RNA–Protein interactions for RNA: ENST00000634343.1

SMARCA2-221, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-221ENST00000634343 NPDC1Q9NQX5 325 aaPredicted RBP12.25□□□□□ -0.45
SMARCA2-221ENST00000634343 PDZRN3Q9UPQ7 1066 aa12.25□□□□□ -0.45
SMARCA2-221ENST00000634343 ZPR1O75312 459 aa12.21□□□□□ -0.45
SMARCA2-221ENST00000634343 EYA1Q99502 592 aa12.21□□□□□ -0.45
SMARCA2-221ENST00000634343 PCDHB3Q9Y5E6 796 aa12.19□□□□□ -0.46
SMARCA2-221ENST00000634343 ZNF787Q6DD87 383 aa12.18□□□□□ -0.46
SMARCA2-221ENST00000634343 DNAJB2P25686 324 aa12.13□□□□□ -0.47
SMARCA2-221ENST00000634343 RBM46Q8TBY0 533 aaKnown RBP12.13□□□□□ -0.47
SMARCA2-221ENST00000634343 SLC19A1P41440 591 aa12.12□□□□□ -0.47
SMARCA2-221ENST00000634343 P3H3Q8IVL6 736 aa12.12□□□□□ -0.47
SMARCA2-221ENST00000634343 ARHGEF1Q92888 912 aaKnown RBP12.12□□□□□ -0.47
SMARCA2-221ENST00000634343 KMT5BQ4FZB7 885 aa12.1□□□□□ -0.47
SMARCA2-221ENST00000634343 BLOC1S3Q6QNY0 202 aa12.1□□□□□ -0.47
SMARCA2-221ENST00000634343 RNF223E7ERA6 249 aa12.09□□□□□ -0.47
SMARCA2-221ENST00000634343 PTGDRQ13258 359 aa12.08□□□□□ -0.48
SMARCA2-221ENST00000634343 TMEM134Q9H6X4 195 aa12.07□□□□□ -0.48
SMARCA2-221ENST00000634343 ACTN4O43707 911 aaKnown RBP12.06□□□□□ -0.48
SMARCA2-221ENST00000634343 MLLT3P42568 568 aaPredicted RBP12.06□□□□□ -0.48
SMARCA2-221ENST00000634343 ANKLE1Q8NAG6 615 aa12.06□□□□□ -0.48
SMARCA2-221ENST00000634343 PKDCCQ504Y2 493 aa12.05□□□□□ -0.48
SMARCA2-221ENST00000634343 ZNF598Q86UK7 904 aaKnown RBP12.05□□□□□ -0.48
SMARCA2-221ENST00000634343 DGAT1O75907 488 aa12.04□□□□□ -0.48
SMARCA2-221ENST00000634343 SPRYD7Q5W111 196 aa12.04□□□□□ -0.48
SMARCA2-221ENST00000634343 ADGRG1Q9Y653 693 aa12.03□□□□□ -0.48
SMARCA2-221ENST00000634343 RCCD1A6NED2 376 aa12.02□□□□□ -0.49
SMARCA2-221ENST00000634343 PRR20EP86478 221 aa12.02□□□□□ -0.49
SMARCA2-221ENST00000634343 PRR20CP86479 221 aa12.02□□□□□ -0.49
SMARCA2-221ENST00000634343 PRR20DP86480 221 aa12.02□□□□□ -0.49
SMARCA2-221ENST00000634343 PRR20BP86481 221 aa12.02□□□□□ -0.49
SMARCA2-221ENST00000634343 PRR20AP86496 221 aa12.02□□□□□ -0.49
SMARCA2-221ENST00000634343 TRIM67Q6ZTA4 783 aa12.02□□□□□ -0.49
SMARCA2-221ENST00000634343 NUTM2FA1L443 756 aa12.01□□□□□ -0.49
SMARCA2-221ENST00000634343 NR1I2O75469 434 aa12.01□□□□□ -0.49
SMARCA2-221ENST00000634343 TLL1O43897 1013 aa12□□□□□ -0.49
SMARCA2-221ENST00000634343 S1PR4O95977 384 aa12□□□□□ -0.49
SMARCA2-221ENST00000634343 CFHP08603 1231 aa12□□□□□ -0.49
SMARCA2-221ENST00000634343 ZNF775Q96BV0 537 aaPredicted RBP11.99□□□□□ -0.49
SMARCA2-221ENST00000634343 RSPH4AQ5TD94 716 aa11.98□□□□□ -0.49
SMARCA2-221ENST00000634343 EMID1Q96A84 441 aaPredicted RBP11.98□□□□□ -0.49
SMARCA2-221ENST00000634343 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.97□□□□□ -0.49
SMARCA2-221ENST00000634343 PPEF1O14829 653 aaPredicted RBP11.97□□□□□ -0.49
SMARCA2-221ENST00000634343 ADH1BP00325 375 aa11.97□□□□□ -0.49
SMARCA2-221ENST00000634343 ZNF697Q5TEC3 545 aa11.97□□□□□ -0.49
SMARCA2-221ENST00000634343 FCHSD2O94868 740 aa11.96□□□□□ -0.49
SMARCA2-221ENST00000634343 MYT1Q01538 1121 aa11.96□□□□□ -0.49
SMARCA2-221ENST00000634343 LIAT1Q6ZQX7 453 aa11.96□□□□□ -0.49
SMARCA2-221ENST00000634343 KCNV2Q8TDN2 545 aa11.96□□□□□ -0.49
SMARCA2-221ENST00000634343 OATP04181 439 aa11.95□□□□□ -0.5
SMARCA2-221ENST00000634343 SLC6A16Q9GZN6 736 aa11.95□□□□□ -0.5
SMARCA2-221ENST00000634343 FAM161AQ3B820 660 aa11.93□□□□□ -0.5
SMARCA2-221ENST00000634343 FAM187AA6NFU0 413 aa11.92□□□□□ -0.5
SMARCA2-221ENST00000634343 SLC10A3P09131 477 aa11.92□□□□□ -0.5
SMARCA2-221ENST00000634343 SCUBE3Q8IX30 993 aa11.91□□□□□ -0.5
SMARCA2-221ENST00000634343 GDF9O60383 454 aa11.9□□□□□ -0.5
SMARCA2-221ENST00000634343 TNFRSF10AO00220 468 aa11.89□□□□□ -0.51
SMARCA2-221ENST00000634343 PXYLP1Q8TE99 480 aa11.88□□□□□ -0.51
SMARCA2-221ENST00000634343 LMOD2Q6P5Q4 547 aa11.87□□□□□ -0.51
SMARCA2-221ENST00000634343 SPSB2Q99619 263 aa11.87□□□□□ -0.51
SMARCA2-221ENST00000634343 HIC1Q14526 733 aa11.84□□□□□ -0.51
SMARCA2-221ENST00000634343 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMARCA2-221ENST00000634343 TULP1O00294 542 aaPredicted RBP11.83□□□□□ -0.52
SMARCA2-221ENST00000634343 PUS10Q3MIT2 529 aaKnown RBP11.83□□□□□ -0.52
SMARCA2-221ENST00000634343 PLA2G2CQ5R387 149 aa11.83□□□□□ -0.52
SMARCA2-221ENST00000634343 POTECB2RU33 542 aa11.82□□□□□ -0.52
SMARCA2-221ENST00000634343 METTL3Q86U44 580 aaKnown RBP11.82□□□□□ -0.52
SMARCA2-221ENST00000634343 CD2BP2O95400 341 aaKnown RBP11.81□□□□□ -0.52
SMARCA2-221ENST00000634343 RPIAP49247 311 aa11.81□□□□□ -0.52
SMARCA2-221ENST00000634343 SEMA3EO15041 775 aa11.8□□□□□ -0.52
SMARCA2-221ENST00000634343 FOXC1Q12948 553 aa11.8□□□□□ -0.52
SMARCA2-221ENST00000634343 AAASQ9NRG9 546 aa11.8□□□□□ -0.52
SMARCA2-221ENST00000634343 SMYD5Q6GMV2 418 aa11.78□□□□□ -0.52
SMARCA2-221ENST00000634343 RDH13Q8NBN7 331 aa11.78□□□□□ -0.52
SMARCA2-221ENST00000634343 PKD2L1Q9P0L9 805 aa11.78□□□□□ -0.52
SMARCA2-221ENST00000634343 DAXXQ9UER7 740 aaPredicted RBP11.78□□□□□ -0.52
SMARCA2-221ENST00000634343 ST8SIA5O15466 376 aa11.76□□□□□ -0.53
SMARCA2-221ENST00000634343 TMEM132AQ24JP5 1023 aa11.76□□□□□ -0.53
SMARCA2-221ENST00000634343 FMNL1O95466 1100 aaPredicted RBP11.75□□□□□ -0.53
SMARCA2-221ENST00000634343 ATP6V1AP38606 617 aa11.75□□□□□ -0.53
SMARCA2-221ENST00000634343 MORN1Q5T089 497 aa11.75□□□□□ -0.53
SMARCA2-221ENST00000634343 GNPATO15228 680 aa11.74□□□□□ -0.53
SMARCA2-221ENST00000634343 TREML4Q6UXN2 200 aa11.74□□□□□ -0.53
SMARCA2-221ENST00000634343 CYP4X1Q8N118 509 aa11.74□□□□□ -0.53
SMARCA2-221ENST00000634343 CRIPAKQ8N1N5 446 aa11.74□□□□□ -0.53
SMARCA2-221ENST00000634343 FCF1Q9Y324 198 aaKnown RBP11.74□□□□□ -0.53
SMARCA2-221ENST00000634343 SULF1Q8IWU6 871 aa11.73□□□□□ -0.53
SMARCA2-221ENST00000634343 DDX11L8A8MPP1 907 aa11.72□□□□□ -0.53
SMARCA2-221ENST00000634343 FUT2Q10981 343 aa11.72□□□□□ -0.53
SMARCA2-221ENST00000634343 SALL2Q9Y467 1007 aaPredicted RBP11.72□□□□□ -0.53
SMARCA2-221ENST00000634343 GTF3C3Q9Y5Q9 886 aa11.72□□□□□ -0.53
SMARCA2-221ENST00000634343 ZBTB24O43167 697 aaPredicted RBP11.71□□□□□ -0.53
SMARCA2-221ENST00000634343 THAP11Q96EK4 314 aa11.71□□□□□ -0.53
SMARCA2-221ENST00000634343 TOR4AQ9NXH8 423 aa11.71□□□□□ -0.53
SMARCA2-221ENST00000634343 AXIN1O15169 862 aa11.7□□□□□ -0.54
SMARCA2-221ENST00000634343 AVPP01185 164 aa11.7□□□□□ -0.54
SMARCA2-221ENST00000634343 CTC1Q2NKJ3 1217 aa11.7□□□□□ -0.54
SMARCA2-221ENST00000634343 TESPA1A2RU30 521 aaPredicted RBP11.69□□□□□ -0.54
SMARCA2-221ENST00000634343 GRIPAP1Q4V328 841 aa11.69□□□□□ -0.54
SMARCA2-221ENST00000634343 ERICH6Q7L0X2 663 aa11.69□□□□□ -0.54
SMARCA2-221ENST00000634343 SLC27A5Q9Y2P5 690 aa11.69□□□□□ -0.54
SMARCA2-221ENST00000634343 GCGRP47871 477 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms