RNA–Protein interactions for RNA: ENST00000636367.1

SMARCA2-250, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-250ENST00000636367 PRM3Q9NNZ6 103 aa11.57□□□□□ -0.56
SMARCA2-250ENST00000636367 TRIM35Q9UPQ4 493 aa11.57□□□□□ -0.56
SMARCA2-250ENST00000636367 TMEM121BQ9BXQ6 578 aaPredicted RBP11.56□□□□□ -0.56
SMARCA2-250ENST00000636367 USP17L8P0C7I0 530 aa11.55□□□□□ -0.56
SMARCA2-250ENST00000636367 LMOD1P29536 600 aaPredicted RBP11.55□□□□□ -0.56
SMARCA2-250ENST00000636367 IGSF5Q9NSI5 407 aa11.55□□□□□ -0.56
SMARCA2-250ENST00000636367 PADI6Q6TGC4 694 aa11.55□□□□□ -0.56
SMARCA2-250ENST00000636367 PALM3A6NDB9 673 aaPredicted RBP11.54□□□□□ -0.56
SMARCA2-250ENST00000636367 RSPH4AQ5TD94 716 aa11.54□□□□□ -0.56
SMARCA2-250ENST00000636367 ZNF710Q8N1W2 664 aa11.54□□□□□ -0.56
SMARCA2-250ENST00000636367 BMP2KQ9NSY1 1161 aaPredicted RBP11.54□□□□□ -0.56
SMARCA2-250ENST00000636367 BOLA1Q9Y3E2 137 aa11.54□□□□□ -0.56
SMARCA2-250ENST00000636367 ADGRG1Q9Y653 693 aa11.54□□□□□ -0.56
SMARCA2-250ENST00000636367 TIE1P35590 1138 aa11.53□□□□□ -0.56
SMARCA2-250ENST00000636367 RTL5Q5HYW3 569 aaPredicted RBP11.53□□□□□ -0.56
SMARCA2-250ENST00000636367 GJD4Q96KN9 370 aaPredicted RBP11.53□□□□□ -0.56
SMARCA2-250ENST00000636367 OATP04181 439 aa11.53□□□□□ -0.56
SMARCA2-250ENST00000636367 VAC14Q08AM6 782 aa11.53□□□□□ -0.56
SMARCA2-250ENST00000636367 DIXDC1Q155Q3 683 aa11.53□□□□□ -0.56
SMARCA2-250ENST00000636367 RSBN1LQ6PCB5 846 aaPredicted RBP11.52□□□□□ -0.57
SMARCA2-250ENST00000636367 GPR37L1O60883 481 aa11.51□□□□□ -0.57
SMARCA2-250ENST00000636367 MOXD2PA6NHM9 499 aa11.51□□□□□ -0.57
SMARCA2-250ENST00000636367 SOCS7O14512 581 aa11.51□□□□□ -0.57
SMARCA2-250ENST00000636367 FAM177A1Q8N128 213 aaPredicted RBP11.51□□□□□ -0.57
SMARCA2-250ENST00000636367 UCN2Q96RP3 112 aa11.51□□□□□ -0.57
SMARCA2-250ENST00000636367 KIAA1522Q9P206 1035 aaPredicted RBP11.51□□□□□ -0.57
SMARCA2-250ENST00000636367 PCDHB15Q9Y5E8 787 aa11.51□□□□□ -0.57
SMARCA2-250ENST00000636367 SPTLC1O15269 473 aa11.5□□□□□ -0.57
SMARCA2-250ENST00000636367 NDUFB9Q9Y6M9 179 aa11.5□□□□□ -0.57
SMARCA2-250ENST00000636367 NDUFV2P19404 249 aa11.49□□□□□ -0.57
SMARCA2-250ENST00000636367 RBM47A0AV96 593 aaKnown RBP11.49□□□□□ -0.57
SMARCA2-250ENST00000636367 PHF14O94880 888 aa11.49□□□□□ -0.57
SMARCA2-250ENST00000636367 CABLES1Q8TDN4 633 aa11.49□□□□□ -0.57
SMARCA2-250ENST00000636367 TFIP11Q9UBB9 837 aaKnown RBP11.49□□□□□ -0.57
SMARCA2-250ENST00000636367 LILRB3O75022 631 aa11.48□□□□□ -0.57
SMARCA2-250ENST00000636367 HMX1Q9NP08 348 aaPredicted RBP11.48□□□□□ -0.57
SMARCA2-250ENST00000636367 PCDHGA10Q9Y5H3 936 aa11.48□□□□□ -0.57
SMARCA2-250ENST00000636367 EPAS1Q99814 870 aa11.47□□□□□ -0.57
SMARCA2-250ENST00000636367 ANO8Q9HCE9 1232 aaPredicted RBP11.46□□□□□ -0.57
SMARCA2-250ENST00000636367 TUSC1Q2TAM9 212 aa11.46□□□□□ -0.58
SMARCA2-250ENST00000636367 MRRFQ96E11 262 aaKnown RBP11.46□□□□□ -0.58
SMARCA2-250ENST00000636367 TXNDC2Q86VQ3 553 aa11.45□□□□□ -0.58
SMARCA2-250ENST00000636367 PELP1Q8IZL8 1130 aaKnown RBP11.45□□□□□ -0.58
SMARCA2-250ENST00000636367 GNEQ9Y223 722 aaKnown RBP11.45□□□□□ -0.58
SMARCA2-250ENST00000636367 ATG7O95352 703 aa11.44□□□□□ -0.58
SMARCA2-250ENST00000636367 ALG2Q9H553 416 aa11.44□□□□□ -0.58
SMARCA2-250ENST00000636367 EIF4G1Q04637 1599 aaKnown RBP11.44□□□□□ -0.58
SMARCA2-250ENST00000636367 G3V3G9 751 aa11.44□□□□□ -0.58
SMARCA2-250ENST00000636367 SLAIN1Q8ND83 568 aa11.44□□□□□ -0.58
SMARCA2-250ENST00000636367 NUTM2BA6NNL0 878 aaPredicted RBP11.43□□□□□ -0.58
SMARCA2-250ENST00000636367 NUTM2EB1AL46 878 aaPredicted RBP11.43□□□□□ -0.58
SMARCA2-250ENST00000636367 WASHC4Q2M389 1173 aa11.43□□□□□ -0.58
SMARCA2-250ENST00000636367 NUTM2DQ5VT03 806 aaPredicted RBP11.43□□□□□ -0.58
SMARCA2-250ENST00000636367 NUTM2AQ8IVF1 878 aaPredicted RBP11.43□□□□□ -0.58
SMARCA2-250ENST00000636367 CD46P15529 392 aa11.42□□□□□ -0.58
SMARCA2-250ENST00000636367 NUTM1Q86Y26 1132 aa11.42□□□□□ -0.58
SMARCA2-250ENST00000636367 PRR7Q8TB68 274 aa11.42□□□□□ -0.58
SMARCA2-250ENST00000636367 TRIM34Q9BYJ4 488 aa11.42□□□□□ -0.58
SMARCA2-250ENST00000636367 PTCD2Q8WV60 388 aaKnown RBP11.41□□□□□ -0.58
SMARCA2-250ENST00000636367 CECR2Q9BXF3 1484 aa11.41□□□□□ -0.58
SMARCA2-250ENST00000636367 MAFBQ9Y5Q3 323 aaPredicted RBP11.4□□□□□ -0.58
SMARCA2-250ENST00000636367 NOM1Q5C9Z4 860 aaKnown RBP11.4□□□□□ -0.59
SMARCA2-250ENST00000636367 IRX5P78411 483 aaPredicted RBP11.39□□□□□ -0.59
SMARCA2-250ENST00000636367 DNAJC14Q6Y2X3 702 aaPredicted RBP11.39□□□□□ -0.59
SMARCA2-250ENST00000636367 PIP4P2Q8N4L2 257 aa11.39□□□□□ -0.59
SMARCA2-250ENST00000636367 TYW1BQ6NUM6 668 aa11.38□□□□□ -0.59
SMARCA2-250ENST00000636367 TBC1D9Q6ZT07 1266 aa11.38□□□□□ -0.59
SMARCA2-250ENST00000636367 CC2D2AQ9P2K1 1620 aa11.38□□□□□ -0.59
SMARCA2-250ENST00000636367 CTDSPL2Q05D32 466 aa11.37□□□□□ -0.59
SMARCA2-250ENST00000636367 TTC13Q8NBP0 860 aa11.37□□□□□ -0.59
SMARCA2-250ENST00000636367 PHLDB3Q6NSJ2 640 aa11.36□□□□□ -0.59
SMARCA2-250ENST00000636367 EPS8L1Q8TE68 723 aa11.36□□□□□ -0.59
SMARCA2-250ENST00000636367 STK32AQ8WU08 396 aa11.36□□□□□ -0.59
SMARCA2-250ENST00000636367 CHMP4AQ9BY43 222 aa11.36□□□□□ -0.59
SMARCA2-250ENST00000636367 ZMIZ1Q9ULJ6 1067 aa11.36□□□□□ -0.59
SMARCA2-250ENST00000636367 DDX11L8A8MPP1 907 aa11.35□□□□□ -0.59
SMARCA2-250ENST00000636367 ZNF16P17020 682 aaPredicted RBP11.35□□□□□ -0.59
SMARCA2-250ENST00000636367 TMEM164Q5U3C3 297 aa11.35□□□□□ -0.59
SMARCA2-250ENST00000636367 OCEL1Q9H607 264 aa11.35□□□□□ -0.59
SMARCA2-250ENST00000636367 EIF5BO60841 1220 aaKnown RBP11.34□□□□□ -0.59
SMARCA2-250ENST00000636367 RBM46Q8TBY0 533 aaKnown RBP11.34□□□□□ -0.59
SMARCA2-250ENST00000636367 LRRN4Q8WUT4 740 aa11.34□□□□□ -0.59
SMARCA2-250ENST00000636367 RCCD1A6NED2 376 aa11.33□□□□□ -0.6
SMARCA2-250ENST00000636367 CCER1Q8TC90 406 aaPredicted RBP11.32□□□□□ -0.6
SMARCA2-250ENST00000636367 C6orf132Q5T0Z8 1188 aa11.32□□□□□ -0.6
SMARCA2-250ENST00000636367 L3MBTL3Q96JM7 780 aaPredicted RBP11.32□□□□□ -0.6
SMARCA2-250ENST00000636367 SMARCA4P51532 1647 aa11.31□□□□□ -0.6
SMARCA2-250ENST00000636367 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
SMARCA2-250ENST00000636367 B4GALNT3Q6L9W6 998 aa11.31□□□□□ -0.6
SMARCA2-250ENST00000636367 BCL2L13Q9BXK5 485 aa11.31□□□□□ -0.6
SMARCA2-250ENST00000636367 CCDC125Q86Z20 511 aa11.3□□□□□ -0.6
SMARCA2-250ENST00000636367 TSC1Q92574 1164 aa11.3□□□□□ -0.6
SMARCA2-250ENST00000636367 BAZ1AQ9NRL2 1556 aaPredicted RBP11.3□□□□□ -0.6
SMARCA2-250ENST00000636367 GALR2O43603 387 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-250ENST00000636367 TCF3P15923 654 aa11.29□□□□□ -0.6
SMARCA2-250ENST00000636367 GIPC2Q8TF65 315 aa11.29□□□□□ -0.6
SMARCA2-250ENST00000636367 MROH2BQ7Z745 1585 aa11.29□□□□□ -0.6
SMARCA2-250ENST00000636367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.29□□□□□ -0.6
SMARCA2-250ENST00000636367 GJA5P36382 358 aa11.29□□□□□ -0.6
SMARCA2-250ENST00000636367 ZBTB3Q9H5J0 574 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms