RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-223ENST00000634435 UPF1Q92900 1129 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMARCA2-223ENST00000634435 DISP1Q96F81 1524 aa11.1□□□□□ -0.63
SMARCA2-223ENST00000634435 TBC1D12O60347 775 aa11.1□□□□□ -0.63
SMARCA2-223ENST00000634435 HIC1Q14526 733 aa11.1□□□□□ -0.63
SMARCA2-223ENST00000634435 AMHR2Q16671 573 aa11.1□□□□□ -0.63
SMARCA2-223ENST00000634435 CCDC102AQ96A19 550 aa11.1□□□□□ -0.63
SMARCA2-223ENST00000634435 TEX14Q8IWB6 1497 aa11.1□□□□□ -0.63
SMARCA2-223ENST00000634435 PPRC1Q5VV67 1664 aaKnown RBP11.1□□□□□ -0.63
SMARCA2-223ENST00000634435 EPRSP07814 1512 aaKnown RBP11.09□□□□□ -0.63
SMARCA2-223ENST00000634435 IRF6O14896 467 aa11.09□□□□□ -0.63
SMARCA2-223ENST00000634435 FCHSD2O94868 740 aa11.09□□□□□ -0.63
SMARCA2-223ENST00000634435 KDM5BQ9UGL1 1544 aa11.09□□□□□ -0.63
SMARCA2-223ENST00000634435 TMEM92Q6UXU6 159 aa11.08□□□□□ -0.64
SMARCA2-223ENST00000634435 HOMEZQ8IX15 550 aa11.08□□□□□ -0.64
SMARCA2-223ENST00000634435 COL17A1Q9UMD9 1497 aaPredicted RBP11.07□□□□□ -0.64
SMARCA2-223ENST00000634435 MARVELD3Q96A59 401 aa11.07□□□□□ -0.64
SMARCA2-223ENST00000634435 ZNF316A6NFI3 1004 aaPredicted RBP11.06□□□□□ -0.64
SMARCA2-223ENST00000634435 DDRGK1Q96HY6 314 aa11.06□□□□□ -0.64
SMARCA2-223ENST00000634435 RAPGEF2Q9Y4G8 1499 aa11.06□□□□□ -0.64
SMARCA2-223ENST00000634435 KIAA0556O60303 1618 aa11.06□□□□□ -0.64
SMARCA2-223ENST00000634435 MAP3K4Q9Y6R4 1608 aa11.06□□□□□ -0.64
SMARCA2-223ENST00000634435 UGGT2Q9NYU1 1516 aa11.05□□□□□ -0.64
SMARCA2-223ENST00000634435 DDX12PQ92771 950 aa11.05□□□□□ -0.64
SMARCA2-223ENST00000634435 WDR7Q9Y4E6 1490 aa11.05□□□□□ -0.64
SMARCA2-223ENST00000634435 EVI5O60447 810 aa11.04□□□□□ -0.64
SMARCA2-223ENST00000634435 FAM117AQ9C073 453 aa11.04□□□□□ -0.64
SMARCA2-223ENST00000634435 ZCCHC11Q5TAX3 1644 aaKnown RBP11.04□□□□□ -0.64
SMARCA2-223ENST00000634435 PARP9Q8IXQ6 854 aa11.03□□□□□ -0.64
SMARCA2-223ENST00000634435 HECW2Q9P2P5 1572 aa11.03□□□□□ -0.64
SMARCA2-223ENST00000634435 PTGDRQ13258 359 aa11.01□□□□□ -0.65
SMARCA2-223ENST00000634435 PTCD2Q8WV60 388 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-223ENST00000634435 PLEKHG3A1L390 1219 aa10.99□□□□□ -0.65
SMARCA2-223ENST00000634435 FECHP22830 423 aa10.99□□□□□ -0.65
SMARCA2-223ENST00000634435 CD109Q6YHK3 1445 aa10.99□□□□□ -0.65
SMARCA2-223ENST00000634435 SLC34A2O95436 690 aa10.98□□□□□ -0.65
SMARCA2-223ENST00000634435 PRIM1P49642 420 aaKnown RBP10.98□□□□□ -0.65
SMARCA2-223ENST00000634435 C3orf67Q6ZVT6 689 aa10.98□□□□□ -0.65
SMARCA2-223ENST00000634435 ANO8Q9HCE9 1232 aaPredicted RBP10.98□□□□□ -0.65
SMARCA2-223ENST00000634435 GOLGA3Q08378 1498 aa10.98□□□□□ -0.65
SMARCA2-223ENST00000634435 EMP3P54852 163 aa10.97□□□□□ -0.65
SMARCA2-223ENST00000634435 KCNH8Q96L42 1107 aa10.97□□□□□ -0.65
SMARCA2-223ENST00000634435 ZMYND15Q9H091 742 aa10.97□□□□□ -0.65
SMARCA2-223ENST00000634435 MAGI3Q5TCQ9 1506 aa10.97□□□□□ -0.65
SMARCA2-223ENST00000634435 GOPCQ9HD26 462 aa10.96□□□□□ -0.65
SMARCA2-223ENST00000634435 TTLL12Q14166 644 aaPredicted RBP10.95□□□□□ -0.66
SMARCA2-223ENST00000634435 ABCA8O94911 1581 aa10.94□□□□□ -0.66
SMARCA2-223ENST00000634435 EPAS1Q99814 870 aa10.94□□□□□ -0.66
SMARCA2-223ENST00000634435 CFAP43Q8NDM7 1665 aa10.93□□□□□ -0.66
SMARCA2-223ENST00000634435 PHF14O94880 888 aa10.93□□□□□ -0.66
SMARCA2-223ENST00000634435 EN1Q05925 392 aaPredicted RBP10.93□□□□□ -0.66
SMARCA2-223ENST00000634435 RSPH6AQ9H0K4 717 aa10.93□□□□□ -0.66
SMARCA2-223ENST00000634435 ARID3CA6NKF2 412 aa10.92□□□□□ -0.66
SMARCA2-223ENST00000634435 CTTNBP2Q8WZ74 1663 aa10.92□□□□□ -0.66
SMARCA2-223ENST00000634435 HS3ST6Q96QI5 342 aa10.91□□□□□ -0.66
SMARCA2-223ENST00000634435 GIGYF2Q6Y7W6 1299 aaKnown RBP10.9□□□□□ -0.66
SMARCA2-223ENST00000634435 KIF21BO75037 1637 aa10.9□□□□□ -0.66
SMARCA2-223ENST00000634435 FAM205CA6NFA0 338 aa10.89□□□□□ -0.67
SMARCA2-223ENST00000634435 FAM9AQ8IZU1 332 aaPredicted RBP10.89□□□□□ -0.67
SMARCA2-223ENST00000634435 KRTAP3-3Q9BYR6 98 aa10.89□□□□□ -0.67
SMARCA2-223ENST00000634435 KRTAP3-2Q9BYR7 98 aa10.89□□□□□ -0.67
SMARCA2-223ENST00000634435 ARAP3Q8WWN8 1544 aa10.89□□□□□ -0.67
SMARCA2-223ENST00000634435 PRXQ9BXM0 1461 aa10.88□□□□□ -0.67
SMARCA2-223ENST00000634435 POTEB3A0JP26 581 aa10.88□□□□□ -0.67
SMARCA2-223ENST00000634435 MAP3K7O43318 606 aa10.88□□□□□ -0.67
SMARCA2-223ENST00000634435 FLIIQ13045 1269 aa10.88□□□□□ -0.67
SMARCA2-223ENST00000634435 POTEBQ6S5H4 581 aa10.88□□□□□ -0.67
SMARCA2-223ENST00000634435 CDHR5Q9HBB8 845 aa10.88□□□□□ -0.67
SMARCA2-223ENST00000634435 NPDC1Q9NQX5 325 aaPredicted RBP10.88□□□□□ -0.67
SMARCA2-223ENST00000634435 MS4A1P11836 297 aa10.86□□□□□ -0.67
SMARCA2-223ENST00000634435 CLCN1P35523 988 aa10.86□□□□□ -0.67
SMARCA2-223ENST00000634435 TYW1BQ6NUM6 668 aa10.85□□□□□ -0.67
SMARCA2-223ENST00000634435 TMUB1Q9BVT8 246 aa10.85□□□□□ -0.67
SMARCA2-223ENST00000634435 PCDHGA10Q9Y5H3 936 aa10.85□□□□□ -0.67
SMARCA2-223ENST00000634435 PHLDB1Q86UU1 1377 aa10.85□□□□□ -0.67
SMARCA2-223ENST00000634435 ATP10BO94823 1461 aa10.85□□□□□ -0.67
SMARCA2-223ENST00000634435 PTPRMP28827 1452 aa10.85□□□□□ -0.67
SMARCA2-223ENST00000634435 RAPGEF3O95398 923 aa10.84□□□□□ -0.67
SMARCA2-223ENST00000634435 FBXO41Q8TF61 875 aa10.84□□□□□ -0.67
SMARCA2-223ENST00000634435 FBXW7Q969H0 707 aa10.84□□□□□ -0.67
SMARCA2-223ENST00000634435 PCMTD1Q96MG8 357 aaPredicted RBP10.84□□□□□ -0.67
SMARCA2-223ENST00000634435 REPIN1Q9BWE0 567 aaKnown RBP10.83□□□□□ -0.68
SMARCA2-223ENST00000634435 GPCPD1Q9NPB8 672 aa10.83□□□□□ -0.68
SMARCA2-223ENST00000634435 ABCA9Q8IUA7 1624 aa10.83□□□□□ -0.68
SMARCA2-223ENST00000634435 ARID4BQ4LE39 1312 aaPredicted RBP10.83□□□□□ -0.68
SMARCA2-223ENST00000634435 NEO1Q92859 1461 aa10.82□□□□□ -0.68
SMARCA2-223ENST00000634435 PCDHGA4Q9Y5G9 962 aa10.82□□□□□ -0.68
SMARCA2-223ENST00000634435 SH3D19Q5HYK7 790 aa10.81□□□□□ -0.68
SMARCA2-223ENST00000634435 RBM33Q96EV2 1170 aaKnown RBP10.81□□□□□ -0.68
SMARCA2-223ENST00000634435 ADAMTSL3P82987 1691 aa10.8□□□□□ -0.68
SMARCA2-223ENST00000634435 ONECUT3O60422 494 aaPredicted RBP10.8□□□□□ -0.68
SMARCA2-223ENST00000634435 TSR1Q2NL82 804 aaKnown RBP10.8□□□□□ -0.68
SMARCA2-223ENST00000634435 CERKQ8TCT0 537 aa10.8□□□□□ -0.68
SMARCA2-223ENST00000634435 PCF11O94913 1555 aaKnown RBP10.79□□□□□ -0.68
SMARCA2-223ENST00000634435 FRMPD1Q5SYB0 1578 aa10.79□□□□□ -0.68
SMARCA2-223ENST00000634435 MDM2Q00987 491 aaPredicted RBP10.79□□□□□ -0.68
SMARCA2-223ENST00000634435 RAPGEF6Q8TEU7 1601 aa10.79□□□□□ -0.68
SMARCA2-223ENST00000634435 ARHGEF40Q8TER5 1519 aa10.79□□□□□ -0.68
SMARCA2-223ENST00000634435 SAMD9Q5K651 1589 aa10.78□□□□□ -0.68
SMARCA2-223ENST00000634435 MADDQ8WXG6 1647 aa10.78□□□□□ -0.68
SMARCA2-223ENST00000634435 OATP04181 439 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms