RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 HNRNPUQ00839 825 aaKnown RBP eCLIP24.63■■□□□ 1.53
CLN5-206ENST00000635915 SYNMO15061 1565 aa24.62■■□□□ 1.53
CLN5-206ENST00000635915 SCAF11Q99590 1463 aaKnown RBP24.62■■□□□ 1.53
CLN5-206ENST00000635915 TMF1P82094 1093 aa24.62■■□□□ 1.53
CLN5-206ENST00000635915 ZC3H13Q5T200 1668 aaKnown RBP24.6■■□□□ 1.53
CLN5-206ENST00000635915 ARHGAP31Q2M1Z3 1444 aa24.59■■□□□ 1.53
CLN5-206ENST00000635915 NUTM2DQ5VT03 806 aaPredicted RBP24.59■■□□□ 1.53
CLN5-206ENST00000635915 KIAA1210Q9ULL0 1709 aa24.58■■□□□ 1.53
CLN5-206ENST00000635915 NRXN1Q9ULB1 1477 aa24.57■■□□□ 1.52
CLN5-206ENST00000635915 IDI1Q13907 227 aa24.57■■□□□ 1.52
CLN5-206ENST00000635915 PPLO60437 1756 aa24.56■■□□□ 1.52
CLN5-206ENST00000635915 PIK3C2BO00750 1634 aa24.56■■□□□ 1.52
CLN5-206ENST00000635915 FBXO31Q5XUX0 539 aaPredicted RBP24.56■■□□□ 1.52
CLN5-206ENST00000635915 MLECQ14165 292 aa24.55■■□□□ 1.52
CLN5-206ENST00000635915 PANK3Q9H999 370 aa24.53■■□□□ 1.52
CLN5-206ENST00000635915 PER1O15534 1290 aaPredicted RBP24.53■■□□□ 1.52
CLN5-206ENST00000635915 SENP3Q9H4L4 574 aaPredicted RBP24.52■■□□□ 1.52
CLN5-206ENST00000635915 PIK3C2GO75747 1445 aa24.51■■□□□ 1.51
CLN5-206ENST00000635915 PREX1Q8TCU6 1659 aa24.51■■□□□ 1.51
CLN5-206ENST00000635915 EIF3AQ14152 1382 aaKnown RBP24.51■■□□□ 1.51
CLN5-206ENST00000635915 REREQ9P2R6 1566 aa24.49■■□□□ 1.51
CLN5-206ENST00000635915 RPGRIP1LQ68CZ1 1315 aa24.49■■□□□ 1.51
CLN5-206ENST00000635915 TMEM132EQ6IEE7 984 aa24.49■■□□□ 1.51
CLN5-206ENST00000635915 AGLP35573 1532 aa24.48■■□□□ 1.51
CLN5-206ENST00000635915 SLC52A1Q9NWF4 448 aa24.48■■□□□ 1.51
CLN5-206ENST00000635915 C14orf93Q9H972 538 aaKnown RBP24.47■■□□□ 1.51
CLN5-206ENST00000635915 MYO5BQ9ULV0 1848 aa24.46■■□□□ 1.51
CLN5-206ENST00000635915 NEXMIFQ5QGS0 1516 aa24.46■■□□□ 1.51
CLN5-206ENST00000635915 ARHGEF40Q8TER5 1519 aa24.46■■□□□ 1.51
CLN5-206ENST00000635915 CC2D1BQ5T0F9 858 aaKnown RBP24.45■■□□□ 1.51
CLN5-206ENST00000635915 TRAK1Q9UPV9 953 aa24.45■■□□□ 1.51
CLN5-206ENST00000635915 RALBP1Q15311 655 aa24.44■■□□□ 1.5
CLN5-206ENST00000635915 TMC1Q8TDI8 760 aa24.44■■□□□ 1.5
CLN5-206ENST00000635915 CLTCQ00610 1675 aaKnown RBP24.44■■□□□ 1.5
CLN5-206ENST00000635915 KTN1Q86UP2 1357 aaKnown RBP24.44■■□□□ 1.5
CLN5-206ENST00000635915 MYBBP1AQ9BQG0 1328 aaKnown RBP24.44■■□□□ 1.5
CLN5-206ENST00000635915 ERVK-7P63135 1459 aa24.43■■□□□ 1.5
CLN5-206ENST00000635915 VGFO15240 615 aaPredicted RBP24.42■■□□□ 1.5
CLN5-206ENST00000635915 ADGRB1O14514 1584 aa24.42■■□□□ 1.5
CLN5-206ENST00000635915 SUPT16HQ9Y5B9 1047 aaKnown RBP24.41■■□□□ 1.5
CLN5-206ENST00000635915 PARD3Q8TEW0 1356 aa24.41■■□□□ 1.5
CLN5-206ENST00000635915 SETBP1Q9Y6X0 1596 aa24.41■■□□□ 1.5
CLN5-206ENST00000635915 CDCA8Q53HL2 280 aa24.4■■□□□ 1.5
CLN5-206ENST00000635915 TMEM131LA2VDJ0 1609 aa24.4■■□□□ 1.5
CLN5-206ENST00000635915 SENP3-EIF4A1A0A087X0R7 540 aa24.39■■□□□ 1.49
CLN5-206ENST00000635915 PNISRQ8TF01 805 aaKnown RBP24.39■■□□□ 1.49
CLN5-206ENST00000635915 PPP6R1Q9UPN7 881 aa24.38■■□□□ 1.49
CLN5-206ENST00000635915 CENPJQ9HC77 1338 aaPredicted RBP24.38■■□□□ 1.49
CLN5-206ENST00000635915 MYOM1P52179 1685 aa24.36■■□□□ 1.49
CLN5-206ENST00000635915 BRD4O60885 1362 aaPredicted RBP24.36■■□□□ 1.49
CLN5-206ENST00000635915 KDM5AP29375 1690 aaKnown RBP24.35■■□□□ 1.49
CLN5-206ENST00000635915 STAG3Q9UJ98 1225 aa24.34■■□□□ 1.49
CLN5-206ENST00000635915 MYO3AQ8NEV4 1616 aa24.34■■□□□ 1.49
CLN5-206ENST00000635915 NLRP13Q86W25 1043 aa24.33■■□□□ 1.49
CLN5-206ENST00000635915 KNSTRNQ9Y448 316 aa24.33■■□□□ 1.49
CLN5-206ENST00000635915 ZBED9Q6R2W3 1325 aa24.33■■□□□ 1.49
CLN5-206ENST00000635915 FKBP8Q14318 412 aa24.3■■□□□ 1.48
CLN5-206ENST00000635915 ESF1Q9H501 851 aaKnown RBP24.3■■□□□ 1.48
CLN5-206ENST00000635915 SBNO2Q9Y2G9 1366 aa24.3■■□□□ 1.48
CLN5-206ENST00000635915 ZFYVE9O95405 1425 aa24.3■■□□□ 1.48
CLN5-206ENST00000635915 QRICH2Q9H0J4 1663 aa24.3■■□□□ 1.48
CLN5-206ENST00000635915 AMER1Q5JTC6 1135 aaPredicted RBP24.29■■□□□ 1.48
CLN5-206ENST00000635915 STK26Q9P289 416 aa24.29■■□□□ 1.48
CLN5-206ENST00000635915 SPATA31D1Q6ZQQ2 1576 aa24.29■■□□□ 1.48
CLN5-206ENST00000635915 SLC24A1O60721 1099 aa24.27■■□□□ 1.48
CLN5-206ENST00000635915 SAFB2Q14151 953 aaKnown RBP eCLIP24.27■■□□□ 1.48
CLN5-206ENST00000635915 ZMYM3Q14202 1370 aa24.27■■□□□ 1.48
CLN5-206ENST00000635915 ASXL1Q8IXJ9 1541 aa24.26■■□□□ 1.47
CLN5-206ENST00000635915 LRPPRCP42704 1394 aaKnown RBP24.26■■□□□ 1.47
CLN5-206ENST00000635915 TRHP20396 242 aaPredicted RBP24.24■■□□□ 1.47
CLN5-206ENST00000635915 BCANQ96GW7 911 aa24.24■■□□□ 1.47
CLN5-206ENST00000635915 ARHGEF28Q8N1W1 1705 aaKnown RBP24.24■■□□□ 1.47
CLN5-206ENST00000635915 A2ML1A8K2U0 1454 aa24.24■■□□□ 1.47
CLN5-206ENST00000635915 CARD14Q9BXL6 1004 aa24.23■■□□□ 1.47
CLN5-206ENST00000635915 NEFLP07196 543 aa24.21■■□□□ 1.47
CLN5-206ENST00000635915 SLC12A5Q9H2X9 1139 aa24.2■■□□□ 1.46
CLN5-206ENST00000635915 PPP2R1AP30153 589 aa24.18■■□□□ 1.46
CLN5-206ENST00000635915 RIMS2Q9UQ26 1411 aa24.18■■□□□ 1.46
CLN5-206ENST00000635915 ALKQ9UM73 1620 aa24.17■■□□□ 1.46
CLN5-206ENST00000635915 TULP4Q9NRJ4 1543 aa24.16■■□□□ 1.46
CLN5-206ENST00000635915 YTHDC2Q9H6S0 1430 aaKnown RBP24.15■■□□□ 1.46
CLN5-206ENST00000635915 IRX6P78412 446 aaPredicted RBP24.15■■□□□ 1.46
CLN5-206ENST00000635915 CABP2Q9NPB3 220 aa24.14■■□□□ 1.46
CLN5-206ENST00000635915 EVC2Q86UK5 1308 aa24.14■■□□□ 1.45
CLN5-206ENST00000635915 PRAM1Q96QH2 718 aa24.14■■□□□ 1.45
CLN5-206ENST00000635915 SALL2Q9Y467 1007 aaPredicted RBP24.14■■□□□ 1.45
CLN5-206ENST00000635915 PTPRMP28827 1452 aa24.13■■□□□ 1.45
CLN5-206ENST00000635915 TNRQ92752 1358 aa24.13■■□□□ 1.45
CLN5-206ENST00000635915 NPC1L1Q9UHC9 1359 aa24.12■■□□□ 1.45
CLN5-206ENST00000635915 CEBPAP49715 358 aaPredicted RBP24.12■■□□□ 1.45
CLN5-206ENST00000635915 MINK1Q8N4C8 1332 aaPredicted RBP24.12■■□□□ 1.45
CLN5-206ENST00000635915 PLPPR3Q6T4P5 718 aa24.11■■□□□ 1.45
CLN5-206ENST00000635915 POGKQ9P215 609 aa24.1■■□□□ 1.45
CLN5-206ENST00000635915 NSD3Q9BZ95 1437 aa24.1■■□□□ 1.45
CLN5-206ENST00000635915 SRPK2P78362 688 aaKnown RBP24.07■■□□□ 1.44
CLN5-206ENST00000635915 ADAMTS8Q9UP79 889 aa24.06■■□□□ 1.44
CLN5-206ENST00000635915 SMG6Q86US8 1419 aaKnown RBP24.06■■□□□ 1.44
CLN5-206ENST00000635915 NUDCQ9Y266 331 aa24.04■■□□□ 1.44
CLN5-206ENST00000635915 WAPLQ7Z5K2 1190 aa24.04■■□□□ 1.44
CLN5-206ENST00000635915 SETD1AO15047 1707 aaKnown RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms