RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 NUTM2DQ5VT03 806 aaPredicted RBP14.27□□□□□ -0.12
COL11A1-211ENST00000635193 NUCB2P80303 420 aa14.27□□□□□ -0.13
COL11A1-211ENST00000635193 APPP05067 770 aa14.26□□□□□ -0.13
COL11A1-211ENST00000635193 ARGLU1Q9NWB6 273 aaPredicted RBP14.26□□□□□ -0.13
COL11A1-211ENST00000635193 ISY1Q9ULR0 285 aaKnown RBP14.26□□□□□ -0.13
COL11A1-211ENST00000635193 CLSTN1O94985 981 aa14.25□□□□□ -0.13
COL11A1-211ENST00000635193 RBM10P98175 930 aaKnown RBP14.25□□□□□ -0.13
COL11A1-211ENST00000635193 MCTP1Q6DN14 999 aa14.25□□□□□ -0.13
COL11A1-211ENST00000635193 FAM184AQ8NB25 1140 aa14.25□□□□□ -0.13
COL11A1-211ENST00000635193 CREBRFQ8IUR6 639 aa14.25□□□□□ -0.13
COL11A1-211ENST00000635193 BRD4O60885 1362 aaPredicted RBP14.25□□□□□ -0.13
COL11A1-211ENST00000635193 FRAT2O75474 233 aaPredicted RBP14.24□□□□□ -0.13
COL11A1-211ENST00000635193 AAMPQ13685 434 aa14.24□□□□□ -0.13
COL11A1-211ENST00000635193 ZNF330Q9Y3S2 320 aaPredicted RBP14.24□□□□□ -0.13
COL11A1-211ENST00000635193 KIF21BO75037 1637 aa14.24□□□□□ -0.13
COL11A1-211ENST00000635193 FGD6Q6ZV73 1430 aa14.24□□□□□ -0.13
COL11A1-211ENST00000635193 TRAK2O60296 914 aa14.24□□□□□ -0.13
COL11A1-211ENST00000635193 CCDC70Q6NSX1 233 aa14.23□□□□□ -0.13
COL11A1-211ENST00000635193 HOMER1Q86YM7 354 aa14.23□□□□□ -0.13
COL11A1-211ENST00000635193 PANK1Q8TE04 598 aa14.23□□□□□ -0.13
COL11A1-211ENST00000635193 IFT57Q9NWB7 429 aa14.23□□□□□ -0.13
COL11A1-211ENST00000635193 RUNDC1Q96C34 613 aa14.22□□□□□ -0.13
COL11A1-211ENST00000635193 RASSF8Q8NHQ8 419 aa14.22□□□□□ -0.13
COL11A1-211ENST00000635193 LNPKQ9C0E8 428 aa14.22□□□□□ -0.13
COL11A1-211ENST00000635193 AMPHP49418 695 aa14.22□□□□□ -0.13
COL11A1-211ENST00000635193 TAF7LQ5H9L4 462 aa14.22□□□□□ -0.13
COL11A1-211ENST00000635193 INTS3Q68E01 1043 aaKnown RBP14.21□□□□□ -0.13
COL11A1-211ENST00000635193 API5Q9BZZ5 524 aaKnown RBP14.21□□□□□ -0.13
COL11A1-211ENST00000635193 CWC15Q9P013 229 aaKnown RBP14.21□□□□□ -0.13
COL11A1-211ENST00000635193 EVC2Q86UK5 1308 aa14.21□□□□□ -0.13
COL11A1-211ENST00000635193 PATL2C9JE40 543 aaKnown RBP14.21□□□□□ -0.14
COL11A1-211ENST00000635193 HMGN5P82970 282 aaKnown RBP14.21□□□□□ -0.14
COL11A1-211ENST00000635193 CSB-PGBD3P0DP91 1061 aa14.2□□□□□ -0.14
COL11A1-211ENST00000635193 CCDC173Q0VFZ6 552 aa14.2□□□□□ -0.14
COL11A1-211ENST00000635193 CHMP4CQ96CF2 233 aa14.2□□□□□ -0.14
COL11A1-211ENST00000635193 CDCA7LQ96GN5 454 aa14.2□□□□□ -0.14
COL11A1-211ENST00000635193 WASHC2CQ9Y4E1 1318 aa14.2□□□□□ -0.14
COL11A1-211ENST00000635193 RIPK4P57078 832 aa14.2□□□□□ -0.14
COL11A1-211ENST00000635193 MNS1Q8NEH6 495 aa14.2□□□□□ -0.14
COL11A1-211ENST00000635193 TPM1P09493 284 aa14.2□□□□□ -0.14
COL11A1-211ENST00000635193 RUFY2Q8WXA3 655 aa14.2□□□□□ -0.14
COL11A1-211ENST00000635193 TSR1Q2NL82 804 aaKnown RBP14.19□□□□□ -0.14
COL11A1-211ENST00000635193 BACH2Q9BYV9 841 aa14.19□□□□□ -0.14
COL11A1-211ENST00000635193 AKNAQ7Z591 1439 aa14.19□□□□□ -0.14
COL11A1-211ENST00000635193 ANO2Q9NQ90 1003 aa14.19□□□□□ -0.14
COL11A1-211ENST00000635193 ZKSCAN1P17029 563 aaPredicted RBP14.19□□□□□ -0.14
COL11A1-211ENST00000635193 MYOM3Q5VTT5 1437 aa14.18□□□□□ -0.14
COL11A1-211ENST00000635193 ADAMTS8Q9UP79 889 aa14.18□□□□□ -0.14
COL11A1-211ENST00000635193 LRRC9Q6ZRR7 1453 aa14.18□□□□□ -0.14
COL11A1-211ENST00000635193 DIAPH1O60610 1272 aaKnown RBP14.18□□□□□ -0.14
COL11A1-211ENST00000635193 ROCK1Q13464 1354 aa14.18□□□□□ -0.14
COL11A1-211ENST00000635193 MIA2Q96PC5 1412 aa14.18□□□□□ -0.14
COL11A1-211ENST00000635193 ACBD3Q9H3P7 528 aa14.18□□□□□ -0.14
COL11A1-211ENST00000635193 TPD52L1Q16890 204 aaPredicted RBP14.17□□□□□ -0.14
COL11A1-211ENST00000635193 NGDNQ8NEJ9 315 aaKnown RBP14.17□□□□□ -0.14
COL11A1-211ENST00000635193 TOMM22Q9NS69 142 aa14.17□□□□□ -0.14
COL11A1-211ENST00000635193 BICD2Q8TD16 824 aa14.17□□□□□ -0.14
COL11A1-211ENST00000635193 CUX1P39880 1505 aa14.17□□□□□ -0.14
COL11A1-211ENST00000635193 HSP90B2PQ58FF3 399 aa14.17□□□□□ -0.14
COL11A1-211ENST00000635193 LTV1Q96GA3 475 aaPredicted RBP14.17□□□□□ -0.14
COL11A1-211ENST00000635193 COG3Q96JB2 828 aa14.16□□□□□ -0.14
COL11A1-211ENST00000635193 PES1O00541 588 aaKnown RBP14.16□□□□□ -0.14
COL11A1-211ENST00000635193 CDC45O75419 566 aa14.16□□□□□ -0.14
COL11A1-211ENST00000635193 RNF214Q8ND24 703 aa14.16□□□□□ -0.14
COL11A1-211ENST00000635193 SMC3Q9UQE7 1217 aa14.16□□□□□ -0.14
COL11A1-211ENST00000635193 PDE4CQ08493 712 aa14.15□□□□□ -0.14
COL11A1-211ENST00000635193 VPS37CA5D8V6 355 aaPredicted RBP14.15□□□□□ -0.14
COL11A1-211ENST00000635193 RRBP1Q9P2E9 1410 aaKnown RBP14.15□□□□□ -0.14
COL11A1-211ENST00000635193 TRHP20396 242 aaPredicted RBP14.14□□□□□ -0.15
COL11A1-211ENST00000635193 SASS6Q6UVJ0 657 aa14.14□□□□□ -0.15
COL11A1-211ENST00000635193 UBE2Q2Q8WVN8 375 aa14.14□□□□□ -0.15
COL11A1-211ENST00000635193 CAVIN1Q6NZI2 390 aaKnown RBP14.13□□□□□ -0.15
COL11A1-211ENST00000635193 FANCD2Q9BXW9 1451 aa14.13□□□□□ -0.15
COL11A1-211ENST00000635193 SMG6Q86US8 1419 aaKnown RBP14.13□□□□□ -0.15
COL11A1-211ENST00000635193 VGFO15240 615 aaPredicted RBP14.13□□□□□ -0.15
COL11A1-211ENST00000635193 PDZRN3Q9UPQ7 1066 aa14.13□□□□□ -0.15
COL11A1-211ENST00000635193 CCDC9Q9Y3X0 531 aaKnown RBP14.13□□□□□ -0.15
COL11A1-211ENST00000635193 JPH4Q96JJ6 628 aa14.13□□□□□ -0.15
COL11A1-211ENST00000635193 AK7Q96M32 723 aa14.13□□□□□ -0.15
COL11A1-211ENST00000635193 BCL11BQ9C0K0 894 aaPredicted RBP14.13□□□□□ -0.15
COL11A1-211ENST00000635193 NUTM2FA1L443 756 aa14.12□□□□□ -0.15
COL11A1-211ENST00000635193 ESPNB1AK53 854 aa14.12□□□□□ -0.15
COL11A1-211ENST00000635193 CEP89Q96ST8 783 aa14.12□□□□□ -0.15
COL11A1-211ENST00000635193 UQCRHLA0A096LP55 91 aa14.12□□□□□ -0.15
COL11A1-211ENST00000635193 UQCRHP07919 91 aa14.12□□□□□ -0.15
COL11A1-211ENST00000635193 IPO7O95373 1038 aaKnown RBP14.12□□□□□ -0.15
COL11A1-211ENST00000635193 GRPEL1Q9HAV7 217 aa14.12□□□□□ -0.15
COL11A1-211ENST00000635193 RNF20Q5VTR2 975 aa14.11□□□□□ -0.15
COL11A1-211ENST00000635193 IFIT2P09913 472 aaKnown RBP14.11□□□□□ -0.15
COL11A1-211ENST00000635193 GNAI1P63096 354 aa14.11□□□□□ -0.15
COL11A1-211ENST00000635193 RUFY1Q96T51 708 aa14.11□□□□□ -0.15
COL11A1-211ENST00000635193 H0YHG0 523 aa14.11□□□□□ -0.15
COL11A1-211ENST00000635193 IGF1RP08069 1367 aa14.11□□□□□ -0.15
COL11A1-211ENST00000635193 MINK1Q8N4C8 1332 aaPredicted RBP14.1□□□□□ -0.15
COL11A1-211ENST00000635193 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.1□□□□□ -0.15
COL11A1-211ENST00000635193 MBD3O95983 291 aa14.1□□□□□ -0.15
COL11A1-211ENST00000635193 RDXP35241 583 aaKnown RBP14.1□□□□□ -0.15
COL11A1-211ENST00000635193 PDE3AQ14432 1141 aa14.1□□□□□ -0.15
COL11A1-211ENST00000635193 C9orf78Q9NZ63 289 aaPredicted RBP14.1□□□□□ -0.15
COL11A1-211ENST00000635193 NCBP3Q53F19 620 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms