RNA–Protein interactions for RNA: ENST00000635832.1

GABRB3-217, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-217ENST00000635832 ATF3P18847 181 aa11.85□□□□□ -0.51
GABRB3-217ENST00000635832 CT47A1Q5JQC4 288 aaPredicted RBP11.85□□□□□ -0.51
GABRB3-217ENST00000635832 NFXL1Q6ZNB6 911 aa11.85□□□□□ -0.51
GABRB3-217ENST00000635832 G3BP1Q13283 466 aaKnown RBP eCLIP11.85□□□□□ -0.51
GABRB3-217ENST00000635832 ROCK1Q13464 1354 aa11.84□□□□□ -0.51
GABRB3-217ENST00000635832 CDR1P51861 262 aa11.84□□□□□ -0.51
GABRB3-217ENST00000635832 SAFBQ15424 915 aaKnown RBP eCLIP11.84□□□□□ -0.51
GABRB3-217ENST00000635832 CCAR2Q8N163 923 aaKnown RBP11.84□□□□□ -0.51
GABRB3-217ENST00000635832 EIF2S2P20042 333 aaKnown RBP11.84□□□□□ -0.51
GABRB3-217ENST00000635832 HSP90AB4PQ58FF6 505 aa11.84□□□□□ -0.51
GABRB3-217ENST00000635832 ZKSCAN2Q63HK3 967 aa11.84□□□□□ -0.51
GABRB3-217ENST00000635832 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
GABRB3-217ENST00000635832 REC8O95072 547 aa11.84□□□□□ -0.51
GABRB3-217ENST00000635832 RAPGEF4Q8WZA2 1011 aa11.84□□□□□ -0.51
GABRB3-217ENST00000635832 RDXP35241 583 aaKnown RBP11.83□□□□□ -0.52
GABRB3-217ENST00000635832 DEKP35659 375 aaKnown RBP11.83□□□□□ -0.52
GABRB3-217ENST00000635832 SKOR2Q2VWA4 1001 aaPredicted RBP11.83□□□□□ -0.52
GABRB3-217ENST00000635832 ANKRD45Q5TZF3 282 aa11.83□□□□□ -0.52
GABRB3-217ENST00000635832 KIF15Q9NS87 1388 aa11.83□□□□□ -0.52
GABRB3-217ENST00000635832 CCAR1Q8IX12 1150 aaKnown RBP11.83□□□□□ -0.52
GABRB3-217ENST00000635832 API5Q9BZZ5 524 aaKnown RBP11.82□□□□□ -0.52
GABRB3-217ENST00000635832 CCDC144AA2RUR9 1427 aa11.82□□□□□ -0.52
GABRB3-217ENST00000635832 BRMS1Q9HCU9 246 aa11.82□□□□□ -0.52
GABRB3-217ENST00000635832 VPS8Q8N3P4 1428 aa11.82□□□□□ -0.52
GABRB3-217ENST00000635832 SF3B2Q13435 895 aaKnown RBP11.82□□□□□ -0.52
GABRB3-217ENST00000635832 ANO2Q9NQ90 1003 aa11.81□□□□□ -0.52
GABRB3-217ENST00000635832 FBXO3Q9UK99 471 aa11.81□□□□□ -0.52
GABRB3-217ENST00000635832 TDRD9Q8NDG6 1382 aaKnown RBP11.81□□□□□ -0.52
GABRB3-217ENST00000635832 E9PSI1 815 aa11.81□□□□□ -0.52
GABRB3-217ENST00000635832 RRP12Q5JTH9 1297 aaKnown RBP11.81□□□□□ -0.52
GABRB3-217ENST00000635832 FOXD4L5Q5VV16 416 aaPredicted RBP11.81□□□□□ -0.52
GABRB3-217ENST00000635832 FOXD4L4Q8WXT5 416 aaPredicted RBP11.81□□□□□ -0.52
GABRB3-217ENST00000635832 ELL2O00472 640 aaPredicted RBP11.8□□□□□ -0.52
GABRB3-217ENST00000635832 XBP1P17861 261 aa11.8□□□□□ -0.52
GABRB3-217ENST00000635832 SAMD1Q6SPF0 538 aaPredicted RBP11.8□□□□□ -0.52
GABRB3-217ENST00000635832 ERC2O15083 957 aa11.79□□□□□ -0.52
GABRB3-217ENST00000635832 ARID3AQ99856 593 aa11.79□□□□□ -0.52
GABRB3-217ENST00000635832 MYBBP1AQ9BQG0 1328 aaKnown RBP11.79□□□□□ -0.52
GABRB3-217ENST00000635832 DIAPH1O60610 1272 aaKnown RBP11.79□□□□□ -0.52
GABRB3-217ENST00000635832 RALYLQ86SE5 291 aaKnown RBP11.79□□□□□ -0.52
GABRB3-217ENST00000635832 PAF1Q8N7H5 531 aa11.79□□□□□ -0.52
GABRB3-217ENST00000635832 JPH4Q96JJ6 628 aa11.78□□□□□ -0.52
GABRB3-217ENST00000635832 CENPQQ7L2Z9 268 aaPredicted RBP11.78□□□□□ -0.52
GABRB3-217ENST00000635832 RRP7AQ9Y3A4 280 aaKnown RBP11.78□□□□□ -0.52
GABRB3-217ENST00000635832 DDX49Q9Y6V7 483 aaKnown RBP11.78□□□□□ -0.52
GABRB3-217ENST00000635832 CCDC173Q0VFZ6 552 aa11.78□□□□□ -0.52
GABRB3-217ENST00000635832 MINK1Q8N4C8 1332 aaPredicted RBP11.78□□□□□ -0.52
GABRB3-217ENST00000635832 EPS15P42566 896 aa11.78□□□□□ -0.52
GABRB3-217ENST00000635832 IKQ13123 557 aaPredicted RBP11.77□□□□□ -0.53
GABRB3-217ENST00000635832 TMEM132AQ24JP5 1023 aa11.77□□□□□ -0.53
GABRB3-217ENST00000635832 DDX19BQ9UMR2 479 aa11.77□□□□□ -0.53
GABRB3-217ENST00000635832 BICD2Q8TD16 824 aa11.77□□□□□ -0.53
GABRB3-217ENST00000635832 CYB5RLQ6IPT4 315 aa11.77□□□□□ -0.53
GABRB3-217ENST00000635832 L3MBTL2Q969R5 705 aa11.77□□□□□ -0.53
GABRB3-217ENST00000635832 RAB3GAP2Q9H2M9 1393 aa11.77□□□□□ -0.53
GABRB3-217ENST00000635832 HMGB2P26583 209 aaKnown RBP11.76□□□□□ -0.53
GABRB3-217ENST00000635832 FKBP5Q13451 457 aaPredicted RBP11.76□□□□□ -0.53
GABRB3-217ENST00000635832 CCDC27Q2M243 656 aa11.76□□□□□ -0.53
GABRB3-217ENST00000635832 OSCARQ8IYS5 282 aa11.76□□□□□ -0.53
GABRB3-217ENST00000635832 RBM19Q9Y4C8 960 aaKnown RBP11.76□□□□□ -0.53
GABRB3-217ENST00000635832 OFD1O75665 1012 aa11.76□□□□□ -0.53
GABRB3-217ENST00000635832 RIC3Q7Z5B4 369 aa11.76□□□□□ -0.53
GABRB3-217ENST00000635832 RUFY1Q96T51 708 aa11.76□□□□□ -0.53
GABRB3-217ENST00000635832 SLC3A2P08195 630 aaKnown RBP11.76□□□□□ -0.53
GABRB3-217ENST00000635832 NAP1L1P55209 391 aaKnown RBP11.76□□□□□ -0.53
GABRB3-217ENST00000635832 PANK3Q9H999 370 aa11.76□□□□□ -0.53
GABRB3-217ENST00000635832 SMARCA2P51531 1590 aa11.75□□□□□ -0.53
GABRB3-217ENST00000635832 AK7Q96M32 723 aa11.75□□□□□ -0.53
GABRB3-217ENST00000635832 PATL2C9JE40 543 aaKnown RBP11.75□□□□□ -0.53
GABRB3-217ENST00000635832 ZFYVE27Q5T4F4 411 aa11.75□□□□□ -0.53
GABRB3-217ENST00000635832 IPO9Q96P70 1041 aaKnown RBP11.75□□□□□ -0.53
GABRB3-217ENST00000635832 SART3Q15020 963 aaKnown RBP11.75□□□□□ -0.53
GABRB3-217ENST00000635832 ACBD3Q9H3P7 528 aa11.75□□□□□ -0.53
GABRB3-217ENST00000635832 CCDC73Q6ZRK6 1079 aa11.74□□□□□ -0.53
GABRB3-217ENST00000635832 NLRP2Q9NX02 1062 aa11.74□□□□□ -0.53
GABRB3-217ENST00000635832 TBC1D2BQ9UPU7 963 aa11.74□□□□□ -0.53
GABRB3-217ENST00000635832 CECR2Q9BXF3 1484 aa11.74□□□□□ -0.53
GABRB3-217ENST00000635832 MYO6Q9UM54 1294 aa11.74□□□□□ -0.53
GABRB3-217ENST00000635832 WASHC4Q2M389 1173 aa11.74□□□□□ -0.53
GABRB3-217ENST00000635832 HSP90AB2PQ58FF8 381 aa11.74□□□□□ -0.53
GABRB3-217ENST00000635832 HOMER1Q86YM7 354 aa11.73□□□□□ -0.53
GABRB3-217ENST00000635832 TSPYL4Q9UJ04 414 aa11.73□□□□□ -0.53
GABRB3-217ENST00000635832 GNAI1P63096 354 aa11.73□□□□□ -0.53
GABRB3-217ENST00000635832 NEUROD6Q96NK8 337 aa11.73□□□□□ -0.53
GABRB3-217ENST00000635832 SASS6Q6UVJ0 657 aa11.73□□□□□ -0.53
GABRB3-217ENST00000635832 SMC3Q9UQE7 1217 aa11.73□□□□□ -0.53
GABRB3-217ENST00000635832 PTPRGP23470 1445 aa11.73□□□□□ -0.53
GABRB3-217ENST00000635832 FYB1O15117 783 aa11.72□□□□□ -0.53
GABRB3-217ENST00000635832 FAM161AQ3B820 660 aa11.72□□□□□ -0.53
GABRB3-217ENST00000635832 TEX35Q5T0J7 233 aa11.72□□□□□ -0.53
GABRB3-217ENST00000635832 MIA2Q96PC5 1412 aa11.72□□□□□ -0.53
GABRB3-217ENST00000635832 KIF6Q6ZMV9 814 aa11.72□□□□□ -0.53
GABRB3-217ENST00000635832 OLFM4Q6UX06 510 aa11.71□□□□□ -0.53
GABRB3-217ENST00000635832 GPRASP1Q5JY77 1395 aa11.71□□□□□ -0.53
GABRB3-217ENST00000635832 RIPK4P57078 832 aa11.71□□□□□ -0.53
GABRB3-217ENST00000635832 INTS3Q68E01 1043 aaKnown RBP11.71□□□□□ -0.53
GABRB3-217ENST00000635832 NECTIN2Q92692 538 aa11.71□□□□□ -0.53
GABRB3-217ENST00000635832 STAC3Q96MF2 364 aa11.71□□□□□ -0.53
GABRB3-217ENST00000635832 KANK4Q5T7N3 995 aaPredicted RBP11.71□□□□□ -0.54
GABRB3-217ENST00000635832 ZNF592Q92610 1267 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms