RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 APBB1O00213 710 aa9.26□□□□□ -0.93
TRAPPC9-216ENST00000634178 RAD21O60216 631 aa9.25□□□□□ -0.93
TRAPPC9-216ENST00000634178 FAM161AQ3B820 660 aa9.25□□□□□ -0.93
TRAPPC9-216ENST00000634178 PPP4R3BQ5MIZ7 849 aa9.25□□□□□ -0.93
TRAPPC9-216ENST00000634178 CDCA7LQ96GN5 454 aa9.25□□□□□ -0.93
TRAPPC9-216ENST00000634178 CLK2P49760 499 aaKnown RBP9.24□□□□□ -0.93
TRAPPC9-216ENST00000634178 MCM6Q14566 821 aa9.24□□□□□ -0.93
TRAPPC9-216ENST00000634178 ADAM33Q9BZ11 813 aa9.24□□□□□ -0.93
TRAPPC9-216ENST00000634178 POLR3EQ9NVU0 708 aa9.24□□□□□ -0.93
TRAPPC9-216ENST00000634178 TRAK2O60296 914 aa9.23□□□□□ -0.93
TRAPPC9-216ENST00000634178 MYSM1Q5VVJ2 828 aa9.23□□□□□ -0.93
TRAPPC9-216ENST00000634178 SULF1Q8IWU6 871 aa9.22□□□□□ -0.93
TRAPPC9-216ENST00000634178 BANK1Q8NDB2 785 aa9.22□□□□□ -0.93
TRAPPC9-216ENST00000634178 KCNK17Q96T54 332 aa9.22□□□□□ -0.93
TRAPPC9-216ENST00000634178 ARID3AQ99856 593 aa9.22□□□□□ -0.93
TRAPPC9-216ENST00000634178 PROCA1Q8NCQ7 364 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC9-216ENST00000634178 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.21□□□□□ -0.94
TRAPPC9-216ENST00000634178 TBC1D2Q9BYX2 928 aa9.21□□□□□ -0.94
TRAPPC9-216ENST00000634178 VPS9D1Q9Y2B5 631 aa9.21□□□□□ -0.94
TRAPPC9-216ENST00000634178 SPDYE5A6NIY4 337 aa9.2□□□□□ -0.94
TRAPPC9-216ENST00000634178 TMEM259Q4ZIN3 620 aa9.2□□□□□ -0.94
TRAPPC9-216ENST00000634178 CLUAP1Q96AJ1 413 aa9.2□□□□□ -0.94
TRAPPC9-216ENST00000634178 BCL2L12Q9HB09 334 aa9.2□□□□□ -0.94
TRAPPC9-216ENST00000634178 NBPF26B4DH59 902 aa9.19□□□□□ -0.94
TRAPPC9-216ENST00000634178 PTPREP23469 700 aa9.19□□□□□ -0.94
TRAPPC9-216ENST00000634178 NLRP7Q8WX94 980 aa9.19□□□□□ -0.94
TRAPPC9-216ENST00000634178 ARID3CA6NKF2 412 aa9.18□□□□□ -0.94
TRAPPC9-216ENST00000634178 PPP1R3GB7ZBB8 358 aa9.18□□□□□ -0.94
TRAPPC9-216ENST00000634178 TUSC1Q2TAM9 212 aa9.18□□□□□ -0.94
TRAPPC9-216ENST00000634178 PACS2Q86VP3 889 aa9.18□□□□□ -0.94
TRAPPC9-216ENST00000634178 PROSER2Q86WR7 435 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC9-216ENST00000634178 C1orf115Q9H7X2 142 aa9.18□□□□□ -0.94
TRAPPC9-216ENST00000634178 RCCD1A6NED2 376 aa9.17□□□□□ -0.94
TRAPPC9-216ENST00000634178 DNAJB2P25686 324 aa9.17□□□□□ -0.94
TRAPPC9-216ENST00000634178 NUTM1Q86Y26 1132 aa9.17□□□□□ -0.94
TRAPPC9-216ENST00000634178 IFFO2Q5TF58 517 aa9.16□□□□□ -0.94
TRAPPC9-216ENST00000634178 RIC3Q7Z5B4 369 aa9.16□□□□□ -0.94
TRAPPC9-216ENST00000634178 KCNH8Q96L42 1107 aa9.16□□□□□ -0.94
TRAPPC9-216ENST00000634178 EYA1Q99502 592 aa9.16□□□□□ -0.94
TRAPPC9-216ENST00000634178 PRM3Q9NNZ6 103 aa9.16□□□□□ -0.94
TRAPPC9-216ENST00000634178 BHMG1C9JSJ3 638 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC9-216ENST00000634178 GJA5P36382 358 aa9.15□□□□□ -0.94
TRAPPC9-216ENST00000634178 RFC5P40937 340 aa9.15□□□□□ -0.94
TRAPPC9-216ENST00000634178 PTPN5P54829 565 aa9.15□□□□□ -0.94
TRAPPC9-216ENST00000634178 RSPH4AQ5TD94 716 aa9.15□□□□□ -0.94
TRAPPC9-216ENST00000634178 PPP2R2DQ66LE6 453 aa9.15□□□□□ -0.94
TRAPPC9-216ENST00000634178 WWC1Q8IX03 1113 aa9.15□□□□□ -0.94
TRAPPC9-216ENST00000634178 SLC4A5Q9BY07 1137 aa9.15□□□□□ -0.94
TRAPPC9-216ENST00000634178 CD46P15529 392 aa9.14□□□□□ -0.95
TRAPPC9-216ENST00000634178 THSD4Q6ZMP0 1018 aa9.14□□□□□ -0.95
TRAPPC9-216ENST00000634178 SPIRE2Q8WWL2 714 aa9.14□□□□□ -0.95
TRAPPC9-216ENST00000634178 NUDT18Q6ZVK8 323 aa9.13□□□□□ -0.95
TRAPPC9-216ENST00000634178 DDX11L8A8MPP1 907 aa9.12□□□□□ -0.95
TRAPPC9-216ENST00000634178 TRIM6-TRIM34B2RNG4 842 aa9.12□□□□□ -0.95
TRAPPC9-216ENST00000634178 SPTLC1O15269 473 aa9.12□□□□□ -0.95
TRAPPC9-216ENST00000634178 COL9A1P20849 921 aa9.12□□□□□ -0.95
TRAPPC9-216ENST00000634178 TATDN2Q93075 761 aa9.12□□□□□ -0.95
TRAPPC9-216ENST00000634178 TSKSQ9UJT2 592 aa9.12□□□□□ -0.95
TRAPPC9-216ENST00000634178 SERPINA10Q9UK55 444 aa9.12□□□□□ -0.95
TRAPPC9-216ENST00000634178 PNMA3Q9UL41 463 aa9.12□□□□□ -0.95
TRAPPC9-216ENST00000634178 A0A0G2JS52 829 aa9.11□□□□□ -0.95
TRAPPC9-216ENST00000634178 SOCS7O14512 581 aa9.11□□□□□ -0.95
TRAPPC9-216ENST00000634178 RGS20O76081 388 aa9.11□□□□□ -0.95
TRAPPC9-216ENST00000634178 CCDC82Q8N4S0 544 aa9.11□□□□□ -0.95
TRAPPC9-216ENST00000634178 CCDC97Q96F63 343 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC9-216ENST00000634178 STAC3Q96MF2 364 aa9.11□□□□□ -0.95
TRAPPC9-216ENST00000634178 TMEM134Q9H6X4 195 aa9.11□□□□□ -0.95
TRAPPC9-216ENST00000634178 FNBP4Q8N3X1 1017 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC9-216ENST00000634178 ZBED2Q9BTP6 218 aa9.1□□□□□ -0.95
TRAPPC9-216ENST00000634178 FAM198AQ9UFP1 575 aa9.1□□□□□ -0.95
TRAPPC9-216ENST00000634178 LIMD1Q9UGP4 676 aa9.1□□□□□ -0.95
TRAPPC9-216ENST00000634178 USP46P62068 366 aa9.09□□□□□ -0.95
TRAPPC9-216ENST00000634178 RSBN1LQ6PCB5 846 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC9-216ENST00000634178 ZNF777Q9ULD5 760 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC9-216ENST00000634178 COG6Q9Y2V7 657 aa9.09□□□□□ -0.95
TRAPPC9-216ENST00000634178 ABCC9O60706 1549 aa9.09□□□□□ -0.95
TRAPPC9-216ENST00000634178 RDH13Q8NBN7 331 aa9.08□□□□□ -0.96
TRAPPC9-216ENST00000634178 SLC4A3P48751 1232 aa9.07□□□□□ -0.96
TRAPPC9-216ENST00000634178 PRPF38BQ5VTL8 546 aaKnown RBP9.07□□□□□ -0.96
TRAPPC9-216ENST00000634178 POM121Q96HA1 1249 aa9.07□□□□□ -0.96
TRAPPC9-216ENST00000634178 ZNF330Q9Y3S2 320 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC9-216ENST00000634178 PDIA4P13667 645 aaKnown RBP9.06□□□□□ -0.96
TRAPPC9-216ENST00000634178 HDGFP51858 240 aaKnown RBP9.06□□□□□ -0.96
TRAPPC9-216ENST00000634178 IRX2Q9BZI1 471 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC9-216ENST00000634178 SNRKQ9NRH2 765 aa9.06□□□□□ -0.96
TRAPPC9-216ENST00000634178 PODXL2Q9NZ53 605 aa9.06□□□□□ -0.96
TRAPPC9-216ENST00000634178 MOXD2PA6NHM9 499 aa9.05□□□□□ -0.96
TRAPPC9-216ENST00000634178 NUTM2BA6NNL0 878 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC9-216ENST00000634178 NUTM2EB1AL46 878 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC9-216ENST00000634178 KDM4AO75164 1064 aa9.05□□□□□ -0.96
TRAPPC9-216ENST00000634178 NUTM2DQ5VT03 806 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC9-216ENST00000634178 NUTM2AQ8IVF1 878 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC9-216ENST00000634178 WNT2BQ93097 391 aa9.05□□□□□ -0.96
TRAPPC9-216ENST00000634178 LILRB3O75022 631 aa9.04□□□□□ -0.96
TRAPPC9-216ENST00000634178 CSPP1Q1MSJ5 1256 aa9.03□□□□□ -0.96
TRAPPC9-216ENST00000634178 AP1G2O75843 785 aa9.02□□□□□ -0.97
TRAPPC9-216ENST00000634178 MRPL50Q8N5N7 158 aaKnown RBP9.02□□□□□ -0.97
TRAPPC9-216ENST00000634178 ZBTB3Q9H5J0 574 aa9.02□□□□□ -0.97
TRAPPC9-216ENST00000634178 NDUFV2P19404 249 aa9.01□□□□□ -0.97
TRAPPC9-216ENST00000634178 GCGRP47871 477 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms