RNA–Protein interactions for RNA: ENST00000636241.1

CLCN2-211, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 2,010 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-211ENST00000636241 WASHC2CQ9Y4E1 1318 aa23.29■■□□□ 1.32
CLCN2-211ENST00000636241 PIK3C2BO00750 1634 aa23.29■■□□□ 1.32
CLCN2-211ENST00000636241 ARHGAP31Q2M1Z3 1444 aa23.28■■□□□ 1.32
CLCN2-211ENST00000636241 PPLO60437 1756 aa23.27■■□□□ 1.32
CLCN2-211ENST00000636241 TMF1P82094 1093 aa23.26■■□□□ 1.31
CLCN2-211ENST00000636241 SYNMO15061 1565 aa23.26■■□□□ 1.31
CLCN2-211ENST00000636241 TSPOAP1O95153 1857 aa23.25■■□□□ 1.31
CLCN2-211ENST00000636241 REREQ9P2R6 1566 aa23.25■■□□□ 1.31
CLCN2-211ENST00000636241 EIF3AQ14152 1382 aaKnown RBP23.24■■□□□ 1.31
CLCN2-211ENST00000636241 ADGRF5Q8IZF2 1346 aa23.24■■□□□ 1.31
CLCN2-211ENST00000636241 SETBP1Q9Y6X0 1596 aa23.22■■□□□ 1.31
CLCN2-211ENST00000636241 FAM9BQ8IZU0 186 aa23.22■■□□□ 1.31
CLCN2-211ENST00000636241 CFAP65Q6ZU64 1925 aaKnown RBP23.22■■□□□ 1.31
CLCN2-211ENST00000636241 RALBP1Q15311 655 aa23.21■■□□□ 1.31
CLCN2-211ENST00000636241 PARD3Q8TEW0 1356 aa23.2■■□□□ 1.3
CLCN2-211ENST00000636241 MYO3AQ8NEV4 1616 aa23.19■■□□□ 1.3
CLCN2-211ENST00000636241 PIK3C2GO75747 1445 aa23.19■■□□□ 1.3
CLCN2-211ENST00000636241 PER1O15534 1290 aaPredicted RBP23.19■■□□□ 1.3
CLCN2-211ENST00000636241 MYBBP1AQ9BQG0 1328 aaKnown RBP23.19■■□□□ 1.3
CLCN2-211ENST00000636241 KIF13AQ9H1H9 1805 aa23.18■■□□□ 1.3
CLCN2-211ENST00000636241 AGLP35573 1532 aa23.17■■□□□ 1.3
CLCN2-211ENST00000636241 BRD4O60885 1362 aaPredicted RBP23.17■■□□□ 1.3
CLCN2-211ENST00000636241 CFAP70Q5T0N1 1121 aa23.17■■□□□ 1.3
CLCN2-211ENST00000636241 ZBED9Q6R2W3 1325 aa23.17■■□□□ 1.3
CLCN2-211ENST00000636241 RPGRIP1LQ68CZ1 1315 aa23.16■■□□□ 1.3
CLCN2-211ENST00000636241 PREX1Q8TCU6 1659 aa23.16■■□□□ 1.3
CLCN2-211ENST00000636241 CNGB1Q14028 1251 aaPredicted RBP23.16■■□□□ 1.3
CLCN2-211ENST00000636241 MYOM1P52179 1685 aa23.15■■□□□ 1.3
CLCN2-211ENST00000636241 NEXMIFQ5QGS0 1516 aa23.14■■□□□ 1.3
CLCN2-211ENST00000636241 CHGAP10645 457 aaKnown RBP23.13■■□□□ 1.29
CLCN2-211ENST00000636241 CDCA8Q53HL2 280 aa23.13■■□□□ 1.29
CLCN2-211ENST00000636241 KDM5AP29375 1690 aaKnown RBP23.13■■□□□ 1.29
CLCN2-211ENST00000636241 ADGRB1O14514 1584 aa23.13■■□□□ 1.29
CLCN2-211ENST00000636241 PANK3Q9H999 370 aa23.11■■□□□ 1.29
CLCN2-211ENST00000636241 SBNO2Q9Y2G9 1366 aa23.11■■□□□ 1.29
CLCN2-211ENST00000636241 PNISRQ8TF01 805 aaKnown RBP23.1■■□□□ 1.29
CLCN2-211ENST00000636241 ARHGEF40Q8TER5 1519 aa23.1■■□□□ 1.29
CLCN2-211ENST00000636241 LRPPRCP42704 1394 aaKnown RBP23.1■■□□□ 1.29
CLCN2-211ENST00000636241 TMC1Q8TDI8 760 aa23.09■■□□□ 1.29
CLCN2-211ENST00000636241 ERVK-7P63135 1459 aa23.09■■□□□ 1.29
CLCN2-211ENST00000636241 SLC24A1O60721 1099 aa23.08■■□□□ 1.28
CLCN2-211ENST00000636241 NLRP13Q86W25 1043 aa23.08■■□□□ 1.28
CLCN2-211ENST00000636241 C14orf93Q9H972 538 aaKnown RBP23.07■■□□□ 1.28
CLCN2-211ENST00000636241 SLC52A1Q9NWF4 448 aa23.06■■□□□ 1.28
CLCN2-211ENST00000636241 TMEM131LA2VDJ0 1609 aa23.06■■□□□ 1.28
CLCN2-211ENST00000636241 NEFLP07196 543 aa23.06■■□□□ 1.28
CLCN2-211ENST00000636241 FKBP8Q14318 412 aa23.05■■□□□ 1.28
CLCN2-211ENST00000636241 ZFYVE9O95405 1425 aa23.04■■□□□ 1.28
CLCN2-211ENST00000636241 IDI1Q13907 227 aa23.03■■□□□ 1.28
CLCN2-211ENST00000636241 PPP6R1Q9UPN7 881 aa23.03■■□□□ 1.28
CLCN2-211ENST00000636241 MYO5BQ9ULV0 1848 aa23.03■■□□□ 1.28
CLCN2-211ENST00000636241 QRICH2Q9H0J4 1663 aa23.02■■□□□ 1.28
CLCN2-211ENST00000636241 CLTCQ00610 1675 aaKnown RBP23.01■■□□□ 1.27
CLCN2-211ENST00000636241 TRHP20396 242 aaPredicted RBP23.01■■□□□ 1.27
CLCN2-211ENST00000636241 ASXL1Q8IXJ9 1541 aa23■■□□□ 1.27
CLCN2-211ENST00000636241 VGFO15240 615 aaPredicted RBP22.99■■□□□ 1.27
CLCN2-211ENST00000636241 CC2D1BQ5T0F9 858 aaKnown RBP22.99■■□□□ 1.27
CLCN2-211ENST00000636241 CENPJQ9HC77 1338 aaPredicted RBP22.99■■□□□ 1.27
CLCN2-211ENST00000636241 SPATA31D1Q6ZQQ2 1576 aa22.98■■□□□ 1.27
CLCN2-211ENST00000636241 ARHGEF28Q8N1W1 1705 aaKnown RBP22.98■■□□□ 1.27
CLCN2-211ENST00000636241 NPC1L1Q9UHC9 1359 aa22.97■■□□□ 1.27
CLCN2-211ENST00000636241 AMER1Q5JTC6 1135 aaPredicted RBP22.96■■□□□ 1.27
CLCN2-211ENST00000636241 KNSTRNQ9Y448 316 aa22.96■■□□□ 1.27
CLCN2-211ENST00000636241 SMG6Q86US8 1419 aaKnown RBP22.95■■□□□ 1.26
CLCN2-211ENST00000636241 INSRP06213 1382 aa22.95■■□□□ 1.26
CLCN2-211ENST00000636241 FBXO31Q5XUX0 539 aaPredicted RBP22.92■■□□□ 1.26
CLCN2-211ENST00000636241 TRAK1Q9UPV9 953 aa22.92■■□□□ 1.26
CLCN2-211ENST00000636241 TMEM132EQ6IEE7 984 aa22.91■■□□□ 1.26
CLCN2-211ENST00000636241 NUTM2DQ5VT03 806 aaPredicted RBP22.9■■□□□ 1.26
CLCN2-211ENST00000636241 BCANQ96GW7 911 aa22.89■■□□□ 1.26
CLCN2-211ENST00000636241 BLMP54132 1417 aaPredicted RBP22.88■■□□□ 1.25
CLCN2-211ENST00000636241 TULP4Q9NRJ4 1543 aa22.86■■□□□ 1.25
CLCN2-211ENST00000636241 MYT1Q01538 1121 aa22.86■■□□□ 1.25
CLCN2-211ENST00000636241 NUDCQ9Y266 331 aa22.86■■□□□ 1.25
CLCN2-211ENST00000636241 PPP2R1AP30153 589 aa22.85■■□□□ 1.25
CLCN2-211ENST00000636241 A2ML1A8K2U0 1454 aa22.85■■□□□ 1.25
CLCN2-211ENST00000636241 TSHZ2Q9NRE2 1034 aa22.84■■□□□ 1.25
CLCN2-211ENST00000636241 USP32Q8NFA0 1604 aa22.82■■□□□ 1.24
CLCN2-211ENST00000636241 ALKQ9UM73 1620 aa22.82■■□□□ 1.24
CLCN2-211ENST00000636241 PUS7Q96PZ0 661 aaKnown RBP22.82■■□□□ 1.24
CLCN2-211ENST00000636241 PTPRMP28827 1452 aa22.82■■□□□ 1.24
CLCN2-211ENST00000636241 ERICH6BQ5W0A0 696 aa22.81■■□□□ 1.24
CLCN2-211ENST00000636241 CARD14Q9BXL6 1004 aa22.81■■□□□ 1.24
CLCN2-211ENST00000636241 MLECQ14165 292 aa22.81■■□□□ 1.24
CLCN2-211ENST00000636241 YTHDC2Q9H6S0 1430 aaKnown RBP22.78■■□□□ 1.24
CLCN2-211ENST00000636241 EVC2Q86UK5 1308 aa22.77■■□□□ 1.24
CLCN2-211ENST00000636241 SETD1AO15047 1707 aaKnown RBP22.77■■□□□ 1.24
CLCN2-211ENST00000636241 STAG3Q9UJ98 1225 aa22.77■■□□□ 1.24
CLCN2-211ENST00000636241 NSD3Q9BZ95 1437 aa22.77■■□□□ 1.23
CLCN2-211ENST00000636241 ZMYM3Q14202 1370 aa22.76■■□□□ 1.23
CLCN2-211ENST00000636241 RIMS2Q9UQ26 1411 aa22.76■■□□□ 1.23
CLCN2-211ENST00000636241 IRX6P78412 446 aaPredicted RBP22.75■■□□□ 1.23
CLCN2-211ENST00000636241 RNF123Q5XPI4 1314 aa22.74■■□□□ 1.23
CLCN2-211ENST00000636241 SENP3-EIF4A1A0A087X0R7 540 aa22.74■■□□□ 1.23
CLCN2-211ENST00000636241 SLC12A5Q9H2X9 1139 aa22.72■■□□□ 1.23
CLCN2-211ENST00000636241 DLC1Q96QB1 1528 aa22.72■■□□□ 1.23
CLCN2-211ENST00000636241 PDE3BQ13370 1112 aa22.72■■□□□ 1.23
CLCN2-211ENST00000636241 ANKRD36BQ8N2N9 1353 aa22.71■■□□□ 1.23
CLCN2-211ENST00000636241 ESF1Q9H501 851 aaKnown RBP22.71■■□□□ 1.23
CLCN2-211ENST00000636241 NRXN3Q9Y4C0 1643 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms