5-211ENST00000636525 TMEM132EQ6IEE7 984 aa24.98■■□□□ 1.59
CLN5-211ENST00000636525 PPLO60437 1756 aa24.98■■□□□ 1.59
CLN5-211ENST00000636525 B4GALNT3Q6L9W6 998 aa24.97■■□□□ 1.59
CLN5-211ENST00000636525 CC2D1BQ5T0F9 858 aaKnown RBP24.96■■□□□ 1.59
CLN5-211ENST00000636525 SENP3-EIF4A1A0A087X0R7 540 aa24.95■■□□□ 1.59
CLN5-211ENST00000636525 C14orf93Q9H972 538 aaKnown RBP24.95■■□□□ 1.59
CLN5-211ENST00000636525 TMC1Q8TDI8 760 aa24.94■■□□□ 1.58
CLN5-211ENST00000636525 EIF3AQ14152 1382 aaKnown RBP24.94■■□□□ 1.58
CLN5-211ENST00000636525 NBR1Q14596 966 aa24.94■■□□□ 1.58
CLN5-211ENST00000636525 RALBP1Q15311 655 aa24.94■■□□□ 1.58
CLN5-211ENST00000636525 PNISRQ8TF01 805 aaKnown RBP24.93■■□□□ 1.58
CLN5-211ENST00000636525 TRAK1Q9UPV9 953 aa24.93■■□□□ 1.58
CLN5-211ENST00000636525 RPGRIP1LQ68CZ1 1315 aa24.93■■□□□ 1.58
CLN5-211ENST00000636525 MYBBP1AQ9BQG0 1328 aaKnown RBP24.93■■□□□ 1.58
CLN5-211ENST00000636525 PARD3Q8TEW0 1356 aa24.92■■□□□ 1.58
CLN5-211ENST00000636525 SLC52A1Q9NWF4 448 aa24.92■■□□□ 1.58
CLN5-211ENST00000636525 KTN1Q86UP2 1357 aaKnown RBP24.92■■□□□ 1.58
CLN5-211ENST00000636525 PREX1Q8TCU6 1659 aa24.91■■□□□ 1.58
CLN5-211ENST00000636525 PAK3O75914 559 aaPredicted RBP24.91■■□□□ 1.58
CLN5-211ENST00000636525 NEXMIFQ5QGS0 1516 aa24.9■■□□□ 1.58
CLN5-211ENST00000636525 REREQ9P2R6 1566 aa24.89■■□□□ 1.58
CLN5-211ENST00000636525 AGLP35573 1532 aa24.89■■□□□ 1.58
CLN5-211ENST00000636525 ADGRB1O14514 1584 aa24.89■■□□□ 1.58
CLN5-211ENST00000636525 ERVK-7P63135 1459 aa24.88■■□□□ 1.57
CLN5-211ENST00000636525 VGFO15240 615 aaPredicted RBP24.87■■□□□ 1.57
CLN5-211ENST00000636525 ZBED9Q6R2W3 1325 aa24.86■■□□□ 1.57
CLN5-211ENST00000636525 CDCA8Q53HL2 280 aa24.86■■□□□ 1.57
CLN5-211ENST00000636525 SETBP1Q9Y6X0 1596 aa24.85■■□□□ 1.57
CLN5-211ENST00000636525 MYO5BQ9ULV0 1848 aa24.85■■□□□ 1.57
CLN5-211ENST00000636525 BRD4O60885 1362 aaPredicted RBP24.85■■□□□ 1.57
CLN5-211ENST00000636525 CLTCQ00610 1675 aaKnown RBP24.84■■□□□ 1.57
CLN5-211ENST00000636525 CENPJQ9HC77 1338 aaPredicted RBP24.84■■□□□ 1.57
CLN5-211ENST00000636525 TMEM131LA2VDJ0 1609 aa24.83■■□□□ 1.57
CLN5-211ENST00000636525 ARHGEF40Q8TER5 1519 aa24.83■■□□□ 1.57
CLN5-211ENST00000636525 NLRP13Q86W25 1043 aa24.83■■□□□ 1.57
CLN5-211ENST00000636525 MYOM1P52179 1685 aa24.82■■□□□ 1.56
CLN5-211ENST00000636525 KNSTRNQ9Y448 316 aa24.81■■□□□ 1.56
CLN5-211ENST00000636525 AMER1Q5JTC6 1135 aaPredicted RBP24.8■■□□□ 1.56
CLN5-211ENST00000636525 PPP6R1Q9UPN7 881 aa24.8■■□□□ 1.56
CLN5-211ENST00000636525 ANO8Q9HCE9 1232 aaPredicted RBP24.8■■□□□ 1.56
CLN5-211ENST00000636525 LRPPRCP42704 1394 aaKnown RBP24.79■■□□□ 1.56
CLN5-211ENST00000636525 IPO9Q96P70 1041 aaKnown RBP24.78■■□□□ 1.56
CLN5-211ENST00000636525 MYO3AQ8NEV4 1616 aa24.78■■□□□ 1.56
CLN5-211ENST00000636525 RTL5Q5HYW3 569 aaPredicted RBP24.78■■□□□ 1.56
CLN5-211ENST00000636525 ANP32AP39687 249 aaKnown RBP24.77■■□□□ 1.56
CLN5-211ENST00000636525 KDM5AP29375 1690 aaKnown RBP24.77■■□□□ 1.56
CLN5-211ENST00000636525 STAG3Q9UJ98 1225 aa24.76■■□□□ 1.55
CLN5-211ENST00000636525 SBNO2Q9Y2G9 1366 aa24.76■■□□□ 1.55
CLN5-211ENST00000636525 CARD14Q9BXL6 1004 aa24.75■■□□□ 1.55
CLN5-211ENST00000636525 STK26Q9P289 416 aa24.75■■□□□ 1.55
CLN5-211ENST00000636525 ZFYVE9O95405 1425 aa24.75■■□□□ 1.55
CLN5-211ENST00000636525 SAFB2Q14151 953 aaKnown RBP eCLIP24.74■■□□□ 1.55
CLN5-211ENST00000636525 ZMYM3Q14202 1370 aa24.72■■□□□ 1.55
CLN5-211ENST00000636525 ASXL1Q8IXJ9 1541 aa24.72■■□□□ 1.55
CLN5-211ENST00000636525 QRICH2Q9H0J4 1663 aa24.71■■□□□ 1.55
CLN5-211ENST00000636525 SLC24A1O60721 1099 aa24.71■■□□□ 1.55
CLN5-211ENST00000636525 ZBTB47Q9UFB7 747 aaPredicted RBP24.71■■□□□ 1.55
CLN5-211ENST00000636525 SPATA31D1Q6ZQQ2 1576 aa24.71■■□□□ 1.55
CLN5-211ENST00000636525 SLC12A5Q9H2X9 1139 aa24.7■■□□□ 1.54
CLN5-211ENST00000636525 PPP2R1AP30153 589 aa24.69■■□□□ 1.54
CLN5-211ENST00000636525 ESF1Q9H501 851 aaKnown RBP24.69■■□□□ 1.54
CLN5-211ENST00000636525 A2ML1A8K2U0 1454 aa24.68■■□□□ 1.54
CLN5-211ENST00000636525 ARHGEF28Q8N1W1 1705 aaKnown RBP24.67■■□□□ 1.54
CLN5-211ENST00000636525 SALL2Q9Y467 1007 aaPredicted RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms