RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 DHX29Q7Z478 1369 aaKnown RBP8.5□□□□□ -1.05
LINC00550-202ENST00000629570 KIF15Q9NS87 1388 aa8.5□□□□□ -1.05
LINC00550-202ENST00000629570 IER5LQ5T953 404 aa8.5□□□□□ -1.05
LINC00550-202ENST00000629570 FBXO3Q9UK99 471 aa8.5□□□□□ -1.05
LINC00550-202ENST00000629570 CHIC2Q9UKJ5 165 aa8.5□□□□□ -1.05
LINC00550-202ENST00000629570 RIMS1Q86UR5 1692 aaKnown RBP8.49□□□□□ -1.05
LINC00550-202ENST00000629570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.49□□□□□ -1.05
LINC00550-202ENST00000629570 NCOA1Q15788 1441 aa8.49□□□□□ -1.05
LINC00550-202ENST00000629570 FER1L4A9Z1Z3 1794 aa8.49□□□□□ -1.05
LINC00550-202ENST00000629570 ITGAEP38570 1179 aa8.49□□□□□ -1.05
LINC00550-202ENST00000629570 LCE2DQ5TA82 110 aaPredicted RBP8.49□□□□□ -1.05
LINC00550-202ENST00000629570 TMEM106CQ9BVX2 250 aa8.49□□□□□ -1.05
LINC00550-202ENST00000629570 RRP7BPQ9NSQ0 103 aa8.49□□□□□ -1.05
LINC00550-202ENST00000629570 ADGRL2O95490 1459 aa8.49□□□□□ -1.05
LINC00550-202ENST00000629570 PTPRMP28827 1452 aa8.49□□□□□ -1.05
LINC00550-202ENST00000629570 ANKRD30AQ9BXX3 1397 aa8.48□□□□□ -1.05
LINC00550-202ENST00000629570 DCAF8Q5TAQ9 597 aa8.48□□□□□ -1.05
LINC00550-202ENST00000629570 DUOX2Q9NRD8 1548 aa8.48□□□□□ -1.05
LINC00550-202ENST00000629570 KIF3BO15066 747 aa8.47□□□□□ -1.05
LINC00550-202ENST00000629570 GGT6Q6P531 493 aa8.47□□□□□ -1.05
LINC00550-202ENST00000629570 ERBINQ96RT1 1412 aa8.46□□□□□ -1.05
LINC00550-202ENST00000629570 PYGBP11216 843 aa8.46□□□□□ -1.06
LINC00550-202ENST00000629570 FAM163AQ96GL9 167 aaPredicted RBP8.46□□□□□ -1.06
LINC00550-202ENST00000629570 MROH1Q8NDA8 1641 aa8.46□□□□□ -1.06
LINC00550-202ENST00000629570 RNF17Q9BXT8 1623 aaKnown RBP8.46□□□□□ -1.06
LINC00550-202ENST00000629570 EIF2AK4Q9P2K8 1649 aaKnown RBP8.46□□□□□ -1.06
LINC00550-202ENST00000629570 ROCK1Q13464 1354 aa8.45□□□□□ -1.06
LINC00550-202ENST00000629570 CLTCQ00610 1675 aaKnown RBP8.44□□□□□ -1.06
LINC00550-202ENST00000629570 CEBPAP49715 358 aaPredicted RBP8.44□□□□□ -1.06
LINC00550-202ENST00000629570 CNTLNQ9NXG0 1405 aa8.44□□□□□ -1.06
LINC00550-202ENST00000629570 ANKRD50Q9ULJ7 1429 aa8.44□□□□□ -1.06
LINC00550-202ENST00000629570 PRDM15P57071 1507 aaPredicted RBP8.44□□□□□ -1.06
LINC00550-202ENST00000629570 KDM5DQ9BY66 1539 aa8.44□□□□□ -1.06
LINC00550-202ENST00000629570 ESF1Q9H501 851 aaKnown RBP8.43□□□□□ -1.06
LINC00550-202ENST00000629570 ABCC3O15438 1527 aa8.43□□□□□ -1.06
LINC00550-202ENST00000629570 DEPDC5O75140 1603 aa8.43□□□□□ -1.06
LINC00550-202ENST00000629570 C3P01024 1663 aa8.43□□□□□ -1.06
LINC00550-202ENST00000629570 VASPP50552 380 aaPredicted RBP8.42□□□□□ -1.06
LINC00550-202ENST00000629570 PCDHB8Q9UN66 801 aa8.42□□□□□ -1.06
LINC00550-202ENST00000629570 MROH2AA6NES4 1674 aa8.42□□□□□ -1.06
LINC00550-202ENST00000629570 FAM135AQ9P2D6 1515 aa8.41□□□□□ -1.06
LINC00550-202ENST00000629570 ZMYM3Q14202 1370 aa8.41□□□□□ -1.06
LINC00550-202ENST00000629570 WASHC2CQ9Y4E1 1318 aa8.41□□□□□ -1.06
LINC00550-202ENST00000629570 PLCG2P16885 1265 aa8.41□□□□□ -1.06
LINC00550-202ENST00000629570 HFM1A2PYH4 1435 aa8.4□□□□□ -1.06
LINC00550-202ENST00000629570 NAIPQ13075 1403 aa8.4□□□□□ -1.06
LINC00550-202ENST00000629570 IRX5P78411 483 aaPredicted RBP8.4□□□□□ -1.06
LINC00550-202ENST00000629570 KLHL34Q8N239 644 aa8.4□□□□□ -1.06
LINC00550-202ENST00000629570 CEP152O94986 1710 aa8.4□□□□□ -1.07
LINC00550-202ENST00000629570 ZC3H13Q5T200 1668 aaKnown RBP8.4□□□□□ -1.07
LINC00550-202ENST00000629570 VWDEQ8N2E2 1590 aa8.39□□□□□ -1.07
LINC00550-202ENST00000629570 GCC2Q8IWJ2 1684 aa8.39□□□□□ -1.07
LINC00550-202ENST00000629570 UNC13BO14795 1591 aa8.39□□□□□ -1.07
LINC00550-202ENST00000629570 PZPP20742 1482 aa8.38□□□□□ -1.07
LINC00550-202ENST00000629570 LMTK3Q96Q04 1460 aa8.38□□□□□ -1.07
LINC00550-202ENST00000629570 PCDH10Q9P2E7 1040 aa8.38□□□□□ -1.07
LINC00550-202ENST00000629570 CAMSAP1Q5T5Y3 1602 aa8.38□□□□□ -1.07
LINC00550-202ENST00000629570 NPATQ14207 1427 aa8.37□□□□□ -1.07
LINC00550-202ENST00000629570 KANK1Q14678 1352 aa8.37□□□□□ -1.07
LINC00550-202ENST00000629570 FBXO31Q5XUX0 539 aaPredicted RBP8.37□□□□□ -1.07
LINC00550-202ENST00000629570 SLAIN1Q8ND83 568 aa8.37□□□□□ -1.07
LINC00550-202ENST00000629570 LMTK2Q8IWU2 1503 aa8.37□□□□□ -1.07
LINC00550-202ENST00000629570 EFCAB6Q5THR3 1501 aa8.36□□□□□ -1.07
LINC00550-202ENST00000629570 GSE1Q14687 1217 aa8.36□□□□□ -1.07
LINC00550-202ENST00000629570 PREX1Q8TCU6 1659 aa8.36□□□□□ -1.07
LINC00550-202ENST00000629570 UHRF1BP1Q6BDS2 1440 aa8.36□□□□□ -1.07
LINC00550-202ENST00000629570 MYO3AQ8NEV4 1616 aa8.36□□□□□ -1.07
LINC00550-202ENST00000629570 ERVK-7P63135 1459 aa8.35□□□□□ -1.07
LINC00550-202ENST00000629570 HSPA2P54652 639 aa8.35□□□□□ -1.07
LINC00550-202ENST00000629570 OCEL1Q9H607 264 aa8.35□□□□□ -1.07
LINC00550-202ENST00000629570 IQGAP3Q86VI3 1631 aa8.35□□□□□ -1.07
LINC00550-202ENST00000629570 ARHGAP31Q2M1Z3 1444 aa8.35□□□□□ -1.07
LINC00550-202ENST00000629570 SPATA31D1Q6ZQQ2 1576 aa8.35□□□□□ -1.07
LINC00550-202ENST00000629570 NUP155O75694 1391 aa8.35□□□□□ -1.07
LINC00550-202ENST00000629570 TNRQ92752 1358 aa8.35□□□□□ -1.07
LINC00550-202ENST00000629570 TET3O43151 1660 aa8.34□□□□□ -1.08
LINC00550-202ENST00000629570 ZNF467Q7Z7K2 595 aaPredicted RBP8.33□□□□□ -1.08
LINC00550-202ENST00000629570 CEP170BQ9Y4F5 1589 aaPredicted RBP8.33□□□□□ -1.08
LINC00550-202ENST00000629570 SETD1BQ9UPS6 1966 aaKnown RBP8.32□□□□□ -1.08
LINC00550-202ENST00000629570 ZNF142P52746 1687 aaPredicted RBP8.32□□□□□ -1.08
LINC00550-202ENST00000629570 RPRD2Q5VT52 1461 aaKnown RBP8.32□□□□□ -1.08
LINC00550-202ENST00000629570 SYNMO15061 1565 aa8.31□□□□□ -1.08
LINC00550-202ENST00000629570 E9PCH4 1651 aa8.31□□□□□ -1.08
LINC00550-202ENST00000629570 NOS1P29475 1434 aa8.31□□□□□ -1.08
LINC00550-202ENST00000629570 SETD5Q9C0A6 1442 aa8.31□□□□□ -1.08
LINC00550-202ENST00000629570 RAB3GAP2Q9H2M9 1393 aa8.31□□□□□ -1.08
LINC00550-202ENST00000629570 A2ML1A8K2U0 1454 aa8.31□□□□□ -1.08
LINC00550-202ENST00000629570 NLRP1Q9C000 1473 aa8.31□□□□□ -1.08
LINC00550-202ENST00000629570 CHRM1P11229 460 aaPredicted RBP8.3□□□□□ -1.08
LINC00550-202ENST00000629570 TRIM52Q96A61 297 aa8.3□□□□□ -1.08
LINC00550-202ENST00000629570 CFAP65Q6ZU64 1925 aaKnown RBP8.3□□□□□ -1.08
LINC00550-202ENST00000629570 ST18O60284 1047 aa8.29□□□□□ -1.08
LINC00550-202ENST00000629570 UGGT1Q9NYU2 1555 aa8.29□□□□□ -1.08
LINC00550-202ENST00000629570 PDCD7Q8N8D1 485 aaKnown RBP8.28□□□□□ -1.08
LINC00550-202ENST00000629570 PIK3C2BO00750 1634 aa8.28□□□□□ -1.08
LINC00550-202ENST00000629570 PSEN1P49768 467 aa8.27□□□□□ -1.09
LINC00550-202ENST00000629570 PKD2Q13563 968 aa8.27□□□□□ -1.09
LINC00550-202ENST00000629570 IDI1Q13907 227 aa8.27□□□□□ -1.09
LINC00550-202ENST00000629570 IFNLR1Q8IU57 520 aaPredicted RBP8.27□□□□□ -1.09
LINC00550-202ENST00000629570 PLA2R1Q13018 1463 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms